CsGy3G005820 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G005820
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L24
Location	Gy14Chr3: 4885076 .. 4890000 (+)
RNA-Seq Expression	CsGy3G005820
Synteny	CsGy3G005820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTACACAACTTCTTTCTATCCGTCTTCGCTATTTTGCAGTTTGCAATTGCTTATCCATTTGTTCTCAGTTCGCGGAGCCAAGCCTACAGCACCAAAAATGGCAGCCATGGCTGCGCTTCAGAGCTCCATGACCGCTCTATCCCTCTCTTCCAATTCCTTCCTCGGCCAACGCCTTCCGCCGCCCACAATTTATGCTGCCCCCGTAAGATTTTCTACTCTTCCCTTCCTTCCTAATTGCTTCCTTATTGTGCTTCATTTTACCTTGTTTTATATACTATCTGTAACCATCCCTATTCAAATGAAAGTACATTTCCTCATCACTTCCAAGAAGTAATTGGATCATGTTTCAGGAACTAATATGCAAGAATAAATCAAATTTAAGAATTTCGTCAAATTTTACTCAAACCACATTTCCCTCCAAACCTTTGAAATTGTTAACTACTTCCCATCCCATAGTTGCTTTAGGTTCCAAGCTAACGAAAATTGCGTTACTTGCTGTTCATATTTGAGCTTATTTTGTGTTCCATCTTGTTGAAGTAATTTTCAGGATAGTTTGTATCTAAGTATCTCTTGTTTAACTTGCAGATAACGTCAAAAGAGAAGCCATGTCTCATAGTAATGAAGGTTAGTATTCTTTCCTTTTAACGATTTCGTTCTTTTTCAACTCATTTAAATTTAATGGAGATAATGTACGTTCTATCTTGAGTATATTTGGTGGAAAATAAATGATGACGTGAAACAGCAAGTTGGATTGTTGACTTGCTGAGAAAAATGATATACCTGCTGCTACATTGTGATATGATAATGTATTGTGGTCAAAGTAAGCTTAGGCGTACACTAATTGACATAACCTTTCATTCTGTAAGTGGAAGGTTCGATACTCTATCCCCACAATTGTTGTACTAAAAGAAAAAGATAATGTATTGTGATTGAATCATTTTAGAATGTCTCTTTCATTAAGCAATCTTCCTTCTAAGAGGCTAATTTATAAGATTTTCATTGTAGCTATTTGATGAAGTACTATCAAATGCTTCTTGGACAGTGCTTCTAAATTATAGCCAAGCATACAACTTAGGAACTCAAGGACACAGTTATACAACCTATACCTATAGAATAGATCCTGTTCAAGTGAGATCTTCACCTTTGATATGGAAGTTTTGTTCACCATTAAAAACCTCCTTTCACAGTTAAAAGCAGCCCCAAGCATTCTTATACACCCAACTATCAATTATATGTTTTACAATTATATTAGGGAAATTGCAATTTAAGAATAAGATATTTAAAGTGTGTCACATGTTTTCTATTTTGCAACTATGACACTTTTTAGTGTATGAAGTGTATGGAGTATATATTAATAGTGGATCAAGTGTATTTCAGTAGTTACTAGAGTGTTGTGTCCGTACTTTTTTGAAATTTCACAGGCTGAGCTTGTTTTTTACTGTTTTGCAGAAGTAATTAGTTTGGGCTATGCATCTAATTGTTAAAACTTATTCTGCCAAATTTCCAAGAAGACCTTTATATTATAATTGTTCGTAAGGCTTCTTTCCTGGAATGGTCGTTGAACTCTCCCTTCTAAATGAACTCAACCACAAAAGTAAACGTTTATAGTGATATGTTTGATGTTTCTGTTCTTGCATTTCTTCTATTTGGCATGATATCAAAATTGTGAAGAAATAATTGGTAATTCTACGACTGTTTCCCCCATATTTACTTCTTAAATTTATTTTCTTATTGGCAGCTTAAAAGATGGGAACGGAAGGAATGCAAGCCAAACAGCCTTCCAGTAGTACACAAAATGCATGTTAAGATTGGAGACACAGTGAAAGTTATAGCTGGTCGTGATAAGGGAAAAATTGGAGAAATCACCAAAATCTTTAAACATAATAGCAAAGTGGTAGTCAACGAAATAAATCTGAAGACAAAGCATGTGAAGAGCAGAGAGGAGGAAGAACAAGGACAGATTATTAAGGTTTGTTTCTGCTCTTTGTAACAAATTCAAATCATCAACTATTGTCTATACAAAATGAAACTTTATCATCAACCAGCAAACTCCTACACTCTCAAGAAAATGAAATTCATCTGGGTGCGTCAAAAAGTGACCAATACTTTAGTGTTAACTGGATTCTGTATTTGATTAGTTCTTCACCCCATAGTCCAATTTCTTTTTGTCAACTTTCATCACTTGGTTTGGATATTTCAGATCGAAGCACCCATCCACAGCTCCAATGTGATGCTTTACTCAAAAGAGCAGGATGTAGTGAGCCGGGTTGGTCACAAAGTTCTTGAAGATGGAAAACGAGTACGTTACCTCATAAAAACTGGGGAAATAATTGACAGCACTGAAAATTGGAAAAAATTGAAGGAAGCGAATAGCAAAACTGAAGTGGCTACAACTGCCTGAGAATCGTTTTTCAATTGTACCTACCACTGATGTAGTTATGTTGAAGGGTATTTCAATATCCCATTATCTTTTTTCAGCAAATATTTTTGTTGCGGTCTTTTTGTTCATTGATGCATAGTAAAGTAATATCGCTTTGGTAGTTTCTTGTTTATTAATAATCTATAACATATTGAGACGTATATATATATAATATATCTATATCCTCAATTATTTTTAATCGGTTCATCAAAAAAATGCTAGAAGGAGAATTTTTCGTTTGCTCTTTTAAACACGTATATGTATGTGTGTATGTATTCTAAGAAGCTCATGCATGGGACATGGAGGTGGTGAGTTTTGAAATTCTAGTCTCCCGATTGTTTGCTAAAACTACGCTTGAACCAAAATGAGGTTGTGGAATGAAAGCAGACACATTATTGAAAATTAATGTTCTGATTCTTTCATTCGTTTGCTTCCCATGTCTAGATATGTCTCCTATTTCTATCTCTCAGTTTCCTTCCACTTCTCCCACTCCTACCCCCTGCTGATTTTATACCATCTACTGTTGAGTTTAATGTATAGGGTTCAACTGCATCAACAAAAACAATTTTGACACCATTGTTACCCTCACCCTTAAATCTGTTTTTTCTACTCTGGACTAATTGATCCTTTATCTGATAATGTCGATTCTCCATAGTTCTGTGAAATATCTCCTTTCTTTTCAAGGCTTTTATCCTGTATGTTTTTATGTGTTTCTTCATACTTTCACCGGTTGCTCCACCCTGTCTAGTTGTTAATTCATCAGATTTTACAAATATTGGCACAAATACACTGTAATTTCTATGATTCATCAATATTTTCTATACCTTCATACCTTATTGTCCTCAATTTTTTCTCGTGGCCGCTCTTGTCTAACTCTGCTTTTTTCTTCGTAGGTTGCAATTGTCTTCTTCACAATTTTTGCAATGACTACTGCTCTTGTCTTTAACTATAAGGTTTTTAACGAAAACAAACTGCTATCCTAGTCTTTCATTTTCATTTCTTCGTTTTCATCTTAACAACTACATTAGATGCTTCCATGTAGTTCCTCAAAAGTAAAAAAGCAGTGAACATCTGTTAAAAATAAATATTAGAATGCAGATATGTTTAAAACGGTTAGAGATTTGGAATTGGCTATATATTTGTTTATGGTTGCTGGAGTTTGTTTTTGGATTGTCTCGGAAGTTCTCTTTCTCACGATGTCATTCTTGTAGTTTTATATTTTCCTTACCTGGAAATTTTGGAGAGTTATTTTTTCTGGATTATTTCCTTGTTATGTTCCATATATTTTGAATGGGAATGCTTTCCTTTTCTATTGTGCCTTTTATTTGCAAGAGATTGCTTGTTATGGTTACGGCTTTTGCTTTTGTTGCAGATGCAGAAATCATTTAATAATATAATTACAAATTTACAAATTACAACAAACCAAACTATATATATTATTATATTATATTATCTCTCACTTAAATCATGGCATGTGAATTCTGATAACAACAAAAAAAGTTTAAAGCACTTTTGTTATTTTGTTCGCAGAAGAAGTCAAAACCAAAACATGAGGAACTGGTAAAAGACCATAATATATCATTCATTCAGAAAGTTTAAATTTTTCATTCTTACAAACTGTTTTTTAATTAATTTAATTTAAACATTAACAATTTCAAGATACTTTGTTGGCATTGCATTGATGCTTTTCTGAAAATCATTTTTTTTTATACTGCATTTTCCGAGATGAGGTATCCAATCTACTACTTAATTTTAAGATGAAATGTCATCTTAATAATGGTAACTTATATATAAGATATTGATAAAAATAATATTTAATTCATTTTTTATTGATTAAAAACAATGTCTTGAAAACAAAAAAAAAACATGCAAAGTTTAATTCATTTTTGTTGAAGAATTGAATATAAACAACTCACAAACAAAATCAAATGTTTAGAGAGAAAAATCACAAGAAATAATTTTTATGCTAGTGATTGAAATAATATTTTGTTGGGTCCACGTAGACATGTTTTAGGAATCATGTTGACATGTACTTAGGAACTTGATACTTTGTTTTGTGCTATTATATATAATGGAAGTGACTTTGTTTGTTTGTAAAGTTTTATTTGTAGTGTAGGTATTTTGTTTGTCATATACTTTGCGTTGGGTATTGTTATAATGATCATAGATGTTTTGTTTGCTGAGTTTTAGATTTAAGTGTGTTTGCATTTGGTGAAGGGGAAGTGATTTTGGCTTATTTTGAAAAGTTCATTTGTCTGCTTATTAAAAAGGTGAAATATGTTTGGCATGTACTTCATGCTTATGCTTATGCTTATACTTATACTTACACAGTACCTAATGAATGTTGACTAATGTTCATTTTCGACAAATTTGCAGGTAGTTGAAGAATCTATCGACTATGAGATCGATCAAGCCCACTTATGCCTTCGTTTTATTAGATTAGATCACACATAAATGTATTAACAGTTAATTTATCTTTTGGATTATCGTAAAACCTTTACCGAC

mRNA sequence

AGTACACAACTTCTTTCTATCCGTCTTCGCTATTTTGCAGTTTGCAATTGCTTATCCATTTGTTCTCAGTTCGCGGAGCCAAGCCTACAGCACCAAAAATGGCAGCCATGGCTGCGCTTCAGAGCTCCATGACCGCTCTATCCCTCTCTTCCAATTCCTTCCTCGGCCAACGCCTTCCGCCGCCCACAATTTATGCTGCCCCCATAACGTCAAAAGAGAAGCCATGTCTCATAGTAATGAAGCTTAAAAGATGGGAACGGAAGGAATGCAAGCCAAACAGCCTTCCAGTAGTACACAAAATGCATGTTAAGATTGGAGACACAGTGAAAGTTATAGCTGGTCGTGATAAGGGAAAAATTGGAGAAATCACCAAAATCTTTAAACATAATAGCAAAGTGGTAGTCAACGAAATAAATCTGAAGACAAAGCATGTGAAGAGCAGAGAGGAGGAAGAACAAGGACAGATTATTAAGATCGAAGCACCCATCCACAGCTCCAATGTGATGCTTTACTCAAAAGAGCAGGATGTAGTGAGCCGGGTTGGTCACAAAGTTCTTGAAGATGGAAAACGAGTACGTTACCTCATAAAAACTGGGGAAATAATTGACAGCACTGAAAATTGGAAAAAATTGAAGGAAGCGAATAGCAAAACTGAAGTGGCTACAACTGCCTGAGAATCGTTTTTCAATTGTACCTACCACTGATGTAGTTATGTTGAAGGGTTGCAATTGTCTTCTTCACAATTTTTGCAATGACTACTGCTCTTGTCTTTAACTATAAGGTAGTTGAAGAATCTATCGACTATGAGATCGATCAAGCCCACTTATGCCTTCGTTTTATTAGATTAGATCACACATAAATGTATTAACAGTTAATTTATCTTTTGGATTATCGTAAAACCTTTACCGAC

Coding sequence (CDS)

ATGGCAGCCATGGCTGCGCTTCAGAGCTCCATGACCGCTCTATCCCTCTCTTCCAATTCCTTCCTCGGCCAACGCCTTCCGCCGCCCACAATTTATGCTGCCCCCATAACGTCAAAAGAGAAGCCATGTCTCATAGTAATGAAGCTTAAAAGATGGGAACGGAAGGAATGCAAGCCAAACAGCCTTCCAGTAGTACACAAAATGCATGTTAAGATTGGAGACACAGTGAAAGTTATAGCTGGTCGTGATAAGGGAAAAATTGGAGAAATCACCAAAATCTTTAAACATAATAGCAAAGTGGTAGTCAACGAAATAAATCTGAAGACAAAGCATGTGAAGAGCAGAGAGGAGGAAGAACAAGGACAGATTATTAAGATCGAAGCACCCATCCACAGCTCCAATGTGATGCTTTACTCAAAAGAGCAGGATGTAGTGAGCCGGGTTGGTCACAAAGTTCTTGAAGATGGAAAACGAGTACGTTACCTCATAAAAACTGGGGAAATAATTGACAGCACTGAAAATTGGAAAAAATTGAAGGAAGCGAATAGCAAAACTGAAGTGGCTACAACTGCCTGA

Protein sequence

MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPNSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKEANSKTEVATTA*

Homology

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BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot
Match: P11893 (50S ribosomal protein L24, chloroplastic OS=Pisum sativum OX=3888 GN=RPL24 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-74
Identity = 150/192 (78.12%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 3   AMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITS---KEKPCLIVMKLKRWERKECKP 62
           AMA+LQSSM++LSLSSNSFLGQ L P T+  +P       EK CLIVMKLKRWERKECKP
Sbjct: 5   AMASLQSSMSSLSLSSNSFLGQPLSPITL--SPFLQGKPTEKKCLIVMKLKRWERKECKP 64

Query: 63  NSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEE 122
           NSLPV+HK+HVK+GDTVKVI+G +KG+IGEITKIFKHNS V+V +INLKTKHVKS +E E
Sbjct: 65  NSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKIFKHNSSVIVKDINLKTKHVKSNQEGE 124

Query: 123 QGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLK 182
            GQI K+EAPIHSSNVMLYSKE+DV SRVGHKVLE+GKRVRYLIKTGEIIDS ENWKKLK
Sbjct: 125 PGQINKVEAPIHSSNVMLYSKEKDVTSRVGHKVLENGKRVRYLIKTGEIIDSEENWKKLK 184

Query: 183 EANSKT-EVATT 191
           EAN KT EVA T
Sbjct: 185 EANKKTAEVAAT 194

[Close]

BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot
Match: P92959 (50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL24 PE=2 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 2.4e-72
Identity = 142/196 (72.45%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLS-SNSFLGQRLPPPTIYA--APITSKEKPCLIVMKLKRWERKEC 60
           MA M+ALQSS T+LSLS S+SFLGQRL  P   +  +P+   E PCL++ KLKRWERKEC
Sbjct: 1   MATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKEC 60

Query: 61  KPNSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREE 120
           KPNSLP++HKMHVK GDTVKVI+GRDKGKIGE+TKIF HNS +V+ ++NLKTKH+KSREE
Sbjct: 61  KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREE 120

Query: 121 EEQGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKK 180
            E GQI+KIEAPIHSSNVMLYSKE+DVVSRVGHKVLEDG++VRYLIKTGE+ID+ E WK 
Sbjct: 121 GEPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKL 180

Query: 181 LKEANSK--TEVATTA 192
           LKEA  K  T+VA T+
Sbjct: 181 LKEAKDKETTQVAVTS 196

[Close]

BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot
Match: P27683 (50S ribosomal protein L24, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL24 PE=1 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 6.6e-70
Identity = 136/192 (70.83%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSS T+LSLSSNSFLGQRL P        T    PCLIVM++KRWERK+CKPN
Sbjct: 1   MAAMAALQSSFTSLSLSSNSFLGQRLFPSPTTLQVKTEGHSPCLIVMRIKRWERKDCKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLP +HKMHVK+GDTVKVI+G +KGKIGEI+KI KHNS V++ ++NLKTKHVKS+EE EQ
Sbjct: 61  SLPKLHKMHVKVGDTVKVISGGEKGKIGEISKIHKHNSTVIIKDLNLKTKHVKSKEEGEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLK- 180
           GQIIKIEA IHSSNVMLYSKEQ+V SRVGHK+LEDG++VRYLIKTGEI+D+ + WK+++ 
Sbjct: 121 GQIIKIEAAIHSSNVMLYSKEQEVASRVGHKILEDGRKVRYLIKTGEIVDTPDRWKEIQN 180

Query: 181 EANSKTEVATTA 192
           +  S+T VA  A
Sbjct: 181 KKESETAVAVAA 192

[Close]

BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot
Match: Q02764 (50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL24 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.3e-69
Identity = 135/188 (71.81%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 4   MAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPNSLP 63
           MAALQSS   L   S SF GQR  PP      + S E PCLI  KLKRWERKECKPNSLP
Sbjct: 1   MAALQSSFAGL---STSFFGQRFSPPLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLP 60

Query: 64  VVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQGQI 123
           V+HKMHVK+GDTVK+I+G DKGK+GEIT+I KHNSKVVV ++NLKTKHVKSR E+E GQI
Sbjct: 61  VLHKMHVKLGDTVKIISGHDKGKVGEITEIIKHNSKVVVKDVNLKTKHVKSRSEDEPGQI 120

Query: 124 IKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKEANS 183
           +KIEAPIHSSNVMLYSKEQ V SRVGHK L++GKRVRYLIKTGEIIDS ENWKK  +   
Sbjct: 121 VKIEAPIHSSNVMLYSKEQKVASRVGHKTLDNGKRVRYLIKTGEIIDSAENWKKAVKEKE 180

Query: 184 KTEVATTA 192
           KT  A  A
Sbjct: 181 KTTEAVAA 185

[Close]

BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot
Match: B1XJS8 (50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=rplX PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-32
Identity = 67/113 (59.29%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 58  KPNSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREE 117
           + +S P  HKMHVK GDTV+VI+GRDKGK+GE+ K    +SKVVV ++N++TKHVK ++E
Sbjct: 4   RKSSTPTRHKMHVKTGDTVQVISGRDKGKVGEVIKTLPKSSKVVVKDVNIRTKHVKPQQE 63

Query: 118 EEQGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIID 171
            E GQI   EAPIHSSNVM YS+++ V SR+G+++ EDG++VR L KTGE+ID
Sbjct: 64  GESGQIQTFEAPIHSSNVMHYSEKEKVASRIGYQLTEDGRKVRVLKKTGEVID 116

[Close]

BLAST of CsGy3G005820 vs. NCBI nr
Match: XP_004149305.1 (50S ribosomal protein L24, chloroplastic [Cucumis sativus] >XP_031739317.1 50S ribosomal protein L24, chloroplastic [Cucumis sativus])

HSP 1 Score: 361 bits (926), Expect = 2.42e-125
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180

Query: 181 ANSKTEVATTA 191
           ANSK EVATTA
Sbjct: 181 ANSKAEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. NCBI nr
Match: XP_008452322.1 (PREDICTED: 50S ribosomal protein L24, chloroplastic [Cucumis melo] >KAA0046925.1 50S ribosomal protein L24 [Cucumis melo var. makuwa] >TYK03227.1 50S ribosomal protein L24 [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (905), Expect = 3.85e-122
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPP IYAAPITSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPIIYAAPITSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK+LEDGKRVRYLIKTGEIIDSTENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVTSRVGHKILEDGKRVRYLIKTGEIIDSTENWKKLKE 180

Query: 181 ANSKTEVATTA 191
           A SKTEVATTA
Sbjct: 181 AKSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. NCBI nr
Match: XP_038903308.1 (50S ribosomal protein L24, chloroplastic [Benincasa hispida])

HSP 1 Score: 348 bits (894), Expect = 1.83e-120
Identity = 180/191 (94.24%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAP+TSKEKPCLIVM+LKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPVTSKEKPCLIVMRLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKV+VNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVIVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE+GKRVRYLIKTGEIIDS ENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVENWKKLKE 180

Query: 181 ANSKTEVATTA 191
            NSKTEVATTA
Sbjct: 181 ENSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. NCBI nr
Match: XP_022142723.1 (50S ribosomal protein L24, chloroplastic [Momordica charantia])

HSP 1 Score: 333 bits (855), Expect = 1.61e-114
Identity = 173/191 (90.58%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMT+LSLSSNSFLGQRLP PTIYAAP+TSKEKPCLIVM+LKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTSLSLSSNSFLGQRLPLPTIYAAPVTSKEKPCLIVMRLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKV+V EINLKTKHVKSREEEE+
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVIVKEINLKTKHVKSREEEEK 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE G+RVRYLIKTGEIIDS ENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLESGQRVRYLIKTGEIIDSAENWKKLKE 180

Query: 181 ANSKTEVATTA 191
             SKTEVA TA
Sbjct: 181 EKSKTEVAATA 191

[Close]

BLAST of CsGy3G005820 vs. NCBI nr
Match: XP_022929523.1 (50S ribosomal protein L24, chloroplastic [Cucurbita moschata])

HSP 1 Score: 332 bits (852), Expect = 4.62e-114
Identity = 172/191 (90.05%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAM +LQSSMTALSLSS+SFLGQRL P TI+AAP+TSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMVSLQSSMTALSLSSSSFLGQRLQPSTIFAAPVTSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKV V EINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVTVKEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIK+EAPIHSSNVMLYSKE+DV SRVGHK LE+GKRVRYLIKTGEIIDST+NWKKLKE
Sbjct: 121 GQIIKVEAPIHSSNVMLYSKEKDVASRVGHKTLENGKRVRYLIKTGEIIDSTDNWKKLKE 180

Query: 181 ANSKTEVATTA 191
             SKTEVATTA
Sbjct: 181 EKSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL
Match: A0A0A0L6H1 (KOW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G098540 PE=3 SV=1)

HSP 1 Score: 361 bits (926), Expect = 1.17e-125
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180

Query: 181 ANSKTEVATTA 191
           ANSK EVATTA
Sbjct: 181 ANSKAEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL
Match: A0A5D3BUT2 (50S ribosomal protein L24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00400 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.86e-122
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPP IYAAPITSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPIIYAAPITSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK+LEDGKRVRYLIKTGEIIDSTENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVTSRVGHKILEDGKRVRYLIKTGEIIDSTENWKKLKE 180

Query: 181 ANSKTEVATTA 191
           A SKTEVATTA
Sbjct: 181 AKSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL
Match: A0A1S3BTL8 (50S ribosomal protein L24, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493382 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 1.86e-122
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMTALSLSSNSFLGQRLPPP IYAAPITSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPIIYAAPITSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK+LEDGKRVRYLIKTGEIIDSTENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVTSRVGHKILEDGKRVRYLIKTGEIIDSTENWKKLKE 180

Query: 181 ANSKTEVATTA 191
           A SKTEVATTA
Sbjct: 181 AKSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL
Match: A0A6J1CNZ8 (50S ribosomal protein L24, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012769 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 7.80e-115
Identity = 173/191 (90.58%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAMAALQSSMT+LSLSSNSFLGQRLP PTIYAAP+TSKEKPCLIVM+LKRWERKECKPN
Sbjct: 1   MAAMAALQSSMTSLSLSSNSFLGQRLPLPTIYAAPVTSKEKPCLIVMRLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKV+V EINLKTKHVKSREEEE+
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVIVKEINLKTKHVKSREEEEK 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE G+RVRYLIKTGEIIDS ENWKKLKE
Sbjct: 121 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLESGQRVRYLIKTGEIIDSAENWKKLKE 180

Query: 181 ANSKTEVATTA 191
             SKTEVA TA
Sbjct: 181 EKSKTEVAATA 191

[Close]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL
Match: A0A6J1ESD2 (50S ribosomal protein L24, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436064 PE=3 SV=1)

HSP 1 Score: 332 bits (852), Expect = 2.23e-114
Identity = 172/191 (90.05%), Postives = 182/191 (95.29%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYAAPITSKEKPCLIVMKLKRWERKECKPN 60
           MAAM +LQSSMTALSLSS+SFLGQRL P TI+AAP+TSKEKPCLIVMKLKRWERKECKPN
Sbjct: 1   MAAMVSLQSSMTALSLSSSSFLGQRLQPSTIFAAPVTSKEKPCLIVMKLKRWERKECKPN 60

Query: 61  SLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQ 120
           SLPV+HKMHVK+GDTVKVIAGRDKGKIGEITKIFKHNSKV V EINLKTKHVKSREEEEQ
Sbjct: 61  SLPVLHKMHVKVGDTVKVIAGRDKGKIGEITKIFKHNSKVTVKEINLKTKHVKSREEEEQ 120

Query: 121 GQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKKLKE 180
           GQIIK+EAPIHSSNVMLYSKE+DV SRVGHK LE+GKRVRYLIKTGEIIDST+NWKKLKE
Sbjct: 121 GQIIKVEAPIHSSNVMLYSKEKDVASRVGHKTLENGKRVRYLIKTGEIIDSTDNWKKLKE 180

Query: 181 ANSKTEVATTA 191
             SKTEVATTA
Sbjct: 181 EKSKTEVATTA 191

[Close]

BLAST of CsGy3G005820 vs. TAIR 10
Match: AT5G54600.1 (Translation protein SH3-like family protein )

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-73
Identity = 142/196 (72.45%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLS-SNSFLGQRLPPPTIYA--APITSKEKPCLIVMKLKRWERKEC 60
           MA M+ALQSS T+LSLS S+SFLGQRL  P   +  +P+   E PCL++ KLKRWERKEC
Sbjct: 1   MATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKEC 60

Query: 61  KPNSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREE 120
           KPNSLP++HKMHVK GDTVKVI+GRDKGKIGE+TKIF HNS +V+ ++NLKTKH+KSREE
Sbjct: 61  KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKTKHMKSREE 120

Query: 121 EEQGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKK 180
            E GQI+KIEAPIHSSNVMLYSKE+DVVSRVGHKVLEDG++VRYLIKTGE+ID+ E WK 
Sbjct: 121 GEPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKL 180

Query: 181 LKEANSK--TEVATTA 192
           LKEA  K  T+VA T+
Sbjct: 181 LKEAKDKETTQVAVTS 196

[Close]

BLAST of CsGy3G005820 vs. TAIR 10
Match: AT5G54600.2 (Translation protein SH3-like family protein )

HSP 1 Score: 235.7 bits (600), Expect = 3.0e-62
Identity = 129/196 (65.82%), Postives = 150/196 (76.53%), Query Frame = 0


Query: 1   MAAMAALQSSMTALSLS-SNSFLGQRLPPPTIYA--APITSKEKPCLIVMKLKRWERKEC 60
           MA M+ALQSS T+LSLS S+SFLGQRL  P   +  +P+   E PCL++ KLKRWERKEC
Sbjct: 1   MATMSALQSSFTSLSLSPSSSFLGQRLISPISLSVTSPVKPAENPCLVLAKLKRWERKEC 60

Query: 61  KPNSLPVVHKMHVKIGDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREE 120
           KPNSLP++HKMHVK GDTVKVI+GRDKGKIGE+TKIF HNS +                 
Sbjct: 61  KPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTI----------------- 120

Query: 121 EEQGQIIKIEAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTGEIIDSTENWKK 180
              GQI+KIEAPIHSSNVMLYSKE+DVVSRVGHKVLEDG++VRYLIKTGE+ID+ E WK 
Sbjct: 121 --PGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELIDTIEKWKL 177

Query: 181 LKEANSK--TEVATTA 192
           LKEA  K  T+VA T+
Sbjct: 181 LKEAKDKETTQVAVTS 177

[Close]

BLAST of CsGy3G005820 vs. TAIR 10
Match: AT5G23535.1 (KOW domain-containing protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0


Query: 69  HVKI--GDTVKVIAGRDKGKIGEITKIFKHNSKVVVNEINLKTKHVKSREEEEQGQIIKI 128
           H KI  GD V +I G+DKG+ G I ++ +  ++V+V   NL  KH+K   + E G I  +
Sbjct: 12  HWKILRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLIKKHIKGGPDHE-GGIFTV 71

Query: 129 EAPIHSSNVMLYSKEQDVVSRVGHKVLEDGKRVRYLIKTG 167
           EAP+H+SNV +         +VG K LEDG +VR    TG
Sbjct: 72  EAPLHASNVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTG 110

The following BLAST results are available for this feature:

BLAST of CsGy3G005820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11893	1.2e-74	78.13	50S ribosomal protein L24, chloroplastic OS=Pisum sativum OX=3888 GN=RPL24 PE=2 ...	[more]
P92959	2.4e-72	72.45	50S ribosomal protein L24, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL2...	[more]
P27683	6.6e-70	70.83	50S ribosomal protein L24, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL24 P...	[more]
Q02764	7.3e-69	71.81	50S ribosomal protein L24, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL24 P...	[more]
B1XJS8	1.4e-32	59.29	50S ribosomal protein L24 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / P...	[more]

BLAST of CsGy3G005820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149305.1	2.42e-125	99.48	50S ribosomal protein L24, chloroplastic [Cucumis sativus] >XP_031739317.1 50S r...	[more]
XP_008452322.1	3.85e-122	96.34	PREDICTED: 50S ribosomal protein L24, chloroplastic [Cucumis melo] >KAA0046925.1...	[more]
XP_038903308.1	1.83e-120	94.24	50S ribosomal protein L24, chloroplastic [Benincasa hispida]	[more]
XP_022142723.1	1.61e-114	90.58	50S ribosomal protein L24, chloroplastic [Momordica charantia]	[more]
XP_022929523.1	4.62e-114	90.05	50S ribosomal protein L24, chloroplastic [Cucurbita moschata]	[more]

BLAST of CsGy3G005820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6H1	1.17e-125	99.48	KOW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G098540 PE=3 SV...	[more]
A0A5D3BUT2	1.86e-122	96.34	50S ribosomal protein L24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BTL8	1.86e-122	96.34	50S ribosomal protein L24, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493382...	[more]
A0A6J1CNZ8	7.80e-115	90.58	50S ribosomal protein L24, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1ESD2	2.23e-114	90.05	50S ribosomal protein L24, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CsGy3G005820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54600.1	1.7e-73	72.45	Translation protein SH3-like family protein	[more]
AT5G54600.2	3.0e-62	65.82	Translation protein SH3-like family protein	[more]
AT5G23535.1	1.7e-12	41.00	KOW domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	SMART	SM00739	kow_9	coord: 69..96 e-value: 9.8E-7 score: 38.4
IPR005824	KOW	PFAM	PF00467	KOW	coord: 73..102 e-value: 8.2E-9 score: 35.1
IPR003256	Ribosomal protein L24	PFAM	PF17136	ribosomal_L24	coord: 105..169 e-value: 8.5E-22 score: 77.3
IPR003256	Ribosomal protein L24	TIGRFAM	TIGR01079	TIGR01079	coord: 67..169 e-value: 1.2E-34 score: 116.9
IPR003256	Ribosomal protein L24	PANTHER	PTHR12903	MITOCHONDRIAL RIBOSOMAL PROTEIN L24	coord: 4..188
IPR003256	Ribosomal protein L24	HAMAP	MF_01326_B	Ribosomal_L24_B	coord: 68..164 score: 18.681267
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 62..168 e-value: 5.2E-33 score: 115.3
None	No IPR available	PANTHER	PTHR12903:SF11	50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC	coord: 4..188
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 73..90
IPR041988	Ribosomal protein L26/L24, KOW domain	CDD	cd06089	KOW_RPL26	coord: 73..137 e-value: 2.22559E-26 score: 93.7333
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 66..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G005820.1	CsGy3G005820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0032544	plastid translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding