CsGy3G005270 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G005270
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein of unknown function (DUF3511)
LocationGy14Chr3: 4211435 .. 4211764 (-)
RNA-Seq ExpressionCsGy3G005270
SyntenyCsGy3G005270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

mRNA sequence

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCACCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAATTGAGTGTAAACAAGGTGTACCTAAACCAGTCACAGAGGCGAACTGTCGTCGACCCTTCGTTTGTGAAACAATATGTGACGAAGACATCGGAACCGTCGAAAAGTTGTATGAAGAAGCCATGGTGGAAGAAACCAGAAATGAGGAGACGACAACGCGTTGCTAAGTACAAATTGTATGGAGTTGAAGGGAAGGTAAAGAGATCAATAAAGAAAGGGATCAGGTGGATCAAAACCAAGTGTAGCAGAATTATGTCTGGGTTTTGA

Protein sequence

MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF*
Homology
BLAST of CsGy3G005270 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 219 bits (559), Expect = 4.80e-72
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRI+SGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of CsGy3G005270 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 2.93e-59
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRI+SGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of CsGy3G005270 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 142 bits (358), Expect = 2.19e-41
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPS--FVKQYVTKTSEPSKSC 60
           MEG+H  P KGGRSLE+IDVR LS NK+ L+QS+ R  VDPS    +Q + K SE SKS 
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           +K  WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KT+CSRIMSGF
Sbjct: 61  VKS-WWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of CsGy3G005270 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135 bits (340), Expect = 1.21e-38
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0

Query: 1   MEGLHHHPNKGG-RSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCM 60
           MEG+H  P+KGG RSLEVIDVRKLS N+V+L+QS+R   +DPS VK  V KT E S+   
Sbjct: 1   MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSRRPAAMDPSAVKPRVVKTGEGSRGGS 60

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
              WWK PEM+R++RVAKYKLY VEG+VK SIKKG+RW K++CSRI+ GF
Sbjct: 61  GNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF 110

BLAST of CsGy3G005270 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 1.49e-37
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RI+SGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of CsGy3G005270 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 2.32e-72
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRI+SGF
Sbjct: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

BLAST of CsGy3G005270 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 1.42e-59
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKTSEPSKSCMK 60
           MEGLHHH NKGGRSLEV+DVRKLS NK+YLNQSQRRTVVDPSFVK+YVTKT EPSK  MK
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKTWEPSK--MK 60

Query: 61  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           K WWKKPEM+RRQRVAKYKLY VEGKVK SIKKG RWIKTKCSRI+SGF
Sbjct: 61  KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

BLAST of CsGy3G005270 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 142 bits (358), Expect = 1.06e-41
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPS--FVKQYVTKTSEPSKSC 60
           MEG+H  P KGGRSLE+IDVR LS NK+ L+QS+ R  VDPS    +Q + K SE SKS 
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  MKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
           +K  WWK PEM+RR+RVAKYKLY VEGKVK SIKKGI+W KT+CSRIMSGF
Sbjct: 61  VKS-WWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

BLAST of CsGy3G005270 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 7.22e-38
Identity = 67/110 (60.91%), Postives = 85/110 (77.27%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RI+SGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

BLAST of CsGy3G005270 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 8.13e-35
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0

Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60
           MEG+H  PNKG R+L +IDVRKLS NK++LNQS R++ ++PS VK    KT SE SK+  
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 109
            K W KK E++RR+RVAKYKLY VEGKVK SI+KGI W K K +RIMSGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

BLAST of CsGy3G005270 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 10  KGGRSLEVIDVRKLS-VNKVYL------NQSQRRTVV--DPSFVKQYVTKTSEPSKSCMK 69
           +G R+L++++   L  V  +Y+      N+S  +T +    S+    V      S S + 
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 70  KPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSG 109
           K WW  PE++R++RVAKYKLY  EGK+K +++K  +WIK +CS+I+ G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of CsGy3G005270 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           EM+R++R+A+YK Y VEGKVK ++K G RWIK KC +I+  F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of CsGy3G005270 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 56  KSCMKKPWW--KKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSGF 110
           KS  +   W    PE++R++RVA YK+YGVEGKVK S +   RW+K + ++++ G+
Sbjct: 49  KSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

BLAST of CsGy3G005270 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 68  EMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMSG 109
           E +R++R+A YK Y +EGKVK ++KKG  WIK + S I+ G
Sbjct: 70  ETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of CsGy3G005270 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 18/41 (43.90%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 67  PEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIMS 108
           P+++R++RV  Y+ Y VEGK+K S +K  +WIK KC+++++
Sbjct: 76  PDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN56136.14.80e-7299.08hypothetical protein Csa_009524 [Cucumis sativus][more]
KAA0033960.12.93e-5987.16DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro... [more]
XP_022151002.12.19e-4167.57uncharacterized protein LOC111019023 [Momordica charantia][more]
KAG7017168.11.21e-3863.64hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0032381.11.49e-3760.91hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ963... [more]
Match NameE-valueIdentityDescription
A0A0A0L7N52.32e-7299.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1[more]
A0A5D3BTT81.42e-5987.16DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9... [more]
A0A6J1DCB31.06e-4167.57uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3BBI77.22e-3860.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LL308.13e-3562.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05725.11.4e-1136.11Protein of unknown function (DUF3511) [more]
AT2G47480.11.4e-0857.14Protein of unknown function (DUF3511) [more]
AT5G11970.17.9e-0742.86Protein of unknown function (DUF3511) [more]
AT3G62640.12.3e-0651.22Protein of unknown function (DUF3511) [more]
AT2G19460.13.0e-0643.90Protein of unknown function (DUF3511) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 64..108
e-value: 1.0E-21
score: 76.5
NoneNo IPR availablePANTHERPTHR33193DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 9..108
NoneNo IPR availablePANTHERPTHR33193:SF13DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATEDcoord: 9..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G005270.2CsGy3G005270.2mRNA