CsGy3G005435 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G005435
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Polyubiquitin
Location	Gy14Chr3: 4374743 .. 4376239 (-)
RNA-Seq Expression	CsGy3G005435
Synteny	CsGy3G005435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAATCTTTGTGAAAACTCTCCACAGAAAGACACTAACCCTTGAGGTTGAAAATTCTGATACTATCGAAAATGTAAAGGCTAAGATTCAAGATATAGAGGGCATCCCACCATACCAACAGAGATTAATTTTAGCTGGTAGGCAATTGGAAGATAGTAAGACTATAGCCGACTATAACATTCAAACGGAATCAGATCTCCGCGTGTTGTTGCGTCTTCGTGGAGGAATGCAAATATTTGTGAAGACCTTGACAGGAAAGACCATCACATTGGAGGTTGAGAGCTCAGACACCATTGATAACGTTAAGGCTAAAATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAAAGACTAATTTTCGCTGGAAAGCAATTGGAGGATGGACGTACACTGGCCGATTACAACATTCAAAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTTCGTGGTGGTATTTGAAACTCATCATTTCAACATGCTTATGTTCTCTGTTTTCTCTTCATGTTGCTTGTATTCTAGTCTAATCTTCTCTGTTCTACAACTCAATTTACAAATAATACTAAGTTCTATCTGCTTCTTTCCGGCTTATGATTATTCTCAATTCATTACATAAACAAGTTCCACTCAAAAACCGTAGCTCTTTTTATTTAATATAAGTAGCAGAGAGAGAAATAGTGCGATTGAGATTGACTGAATTTACTAGTCTTTTTTATTTATTTTAACATAAAGACAAAAAGCACACGACGATGTACTGCTCTCCTGTTGTTTATTGGGGTGGCGTGCGTAGCTTAAGCGCTTAGAAGTAGCATTGTTGTGGGCGCATACCGCACATGGATGGTAAGTTCTTAGCTGTCTGAAGCATCTGCGTTCTTTCTTGGCCTCGTGCTCTTCTCTGTTCTTCCATGGCAATCTCCTGCAAGAGTTCGCACCTGCACTCCTCTTCCACATTCGTGAGCTCACTGCAGCACTCATCGAAGAGCTGTCCTCCTCTCCTCCTTTGGTTGTCGATTCCACGCATCTGCAAAACATACCTGCTCTGCTGCGACAGGTACTGCCCGCAGCTGCCGATCTCCTCGCGCGCCCGCATCTGACGGCACCTCTCCATCCGCCCTGGGTTTTCTTCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGAGCATCTGCAATCACCAAAGCCAACGCCAAGAGGGCAATGATGCTTGTGAGTCTCGCCATTGTTGAAGAGTTGTATGAAGTAAAAAGAGGAGTGTATTGAAGAAGTTGAGTGAATAAGTGAGTGGTGAATGTGATTTGTATTTATAGGGGATGAGGAGTGGGTGCATGTAGGGAACGTGGAGAGAGGGAATCTGTTGTGGGGTTTTGAAGCTTGTGAAAGTACAGTAATGGTGGAGCTTCGTGATCAGTTTTGGTTGAAGTTCCACGTATGGGTTAGGCATGCAAATGAATGGGAAATAGCATGTGTCATTAGATTGGAGTTGGAAGCAGGATTTTGA

mRNA sequence

ATGCAAATCTTTGTGAAAACTCTCCACAGAAAGACACTAACCCTTGAGGTTGAAAATTCTGATACTATCGAAAATGTAAAGGCTAAGATTCAAGATATAGAGGGCATCCCACCATACCAACAGAGATTAATTTTAGCTGGTAGGCAATTGGAAGATAGTAAGACTATAGCCGACTATAACATTCAAACGGAATCAGATCTCCGCGTGTTGTTGCGTCTTCGTGGAGGAATGCAAATATTTGTGAAGACCTTGACAGGAAAGACCATCACATTGGAGGTTGAGAGCTCAGACACCATTGATAACGTTAAGGCTAAAATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAAAGACTAATTTTCGCTGGAAAGCAATTGGAGGATGGACGTACACTGGCCGATTACAACATTCAAAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTTCGTGGTGAGTTCGCACCTGCACTCCTCTTCCACATTCGTGAGCTCACTGCAGCACTCATCGAAGAGCTGTCCTCCTCTCCTCCTTTGGTTGTCGATTCCACGCATCTGCAAAACATACCTGCTCTGCTGCGACAGGTACTGCCCGCAGCTGCCGATCTCCTCGCGCGCCCGCATCTGACGGCACCTCTCCATCCGCCCTGGGTTTTCTTCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGAGCATCTGCAATCACCAAAGCCAACGCCAAGAGGGCAATGATGCTTGGGATGAGGAGTGGGTGCATGTAGGGAACGTGGAGAGAGGGAATCTGTTGTGGGGTTTTGAAGCTTGTGAAAGTACAGTAATGGTGGAGCTTCGTGATCAGTTTTGGTTGAAGTTCCACGTATGGGTTAGGCATGCAAATGAATGGGAAATAGCATGTGTCATTAGATTGGAGTTGGAAGCAGGATTTTGA

Coding sequence (CDS)

ATGCAAATCTTTGTGAAAACTCTCCACAGAAAGACACTAACCCTTGAGGTTGAAAATTCTGATACTATCGAAAATGTAAAGGCTAAGATTCAAGATATAGAGGGCATCCCACCATACCAACAGAGATTAATTTTAGCTGGTAGGCAATTGGAAGATAGTAAGACTATAGCCGACTATAACATTCAAACGGAATCAGATCTCCGCGTGTTGTTGCGTCTTCGTGGAGGAATGCAAATATTTGTGAAGACCTTGACAGGAAAGACCATCACATTGGAGGTTGAGAGCTCAGACACCATTGATAACGTTAAGGCTAAAATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAAAGACTAATTTTCGCTGGAAAGCAATTGGAGGATGGACGTACACTGGCCGATTACAACATTCAAAAGGAGTCCACCCTCCACCTTGTCCTTCGTCTTCGTGGTGAGTTCGCACCTGCACTCCTCTTCCACATTCGTGAGCTCACTGCAGCACTCATCGAAGAGCTGTCCTCCTCTCCTCCTTTGGTTGTCGATTCCACGCATCTGCAAAACATACCTGCTCTGCTGCGACAGGTACTGCCCGCAGCTGCCGATCTCCTCGCGCGCCCGCATCTGACGGCACCTCTCCATCCGCCCTGGGTTTTCTTCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGAGCATCTGCAATCACCAAAGCCAACGCCAAGAGGGCAATGATGCTTGGGATGAGGAGTGGGTGCATGTAGGGAACGTGGAGAGAGGGAATCTGTTGTGGGGTTTTGAAGCTTGTGAAAGTACAGTAATGGTGGAGCTTCGTGATCAGTTTTGGTTGAAGTTCCACGTATGGGTTAGGCATGCAAATGAATGGGAAATAGCATGTGTCATTAGATTGGAGTTGGAAGCAGGATTTTGA

Protein sequence

MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYNIQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGEFAPALLFHIRELTAALIEELSSSPPLVVDSTHLQNIPALLRQVLPAAADLLARPHLTAPLHPPWVFFVHFDGGDGGAVSICNHQSQRQEGNDAWDEEWVHVGNVERGNLLWGFEACESTVMVELRDQFWLKFHVWVRHANEWEIACVIRLELEAGF*

Homology

[Close]

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot
Match: P0CG85 (Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-68
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot
Match: P0CG84 (Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-68
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 225 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 284

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 285 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 344

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 345 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 377

[Close]

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot
Match: P69322 (Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-68
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 381

[Close]

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot
Match: P69325 (Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-68
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305

[Close]

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot
Match: Q8H159 (Polyubiquitin 10 OS=Arabidopsis thaliana OX=3702 GN=UBQ10 PE=2 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 2.0e-68
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]

BLAST of CsGy3G005435 vs. NCBI nr
Match: KAE8650142.1 (hypothetical protein Csa_011742 [Cucumis sativus])

HSP 1 Score: 585 bits (1509), Expect = 1.49e-210
Identity = 293/308 (95.13%), Postives = 293/308 (95.13%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN
Sbjct: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEFAPALLFHIRELTAALIEELSSSPPLVV 180
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG               ALIEELSSSPPLVV
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRG---------------ALIEELSSSPPLVV 180

Query: 181 DSTHLQNIPALLRQVLPAAADLLARPHLTAPLHPPWVFFVHFDGGDGGAVSICNHQSQRQ 240
           DSTHLQNIPALLRQVLPAAADLLARPHLTAPLHPPWVFFVHFDGGDGGAVSICNHQSQRQ
Sbjct: 181 DSTHLQNIPALLRQVLPAAADLLARPHLTAPLHPPWVFFVHFDGGDGGAVSICNHQSQRQ 240

Query: 241 EGNDAWDEEWVHVGNVERGNLLWGFEACESTVMVELRDQFWLKFHVWVRHANEWEIACVI 300
           EGNDAWDEEWVHVGNVERGNLLWGFEACESTVMVELRDQFWLKFHVWVRHANEWEIACVI
Sbjct: 241 EGNDAWDEEWVHVGNVERGNLLWGFEACESTVMVELRDQFWLKFHVWVRHANEWEIACVI 293

Query: 301 RLELEAGF 308
           RLELEAGF
Sbjct: 301 RLELEAGF 293

[Close]

BLAST of CsGy3G005435 vs. NCBI nr
Match: KAF7003046.1 (hypothetical protein CFC21_018429 [Triticum aestivum])

HSP 1 Score: 262 bits (670), Expect = 7.13e-85
Identity = 135/152 (88.82%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE 152
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE 152

[Close]

BLAST of CsGy3G005435 vs. NCBI nr
Match: NP_001190681.1 (ubiquitin 11 [Arabidopsis thaliana] >NP_001328999.1 polyubiquitin 10 [Arabidopsis thaliana] >XP_008345057.1 polyubiquitin [Malus domestica] >XP_009345196.1 PREDICTED: polyubiquitin [Pyrus x bretschneideri] >XP_009345209.1 PREDICTED: polyubiquitin [Pyrus x bretschneideri] >XP_009358112.1 PREDICTED: polyubiquitin [Pyrus x bretschneideri] >XP_009358113.1 PREDICTED: polyubiquitin [Pyrus x bretschneideri] >XP_019445679.1 PREDICTED: polyubiquitin isoform X2 [Lupinus angustifolius] >XP_022139938.1 polyubiquitin [Momordica charantia] >XP_022866028.1 polyubiquitin [Olea europaea var. sylvestris] >XP_030469650.1 polyubiquitin isoform X2 [Syzygium oleosum] >AAR83856.1 hexameric polyubiquitin 6PU11 [Capsicum annuum] >ACJ85770.1 unknown [Medicago truncatula] >AFK34391.1 unknown [Lotus japonicus] >AFW99819.1 ubiquitin [Gossypium hirsutum] >AHW29561.1 polyubiquitin [Picrorhiza kurrooa] >EPS65462.1 hypothetical protein M569_09314 [Genlisea aurea] >KAB2615721.1 ubiquitin 11 [Pyrus ussuriensis x Pyrus communis] >KAF5474736.1 hypothetical protein F2P56_006606 [Juglans regia] >KAG2306161.1 hypothetical protein Bca52824_025909 [Brassica carinata] >KAG2688202.1 hypothetical protein I3760_09G084500 [Carya illinoinensis] >PHT36415.1 Polyubiquitin [Capsicum baccatum] >PHU05491.1 Polyubiquitin 14 [Capsicum chinense] >CAN77120.1 hypothetical protein VITISV_031666 [Vitis vinifera] >CDY46367.1 BnaA09g19810D [Brassica napus])

HSP 1 Score: 262 bits (669), Expect = 7.21e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 153

[Close]

BLAST of CsGy3G005435 vs. NCBI nr
Match: WP_205680136.1 (ubiquitin family protein, partial [Acinetobacter baumannii])

HSP 1 Score: 262 bits (669), Expect = 7.45e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 2   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 61

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 121

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 122 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 154

[Close]

BLAST of CsGy3G005435 vs. NCBI nr
Match: KAE9613544.1 (Ubiquitin-40S ribosomal protein S27a [Lupinus albus])

HSP 1 Score: 262 bits (669), Expect = 7.45e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 2   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 61

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 62  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 121

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 122 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 154

[Close]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL
Match: A0A3B6B364 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 262 bits (670), Expect = 3.45e-85
Identity = 135/152 (88.82%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE 152
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGE 152

[Close]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL
Match: A0A0U1WT35 (Ubiquitin OS=Gossypium hirsutum OX=3635 GN=LOC107901929 PE=2 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.49e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 153

[Close]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL
Match: A0A2G2WFC3 (Polyubiquitin OS=Capsicum baccatum OX=33114 GN=CQW23_17970 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.49e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 153

[Close]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL
Match: A0A0C9QPL0 (TSA: Wollemia nobilis Ref_Wollemi_Transcript_14610_955 transcribed RNA sequence OS=Wollemia nobilis OX=56998 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.49e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 153

[Close]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL
Match: F4JGM3 (Polyubiquitin OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.49e-85
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 153
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 153

[Close]

BLAST of CsGy3G005435 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]

BLAST of CsGy3G005435 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

[Close]

BLAST of CsGy3G005435 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

[Close]

BLAST of CsGy3G005435 vs. TAIR 10
Match: AT4G05320.3 (polyubiquitin 10 )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 381

[Close]

BLAST of CsGy3G005435 vs. TAIR 10
Match: AT4G05320.4 (polyubiquitin 10 )

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MQIFVKTLHRKTLTLEVENSDTIENVKAKIQDIEGIPPYQQRLILAGRQLEDSKTIADYN 60
           MQIFVKTL  KT+TLEVE+SDTI+NVKAKIQD EGIPP QQRLI AG+QLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQTESDLRVLLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
           IQ ES L ++LRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGEF 154
           FAGKQLEDGRTLADYNIQKESTLHLVLRLRG F
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

The following BLAST results are available for this feature:

BLAST of CsGy3G005435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CG85	2.0e-68	88.24	Polyubiquitin OS=Nicotiana sylvestris OX=4096 GN=UBI11 PE=2 SV=1	[more]
P0CG84	2.0e-68	88.24	Polyubiquitin (Fragment) OS=Nicotiana sylvestris OX=4096 GN=UBI4 PE=2 SV=1	[more]
P69322	2.0e-68	88.24	Polyubiquitin OS=Pisum sativum OX=3888 GN=PU1 PE=2 SV=2	[more]
P69325	2.0e-68	88.24	Polyubiquitin OS=Glycine max OX=3847 GN=SUBI-1 PE=2 SV=2	[more]
Q8H159	2.0e-68	88.24	Polyubiquitin 10 OS=Arabidopsis thaliana OX=3702 GN=UBQ10 PE=2 SV=2	[more]

BLAST of CsGy3G005435 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650142.1	1.49e-210	95.13	hypothetical protein Csa_011742 [Cucumis sativus]	[more]
KAF7003046.1	7.13e-85	88.82	hypothetical protein CFC21_018429 [Triticum aestivum]	[more]
NP_001190681.1	7.21e-85	88.24	ubiquitin 11 [Arabidopsis thaliana] >NP_001328999.1 polyubiquitin 10 [Arabidopsi...	[more]
WP_205680136.1	7.45e-85	88.24	ubiquitin family protein, partial [Acinetobacter baumannii]	[more]
KAE9613544.1	7.45e-85	88.24	Ubiquitin-40S ribosomal protein S27a [Lupinus albus]	[more]

BLAST of CsGy3G005435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A3B6B364	3.45e-85	88.82	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1	[more]
A0A0U1WT35	3.49e-85	88.24	Ubiquitin OS=Gossypium hirsutum OX=3635 GN=LOC107901929 PE=2 SV=1	[more]
A0A2G2WFC3	3.49e-85	88.24	Polyubiquitin OS=Capsicum baccatum OX=33114 GN=CQW23_17970 PE=4 SV=1	[more]
A0A0C9QPL0	3.49e-85	88.24	TSA: Wollemia nobilis Ref_Wollemi_Transcript_14610_955 transcribed RNA sequence ...	[more]
F4JGM3	3.49e-85	88.24	Polyubiquitin OS=Arabidopsis thaliana OX=3702 GN=UBQ11 PE=2 SV=1	[more]

BLAST of CsGy3G005435 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05320.2	1.4e-69	88.24	polyubiquitin 10	[more]
AT4G02890.1	1.4e-69	88.24	Ubiquitin family protein	[more]
AT4G05050.1	1.4e-69	88.24	ubiquitin 11	[more]
AT4G05320.3	1.4e-69	88.24	polyubiquitin 10	[more]
AT4G05320.4	1.4e-69	88.24	polyubiquitin 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 87..107 score: 85.2 coord: 129..150 score: 91.18 coord: 108..128 score: 95.05
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 2.0E-25 score: 100.5 coord: 77..148 e-value: 3.0E-35 score: 133.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 1.1E-24 score: 85.9 coord: 79..150 e-value: 2.4E-33 score: 113.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 26.140577
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 77..152 score: 29.428661
None	No IPR available	GENE3D	3.10.20.90		coord: 1..77 e-value: 2.4E-35 score: 122.5 coord: 78..156 e-value: 8.9E-46 score: 156.1
None	No IPR available	PANTHER	PTHR10666:SF350	UBIQUITIN 13	coord: 1..151 coord: 75..153
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..151 coord: 75..153
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 77..151 e-value: 2.28016E-54 score: 169.932
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 103..128
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 76..152
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G005435.1	CsGy3G005435.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding