CsGy3G004910 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G004910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	TF-B3 domain-containing protein
Location	Gy14Chr3: 3941464 .. 3942141 (+)
RNA-Seq Expression	CsGy3G004910
Synteny	CsGy3G004910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAATAGTCAATGAACATGCTCCTGTAGTCAATGAAGTTCTACCCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTAGTCGGTAGAGATCAGGGTAGATTTCCTCCGATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGCCCACCATTTGTGAAGCAATTGACAAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTTCAATGATGATGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTTAA

mRNA sequence

ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAATAGTCAATGAACATGCTCCTGTAGTCAATGAAGTTCTACCCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTAGTCGGTAGAGATCAGGGTAGATTTCCTCCGATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGCCCACCATTTGTGAAGCAATTGACAAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTTCAATGATGATGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTTAA

Coding sequence (CDS)

ATGGTTGATGTACATTACACCTACAACAACAAAATAGTTGCAGAGGATGTCTACAAAGCATCTTTGATTCTTTATGACATGGCGTTAAGTAAAAGTGTGGAACCATTTGAAGAGCCGATAGATCGTTTCAACAATCAACTTTCAAGTACTTCCACTTCTCTAGTCAATGAACAATCTCCAATAGTCAATGAACATGCTCCTGTAGTCAATGAAGTTCTACCCAACAATGATGACGATAATGGCAATAATGAAAATGTGGCAGCGGCGGTCGTAGTCGGTAGAGATCAGGGTAGATTTCCTCCGATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGCCCACCATTTGTGAAGCAATTGACAAAAACAGACGTGACTGACAATCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGAATCTTAATTTAGATCCCATGTTCAATGATGATGAGGATCTGGAGGATGGAATTAGTGTTATTGTTTATGATATTGAAGGAAGAGAATACGACATGATATTCAAGCTTTGGGCTTCCAAACTTTACGTGCTAACAAAAAGTTGGAAGGAGTTTTACAAGACCAATGATTTGACGCAACCGGGTGAATTTATTAGTGTTTGGATGTTTCGACATGTCGTCACTCAGAAGCTTTGCTTTGCTATTATGAGAGGACAAGCTTAA

Protein sequence

MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA*

Homology

[Close]

BLAST of CsGy3G004910 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 113 SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMI 172
           S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 173 FKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI 221
           FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+ T+KLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CsGy3G004910 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-15
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 118 KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWA 177
           +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 178 SKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI 221
               VLT  WK F K+  L +  +F+++WMFRH  T+++CFAI
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CsGy3G004910 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 113 SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMI 172
           S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 173 FKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS 205
           FK+W   K  VLT  W +F     L +  +F++
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of CsGy3G004910 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 452 bits (1162), Expect = 3.39e-160
Identity = 224/225 (99.56%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60
           MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60

Query: 61  IVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120
           +VNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL
Sbjct: 61  VVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120

Query: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180
           TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL
Sbjct: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180

Query: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225
           YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA
Sbjct: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CsGy3G004910 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 311 bits (797), Expect = 1.29e-104
Identity = 161/226 (71.24%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSS-TSTSLVNEQS 60
           MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q 
Sbjct: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60

Query: 61  PIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQ 120
           PI+ E AP+VNE LPNN     NNENVA AV  GRD GR PPMAVIQNIIGECSPPFVKQ
Sbjct: 61  PILIERAPIVNEALPNN-----NNENVAVAVA-GRDWGRVPPMAVIQNIIGECSPPFVKQ 120

Query: 121 LTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASK 180
           L KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SK
Sbjct: 121 LMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSK 180

Query: 181 LYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225
           LYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIMRG A
Sbjct: 181 LYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDA 220

[Close]

BLAST of CsGy3G004910 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (764), Expect = 1.50e-99
Identity = 165/230 (71.74%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV----- 60
           MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+V     
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEM--KKSSEPFEEP----NQFPSSTSISMVDDQPP 60

Query: 61  --NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECS 120
             NEQ PIVNEHAPVVNE L NN+  N NNENVAA VV  RD GR PPMAVIQNIIGECS
Sbjct: 61  VVNEQPPIVNEHAPVVNEALLNNN--NNNNENVAA-VVADRDLGRLPPMAVIQNIIGECS 120

Query: 121 PPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIF 180
           PPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F
Sbjct: 121 PPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTF 180

Query: 181 KLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRG 223
           +LW SKLYVLTKSWK+FY  N LT+P EFI++WMFRHVV  KLCFAIMRG
Sbjct: 181 RLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRG 221

[Close]

BLAST of CsGy3G004910 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194 bits (492), Expect = 1.83e-58
Identity = 113/229 (49.34%), Postives = 148/229 (64.63%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLS-STSTSLVNE-Q 60
           MV VHY +NN+I+ +DVY+ + I + +      E F EP    + Q+S STS  + +E +
Sbjct: 1   MVRVHYRHNNRIIEKDVYETARIFHCLCTG---EQFPEPSYSSDEQVSGSTSGDMDDENE 60

Query: 61  SPIVNEHAPVVNEVLPNNDDDNGNNENVA---AAVVVGRDQGRFPPMAVIQNIIGECSPP 120
           +P +N    V  EV           E VA   A VV+       P +AVI NIIG  SPP
Sbjct: 61  APSINGDEDVALEV-----------EEVAEVVAPVVI-------PALAVIMNIIGARSPP 120

Query: 121 FVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKL 180
           + K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V VY+ EGR+YDM FKL
Sbjct: 121 WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKL 180

Query: 181 WASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQ 224
           WASKLYVLTK W +FYKTN+LT PG ++++WMFRHV T K+CFA+  GQ
Sbjct: 181 WASKLYVLTKGWNDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAGQ 208

[Close]

BLAST of CsGy3G004910 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173 bits (439), Expect = 3.85e-51
Identity = 80/126 (63.49%), Postives = 100/126 (79.37%), Query Frame = 0


Query: 99  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGIS 158
            P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI 
Sbjct: 32  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGID 91

Query: 159 VIVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCF 218
           V VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+PG ++++WMFRHV T K+CF
Sbjct: 92  VTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICF 151

Query: 219 AIMRGQ 224
           A+  GQ
Sbjct: 152 AVTAGQ 157

[Close]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 1.64e-160
Identity = 224/225 (99.56%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60
           MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLVNEQSP 60

Query: 61  IVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120
           +VNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL
Sbjct: 61  VVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQL 120

Query: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180
           TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL
Sbjct: 121 TKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASKL 180

Query: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225
           YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA
Sbjct: 181 YVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 298 bits (764), Expect = 7.25e-100
Identity = 165/230 (71.74%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSSTSTSLV----- 60
           MV V Y YNNKIV ++VY+A L L +M   KS EPFEEP    N   SSTS S+V     
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEM--KKSSEPFEEP----NQFPSSTSISMVDDQPP 60

Query: 61  --NEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECS 120
             NEQ PIVNEHAPVVNE L NN+  N NNENVAA VV  RD GR PPMAVIQNIIGECS
Sbjct: 61  VVNEQPPIVNEHAPVVNEALLNNN--NNNNENVAA-VVADRDLGRLPPMAVIQNIIGECS 120

Query: 121 PPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIF 180
           PPFVKQLTKTDVTD+QGRLALHKEFVN NL PMFN DE L +GISV VYD EGREYDM F
Sbjct: 121 PPFVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTF 180

Query: 181 KLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRG 223
           +LW SKLYVLTKSWK+FY  N LT+P EFI++WMFRHVV  KLCFAIMRG
Sbjct: 181 RLWTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRG 221

[Close]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 4.21e-67
Identity = 101/124 (81.45%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 102 MAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIV 161
           MAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV V
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 162 YDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIM 221
           YD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIM
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 222 RGQA 225
           RG A
Sbjct: 121 RGDA 124

[Close]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 148 bits (374), Expect = 1.37e-40
Identity = 94/241 (39.00%), Postives = 136/241 (56.43%), Query Frame = 0


Query: 9   NNKIVAEDVYKASLILYDMALS------------------KSVEPFEEPIDR---FNNQL 68
           N K    +VY+A++ LY M+ S                  + V  F++P  +    N+ +
Sbjct: 6   NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNV 65

Query: 69  SSTSTSLVNEQSPIVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQN 128
            + +   V+E+    +     VN+  P  D  N NN+        G ++   PP+  I++
Sbjct: 66  HNNNNVNVDEERQPSSSRNKQVNQEAPP-DPPNNNND--------GEERRGMPPVPAIRD 125

Query: 129 IIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFN---DDEDLEDGISVIVYDI 188
           +IG+CS  + K+LT +DV + QGRLA+ KEFV   L PMFN   ++E+L +GI V VY+ 
Sbjct: 126 VIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNR 185

Query: 189 EGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQP--GEFISVWMFRHVVTQKLCFAIMR 223
           EGRE+ M FK+WASKLYVL K WK F K N+LT    GEF+++WMFRH  T  LCFAI+ 
Sbjct: 186 EGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIIL 237

[Close]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL
Match: A0A6P5WRG4 (uncharacterized protein LOC111276629 isoform X3 OS=Durio zibethinus OX=66656 GN=LOC111276629 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 4.48e-35
Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 99  FPPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGIS 158
            PP+A +  +IG+CS PF K+LT+TD+TD Q RL+L+K+ V   + P+  +DED+ +GI 
Sbjct: 103 IPPVAALTGLIGKCSRPFEKRLTETDLTDRQTRLSLNKKHVQEFMIPLLKEDEDVNEGIR 162

Query: 159 VIVYDIEGREYDMIFKLWASKLYVLTK-SWKEFYKTNDLTQPGEFISVWMFRHVVTQKLC 218
           VI YDIEG+EY+M F  W+ K+YVLT   WK FY+ + L +  + ++VWMFRH +TQ +C
Sbjct: 163 VITYDIEGKEYEMKFVFWSLKMYVLTSPGWKTFYREHRLEKDIDIVTVWMFRHRLTQNIC 222

Query: 219 FAI 220
           F I
Sbjct: 223 FVI 225

[Close]

BLAST of CsGy3G004910 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 113 SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMI 172
           S P  KQL  +DV  +Q  L L KE V   + P   D E+   GI V VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 173 FKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI 221
           FK+W   K  VLT  WK+F +   L+   +F++VWMFRH+ T+KLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CsGy3G004910 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 118 KQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWA 177
           +QL  +DV DNQ RL L KE V   +D +   ++    G++V VY   G  + M+ K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 178 SKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAI 221
               VLT  WK F K+  L +  +F+++WMFRH  T+++CFAI
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CsGy3G004910 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 113 SPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMI 172
           S P  KQL  +DV  +Q RL L KE V   + P   + ED   G+ V VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 173 FKLW-ASKLYVLTKSWKEFYKTNDLTQPGEFIS 205
           FK+W   K  VLT  W +F     L +  +F++
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

The following BLAST results are available for this feature:

BLAST of CsGy3G004910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	2.0e-17	44.04	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	3.2e-15	39.81	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	2.2e-08	36.56	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]

BLAST of CsGy3G004910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56101.1	3.39e-160	99.56	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
XP_031736688.1	1.29e-104	71.24	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KAA0043114.1	1.50e-99	71.74	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]
KAG6589940.1	1.83e-58	49.34	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7023605.1	3.85e-51	63.49	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of CsGy3G004910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L0	1.64e-160	99.56	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A5D3BAS8	7.25e-100	71.74	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LC65	4.21e-67	81.45	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A6J1CTE7	1.37e-40	39.00	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A6P5WRG4	4.48e-35	49.59	uncharacterized protein LOC111276629 isoform X3 OS=Durio zibethinus OX=66656 GN=...	[more]

BLAST of CsGy3G004910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	1.4e-18	44.04	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	2.3e-16	39.81	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	1.6e-09	36.56	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 116..224 e-value: 1.6E-6 score: 37.6
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 116..221 e-value: 2.3E-7 score: 30.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 117..224 score: 9.03689
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 114..209 e-value: 2.1717E-15 score: 67.3529
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 108..225 e-value: 3.9E-19 score: 70.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 114..211
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 5..221
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 5..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G004910.1	CsGy3G004910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding