CsGy3G006215 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G006215
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 5266174 .. 5266374 (+)
RNA-Seq ExpressionCsGy3G006215
SyntenyCsGy3G006215
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGACTTTATGCAAAATTACCTTTACTATTCCAAAGGCAAAAGCAAGTCAAAACCATTCCTGTACTGCCATGGGAACTGGGATGGGGATGCTACAAAACTACAAAGGTTGGCAGAATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACAACATGCGGCAACTTCAGGAGTTCTCGATAGTGGAACCATGTAG

mRNA sequence

ATGACAGACTTTATGCAAAATTACCTTTACTATTCCAAAGGCAAAAGCAAGTCAAAACCATTCCTGTACTGCCATGGGAACTGGGATGGGGATGCTACAAAACTACAAAGGTTGGCAGAATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACAACATGCGGCAACTTCAGGAGTTCTCGATAGTGGAACCATGTAG

Coding sequence (CDS)

ATGACAGACTTTATGCAAAATTACCTTTACTATTCCAAAGGCAAAAGCAAGTCAAAACCATTCCTGTACTGCCATGGGAACTGGGATGGGGATGCTACAAAACTACAAAGGTTGGCAGAATTGTGGAGAGCTTCCCTTTGTTTGGAAATTCAAACACAACATGCGGCAACTTCAGGAGTTCTCGATAGTGGAACCATGTAG

Protein sequence

MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGVLDSGTM*
Homology
[Close]
BLAST of CsGy3G006215 vs. NCBI nr
Match: KGN56234.1 (hypothetical protein Csa_009767 [Cucumis sativus])

HSP 1 Score: 141 bits (356), Expect = 2.07e-42
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV 60
          MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV
Sbjct: 1  MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV 60

Query: 61 LDSGTM 66
          LDSGTM
Sbjct: 61 LDSGTM 66

[Close]
BLAST of CsGy3G006215 vs. ExPASy TrEMBL
Match: A0A0A0L5C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104870 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 1.00e-42
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV 60
          MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV
Sbjct: 1  MTDFMQNYLYYSKGKSKSKPFLYCHGNWDGDATKLQRLAELWRASLCLEIQTQHAATSGV 60

Query: 61 LDSGTM 66
          LDSGTM
Sbjct: 61 LDSGTM 66

The following BLAST results are available for this feature:
BLAST of CsGy3G006215 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G006215 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56234.12.07e-42100.00hypothetical protein Csa_009767 [Cucumis sativus][more]
BLAST of CsGy3G006215 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5C11.00e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104870 PE=4 SV=1[more]
BLAST of CsGy3G006215 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G006215.1CsGy3G006215.1mRNA