CsGy3G004420 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G004420
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Zinc finger CCCH domain-containing protein 18-like
Location	Gy14Chr3: 3568431 .. 3571444 (+)
RNA-Seq Expression	CsGy3G004420
Synteny	CsGy3G004420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAACAAAGAAAAATGGTTCCTTTTGCCCATAATGCCTGGTCTGAAGCTTTCTTTCTCTGCTCTTACTTTCTTTATTCTTTTTGTTCATATAAATTTCCCAGATTTAGTACTTCTTTTTTTAGCATTGTTTTGGGGTTCAATTCGATTATTGTAAAGTTTTTTCAAATGGGGTTTTTAAAAGTTTGTTTCTTTGTTTGAATTCAAAGTTCCCTGCTCTTAATTTCTTTTGAAGTTCTTTTTTAGTTTTTAATTGAAAGCTTCCAGAAAAACTTAGGGAAACCATCGAAGAAGATTGGTTTTTCTCATTTTTTTTATTCAATTTGTTAGTCTTCTATTTCATTCCTTCCGAATTTTTACTTCCTTTTGTATTGTTTTTGTAACTCCATTTCCTCAATTTCTATATGTATATATATATTTATATTTATGGTTTCATTCTATCAATTTGTATAGATATTGAAATTTTCATTAATATGTTTGAATGTAGTGTATGAAAAGTTTATGGAGTTTTCGGCTCACACTAGGACTGTATTCCATCGAATCAATCAAATCGATCCCGACAATGTCATGAAAATCATTGGATTCTTACTTCTCCATGATAATGGGGATCAGGAGATGGCGAGGCTAGCACTAGCAAATGAGAGCCATATTGAAAAAGTTGTTATGCTAGCCAAGACTGAGCTGCATCAACTGCGATCGATGCCAGTCCCGGTATCACCATTAGCCATTAGAAACAGGCAGCCTTCAACTTCCCCTCCTGGTTGGGAGCAACAACAGCTTACTAACAAGCATACTCCTGATTACATATCATTAGGCTATCATGATTCTTCTATGTATGACTTACAAAATGCAGCTAACTTATTTTGCTTAGAGGACCATATGGAACAGTCGAACTCGGGTCTCTCTAGCTTTGATTGTAGCTATGCTGATAATATGCTCAATAGCTTTAGTACTAGGAACACCCGCCATTACTCGAATGTGCCAGATTTTCAGCCTAGGACATGTCACTACTACAACAAAGGATTTTGCAAGCATGGAAATAGCTGTAGGTATCTCCATAGCAACCTCGTGCCTGGGAGCCTTTCTCATCTGTATAATACCAATTCTAATGTCAATGATGATCATGTTTTCCGACCTGGTTCACTTGAGAGGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCAGTCCTATTTCAATTGCTTCATTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGTTACCTAACTGAGAGCCAAAGGCATGGTAAGTCAGGTTTTAGCTTGACGAAGCTCCTCACTCGATTGAAAAACAGCATCCAAGTGATCGACAGGTTGGTTTAGGTTACAGTTTCAGTTCCGGTTTCGATTATGACTTTAAAGCTGGCTGTTAATACTTATTTTTGGTTTGTTTGACATATCAGGCCTCATGGACAGCATGCAGTCATTTTGGCAGAAGATGCTCCGAAATTCATGGACCATAGGAAGGATAGGAATGATCCCGGGCCGATTGTTAGCAGTGCCCGACAGATATATATGACATTTCCAGCTGACAGTACCTTCACAGAAGATGATGTTTCTGATTACTTCAGGCAAATGCTAATTGATTGTATTTGTTTCTTATTAATGTTTCAATTGCACATATCTTATTTTGATTGTGTGTGATCGTAGTGTCCACTATGGAATGGTTGAAGATGTAAGGATACCCTGCCAACAAAGAAGGATGTTCGGGTTTGTCACATTTCACAGTATGGAGACTGTGAAACTAATCTTGTCTGATGATAGTGAGCATTTGATTTGCGGGGCTCGGGTTCTCGTGAAACCTTATAGAGAAAAGTCCAAGCTGTTGGAAAGGTGTCACCTTATTTCCATTCCTCTGCCTATTTCTTCTCCCCTATTCCTTCTCCGTTGCCTTCAACTTCTTAAAATTTGATGTAGGAAATACCAAGAAAGAATTGAACAACAACACCAAGATTACTTTGCTTCACACTACAACAGCCTTGAATCCGAGCAGCTTCACTCAAGTAAGTGGAGGATCGAGATTTACTTGTCTATTGTCTAAGTTTATTCATCACATCCATTTATTACTCACAAATCATATAGTTGGTAGAGGCTATGATTTCCCCCCCACAATGCTGAGACTAAGGATGGAAGAGCAGCAGCAACAACAGCGTGAACTCGAGAGGAGCCTTTCTGAGATGACCTTAGTTCAGAAATCGGTCGTGAATCAGCCCTACTTTAGCTATCAGATGAACGAACTGAAAGTTCCAGTCCCAGAAGGTTGATGATGATGATGCATTTTCTTATAAAAAGATCATATCCTTATGTACCATAGGAATAATCAAATAAAGAATTTTCAAATCAAATAAATAATTTCCTACAGTCTATTGGAACAAAAAAGAAAAAAAAGAAAAAGGTACTTATTTTATTTTATATATATTCAAATAAGTTAATTCAAATTTGACTTTATTATAATTCATTTTTAGCAGCTACAGAAAGTTTTGAGCATTTGATGGATATTCTCAACGTTCTAAATAGTGGCTCTAACTCTAGCTCGAGCTCTACTGATGATAATAAGCAGCAACCCCACCCCCAAAACGTGACAGATTGGAATCACATGGAACTCAACCTCGAGAGGTAGAAACAAGAACATATATATTTTATGTGTTTGTGATGGTGAAATGGTTAATGAATTTGGGGATTTTCTTTTGTTTATGATGGCAGTGAAGGATATAACTTACCAGAAAGTCCGTTTTAAACTGGAACAGATAGAAAGTGATAGAGATACAGGCATACAACATATAGAAGGCTTACCAATTTGATGTCCCAGAGTATATAGAGTTTTAAACTCGTCATCCATCCAGCTTATAATAAAATATAATGCACAGATCTTACAATGTAAGGAGATTATAAAGGTTTCTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGGAGGAGGAGGAGGAGAAGGAGA

mRNA sequence

AACAACAAAGAAAAATGGTTCCTTTTGCCCATAATGCCTGTGTATGAAAAGTTTATGGAGTTTTCGGCTCACACTAGGACTGTATTCCATCGAATCAATCAAATCGATCCCGACAATGTCATGAAAATCATTGGATTCTTACTTCTCCATGATAATGGGGATCAGGAGATGGCGAGGCTAGCACTAGCAAATGAGAGCCATATTGAAAAAGTTGTTATGCTAGCCAAGACTGAGCTGCATCAACTGCGATCGATGCCAGTCCCGGTATCACCATTAGCCATTAGAAACAGGCAGCCTTCAACTTCCCCTCCTGGTTGGGAGCAACAACAGCTTACTAACAAGCATACTCCTGATTACATATCATTAGGCTATCATGATTCTTCTATGTATGACTTACAAAATGCAGCTAACTTATTTTGCTTAGAGGACCATATGGAACAGTCGAACTCGGGTCTCTCTAGCTTTGATTGTAGCTATGCTGATAATATGCTCAATAGCTTTAGTACTAGGAACACCCGCCATTACTCGAATGTGCCAGATTTTCAGCCTAGGACATGTCACTACTACAACAAAGGATTTTGCAAGCATGGAAATAGCTGTAGGTATCTCCATAGCAACCTCGTGCCTGGGAGCCTTTCTCATCTGTATAATACCAATTCTAATGTCAATGATGATCATGTTTTCCGACCTGGTTCACTTGAGAGGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCAGTCCTATTTCAATTGCTTCATTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGTTACCTAACTGAGAGCCAAAGGCATGGTAAGTCAGGTTTTAGCTTGACGAAGCTCCTCACTCGATTGAAAAACAGCATCCAAGTGATCGACAGGCCTCATGGACAGCATGCAGTCATTTTGGCAGAAGATGCTCCGAAATTCATGGACCATAGGAAGGATAGGAATGATCCCGGGCCGATTGTTAGCAGTGCCCGACAGATATATATGACATTTCCAGCTGACAGTACCTTCACAGAAGATGATGTTTCTGATTACTTCAGTGTCCACTATGGAATGGTTGAAGATGTAAGGATACCCTGCCAACAAAGAAGGATGTTCGGGTTTGTCACATTTCACAGTATGGAGACTGTGAAACTAATCTTGTCTGATGATAGTGAGCATTTGATTTGCGGGGCTCGGGTTCTCGTGAAACCTTATAGAGAAAAGTCCAAGCTGTTGGAAAGGAAATACCAAGAAAGAATTGAACAACAACACCAAGATTACTTTGCTTCACACTACAACAGCCTTGAATCCGAGCAGCTTCACTCAATTGGTAGAGGCTATGATTTCCCCCCCACAATGCTGAGACTAAGGATGGAAGAGCAGCAGCAACAACAGCGTGAACTCGAGAGGAGCCTTTCTGAGATGACCTTAGTTCAGAAATCGGTCGTGAATCAGCCCTACTTTAGCTATCAGATGAACGAACTGAAAGTTCCAGTCCCAGAAGCTACAGAAAGTTTTGAGCATTTGATGGATATTCTCAACGTTCTAAATAGTGGCTCTAACTCTAGCTCGAGCTCTACTGATGATAATAAGCAGCAACCCCACCCCCAAAACGTGACAGATTGGAATCACATGGAACTCAACCTCGAGAGTGAAGGATATAACTTACCAGAAAGTCCGTTTTAAACTGGAACAGATAGAAAGTGATAGAGATACAGGCATACAACATATAGAAGGCTTACCAATTTGATGTCCCAGAGTATATAGAGTTTTAAACTCGTCATCCATCCAGCTTATAATAAAATATAATGCACAGATCTTACAATGTAAGGAGATTATAAAGGTTTCTTTGTTTGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGGAGGAGGAGGAGGAGAAGGAGA

Coding sequence (CDS)

ATGCCTGTGTATGAAAAGTTTATGGAGTTTTCGGCTCACACTAGGACTGTATTCCATCGAATCAATCAAATCGATCCCGACAATGTCATGAAAATCATTGGATTCTTACTTCTCCATGATAATGGGGATCAGGAGATGGCGAGGCTAGCACTAGCAAATGAGAGCCATATTGAAAAAGTTGTTATGCTAGCCAAGACTGAGCTGCATCAACTGCGATCGATGCCAGTCCCGGTATCACCATTAGCCATTAGAAACAGGCAGCCTTCAACTTCCCCTCCTGGTTGGGAGCAACAACAGCTTACTAACAAGCATACTCCTGATTACATATCATTAGGCTATCATGATTCTTCTATGTATGACTTACAAAATGCAGCTAACTTATTTTGCTTAGAGGACCATATGGAACAGTCGAACTCGGGTCTCTCTAGCTTTGATTGTAGCTATGCTGATAATATGCTCAATAGCTTTAGTACTAGGAACACCCGCCATTACTCGAATGTGCCAGATTTTCAGCCTAGGACATGTCACTACTACAACAAAGGATTTTGCAAGCATGGAAATAGCTGTAGGTATCTCCATAGCAACCTCGTGCCTGGGAGCCTTTCTCATCTGTATAATACCAATTCTAATGTCAATGATGATCATGTTTTCCGACCTGGTTCACTTGAGAGGTTGGAGTTTGAAATTGTTGAGCTTCTTAAATCAAGAAGAGGCAGTCCTATTTCAATTGCTTCATTGCCAATGATTTACTATGAAAAGTATGGAAAAGTTCTTCAAGCTGAAGGTTACCTAACTGAGAGCCAAAGGCATGGTAAGTCAGGTTTTAGCTTGACGAAGCTCCTCACTCGATTGAAAAACAGCATCCAAGTGATCGACAGGCCTCATGGACAGCATGCAGTCATTTTGGCAGAAGATGCTCCGAAATTCATGGACCATAGGAAGGATAGGAATGATCCCGGGCCGATTGTTAGCAGTGCCCGACAGATATATATGACATTTCCAGCTGACAGTACCTTCACAGAAGATGATGTTTCTGATTACTTCAGTGTCCACTATGGAATGGTTGAAGATGTAAGGATACCCTGCCAACAAAGAAGGATGTTCGGGTTTGTCACATTTCACAGTATGGAGACTGTGAAACTAATCTTGTCTGATGATAGTGAGCATTTGATTTGCGGGGCTCGGGTTCTCGTGAAACCTTATAGAGAAAAGTCCAAGCTGTTGGAAAGGAAATACCAAGAAAGAATTGAACAACAACACCAAGATTACTTTGCTTCACACTACAACAGCCTTGAATCCGAGCAGCTTCACTCAATTGGTAGAGGCTATGATTTCCCCCCCACAATGCTGAGACTAAGGATGGAAGAGCAGCAGCAACAACAGCGTGAACTCGAGAGGAGCCTTTCTGAGATGACCTTAGTTCAGAAATCGGTCGTGAATCAGCCCTACTTTAGCTATCAGATGAACGAACTGAAAGTTCCAGTCCCAGAAGCTACAGAAAGTTTTGAGCATTTGATGGATATTCTCAACGTTCTAAATAGTGGCTCTAACTCTAGCTCGAGCTCTACTGATGATAATAAGCAGCAACCCCACCCCCAAAACGTGACAGATTGGAATCACATGGAACTCAACCTCGAGAGTGAAGGATATAACTTACCAGAAAGTCCGTTTTAA

Protein sequence

MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNHMELNLESEGYNLPESPF*

Homology

[Close]

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot
Match: Q9SJ41 (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=At2g05160 PE=2 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.8e-104
Identity = 241/575 (41.91%), Postives = 336/575 (58.43%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLL-HDNGDQEMARLALANESHIEKVVMLAKT 67
           M F+     V  RI Q++P+N  KI G+LLL  +NG+++M RLA   +S +  V+   K 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 68  EL----HQLRSMP---VPV---------SPLAIRNRQPSTSPPGWEQQQLTNKHTPDYIS 127
           EL    H   S P   +P          SPL++     S SPP               + 
Sbjct: 61  ELARNSHHYHSPPSDHIPTPKFGSFTGSSPLSV-----SVSPP---------------MK 120

Query: 128 LGYHDSS--MYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVP 187
            G+ ++S  M  LQN       ED +         F   +          R +R   ++P
Sbjct: 121 TGFWENSTEMDTLQNNLQFLNFEDPLTS-----PEFSNGFFSQERQCLPLRTSRRSPSLP 180

Query: 188 DFQPRTCHYYNKGFCKHGNSCRYLHSNLVP--GSLSHLYNTNSNVND-DHVFRPGSLERL 247
           +F  + CHY+NKGFCKHGN+CRY H  ++P   S + ++N N+N++D +HV  P SLE+L
Sbjct: 181 EFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKL 240

Query: 248 EFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK 307
           E EI+ELLK RRG+PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTKLL RLK
Sbjct: 241 EGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLK 300

Query: 308 NSIQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVS 367
           N+I+++DRPHGQH+VILAEDA KF+++  +RN+ G I++ +RQIY+TFPA+S+FTE DVS
Sbjct: 301 NTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVS 360

Query: 368 DYFSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 427
            YF+  YG VEDVRIPCQQ+RM+GFVTF S ETVK IL+  + H IC ARVLVKPYREKS
Sbjct: 361 IYFT-SYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKS 420

Query: 428 KLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELE 487
           +    +Y +  +  H   + S +   + E           PP +       +  + R+  
Sbjct: 421 R--SSRYLDNYKPLHGMRYGSKFIERDIEM-------NTLPPRV------SESSRMRKPF 480

Query: 488 RSLSEMTLVQKSVVNQPYFSYQMNELKVPV-PEATESFEHLMDILNVLNSGSNSSSSSTD 547
            S  E ++ +    N  Y  +  ++ K+    E  E  E L  +L+ LN+  N  + +T+
Sbjct: 481 LSEPEQSVSKSLPTNYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDYLNTEDNVMNITTN 524

Query: 548 --DNKQQPHPQNVTDWNHMELNLESEGYNLPESPF 558
             DN ++ H +          +L+S+  NLPESPF
Sbjct: 541 YRDNDRRTHCE----------SLDSQVLNLPESPF 524

[Close]

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot
Match: Q6ZK57 (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0126700 PE=2 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 7.5e-74
Identity = 176/392 (44.90%), Postives = 239/392 (60.97%), Query Frame = 0


Query: 173 RTCHYYNKGFCKHGNSCRYLHSNLVPGSLS-HLYNTNSNVNDDHVFRPGSLERLEFEIVE 232
           R CHY++KG CK+G +C Y H  +   +L+    N +   +      PGSLE LE EI E
Sbjct: 264 RPCHYFSKGICKNGQNCHYSHHQVYQDALAGAAINGDVYNHQPGGVTPGSLETLEMEITE 323

Query: 233 LLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVI 292
           LL SRRG P+SIASLP +Y EKYGK LQA+GYLTESQRHGK+G+SLT+LL+RL N I+VI
Sbjct: 324 LLNSRRGQPVSIASLPTLYGEKYGKGLQADGYLTESQRHGKAGYSLTRLLSRL-NKIRVI 383

Query: 293 DRPHGQHAVILAEDAPKFMDHR----KDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDY 352
           +RPHGQH+V+LAEDA K+MD R        D G + +S+ QIY+TFPA+STF EDDV++Y
Sbjct: 384 ERPHGQHSVVLAEDAAKYMDFRGGGGGGGGDTGSVPASSHQIYLTFPAESTFAEDDVANY 443

Query: 353 FSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKL 412
           F   YG V DVRIPCQ+RRMFGFV+F S ETV  IL   + H ICG+RVLVKPYREKSK 
Sbjct: 444 FG-QYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKC 503

Query: 413 LERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERS 472
           ++R   + I+     Y    +   + E   +    YD    ++R ++ E+++   E+ER 
Sbjct: 504 VDRTCVDNIKSM-VPYCPPRFFEFDQELYTA---EYD-ASRLMRKQLAEKREMLLEMERR 563

Query: 473 LSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNK 532
            + +  ++       YF   + +   P+    +  + L D++N   S ++        N 
Sbjct: 564 RATVRRLESMPPQFAYFDCSIEDAS-PLHSLQDDSKQL-DLMN--PSLASPDPLEIVSNS 623

Query: 533 QQPHPQ--NVTDWNHMELNLESEGYNLPESPF 558
           Q P  Q  N+ D +H    +E     LPESPF
Sbjct: 624 QAPPTQAGNIYD-DHESNQIEL----LPESPF 639

[Close]

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot
Match: Q84ZT0 (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0583300 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.2e-48
Identity = 115/242 (47.52%), Postives = 157/242 (64.88%), Query Frame = 0


Query: 173 RTCHY-YNKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVE 232
           + CH+ + +G+CK G +C++ H     GS+  L+N        H F   SL +L+ EI E
Sbjct: 180 KPCHFHFFRGYCKKGVNCQFFH-----GSVPELHNP----RQVHPF--ASLSKLDMEIRE 239

Query: 233 LLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVI 292
           LL      P+++  LP +Y+EKYGK L+ +G+LTESQ+HG++G SLT LL  L N+I+V+
Sbjct: 240 LLIG-IPPPVAVDRLPSMYFEKYGKPLRPDGWLTESQQHGRTGCSLTSLLMGL-NTIRVV 299

Query: 293 DRPHGQHAVILAEDA-PKFMD-----HRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVS 352
           +R HGQ+ V+L EDA  K+MD     H  +  D G   + + QIYMTFP  S FT+DDV 
Sbjct: 300 EREHGQYHVVLVEDARKKYMDCLGLAHSCNLMDTG---TGSNQIYMTFPVHSKFTDDDVE 359

Query: 353 DYFSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 408
           +YF   +G V  VRIP Q++RMFGFV+F   ETV+LILS  + H ICG RVLVK Y EKS
Sbjct: 360 NYFK-QFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKS 404

[Close]

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot
Match: Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.1e-40
Identity = 166/535 (31.03%), Postives = 236/535 (44.11%), Query Frame = 0


Query: 14  TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQL-- 73
           T+ VF RI  +DPD+  KI+G LL+ D+GD+EM RLA   E+ +  V+  A+ EL  L  
Sbjct: 7   TKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPP 66

Query: 74  -------RSMPVPVSPLAI----RNRQPSTSPPGWEQQQLTNK----------------- 133
                   ++P   SP  +      R P+ SP  W Q Q  ++                 
Sbjct: 67  PQAASSSPTVPAAHSPFLLSRQNSGRCPAPSPSSWAQAQPFSRSNSMGNGGAADEMVGAG 126

Query: 134 ---------------HTPDYISLGYHDSSMYDLQNAANLFCLEDHMEQSNSG--LSSFD- 193
                          + P +   G  D+ + D +    L  L D     N G  L +FD 
Sbjct: 127 EELMSPLNGGGGAAANAPPFFPRG-GDALLDDFELQEQLAFLHDGAGGVNPGHALQAFDG 186

Query: 194 --C-----SYADNMLN---SFSTRNTRHYSNV---------PDFQPRTCHYYNKGFCKHG 253
             C       +  ML    +++     H  +            F  + C YY +GFCK+G
Sbjct: 187 AECRSPGPGESGGMLPYGLAWANGGPGHRRSASVNELCLGGDGFGWKPCLYYARGFCKNG 246

Query: 254 NSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 313
           ++CR++H  L   +             D + R               KS+R  P +    
Sbjct: 247 STCRFVHGGLSDDAAMDATTAEQQQCQDFLLRS--------------KSQRLGPAAFPFT 306

Query: 314 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVIL---A 373
           P              G L  S        SL      L+   Q  D      A ++    
Sbjct: 307 P-------------TGSLPASPSATSKCLSLL-----LQQQQQHNDNQRAAAAALMLAGG 366

Query: 374 EDAPKFMDH-RKDRNDPGPIVS-SARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIP 433
           ++A KFM   R DR D   +++  +RQIY+TFPADSTF E+DVS+YFS+ YG V DVRIP
Sbjct: 367 DEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSI-YGPVHDVRIP 426

Query: 434 CQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQ 469
            QQ+RMFGFVTF   ETVKLIL+  + H IC ARVLVKPY+EK K+ + KY+   +QQ  
Sbjct: 427 YQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD-KYR---KQQQG 486

[Close]

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot
Match: Q10M00 (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0328900 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 8.7e-38
Identity = 170/543 (31.31%), Postives = 240/543 (44.20%), Query Frame = 0


Query: 14  TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRS 73
           T+ VF RI  +DPD+  KI+G LL+ D+GD+EM RLA   E+ +  V+  A+ EL  L  
Sbjct: 7   TKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKELALLPP 66

Query: 74  MPVPVS-----PLA----IRNRQPS-------------TSPPGWEQQQ---LTNKHTPDY 133
            P P S     P A    + +RQ S             +SP  W Q Q    +N    + 
Sbjct: 67  PPPPSSSSPTVPAAHSPFLLSRQNSGRGPAPSPSPLSASSPSSWAQAQPFSRSNGSVDEV 126

Query: 134 ISLGYH-----------------------DSSMYDLQNAANLFCLEDHMEQSNSGLSSFD 193
           +  G                         D  + D Q    L  L +     +  L  FD
Sbjct: 127 VGAGEELISPANSGGGAAANAPPFFPRGGDVLLDDFQLQEQLAFLNEGGVNPSHPLQGFD 186

Query: 194 CS---------------YADNMLNSFSTRNTRHYSN--------VPDFQPRTCHYYNKGF 253
            +               Y     N           N           F  + C YY +GF
Sbjct: 187 GAECRSPGPGEGGGMFPYGLGWANGGPGHRRSASVNELCLGGGSSDGFGWKPCLYYARGF 246

Query: 254 CKHGNSCRYLHSN---LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGS 313
           CK+G+SCR++H +    + G+             D + R               KS+R  
Sbjct: 247 CKNGSSCRFVHGDDAAALTGAAMDAATAEQQQCQDFLLRS--------------KSQRLG 306

Query: 314 PISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHA 373
           P   A+ P   Y   G +  +    T+          L+ LL +  N  Q   R     A
Sbjct: 307 P---AAFP---YSPTGSLPGSPSAATK---------CLSLLLQQQHNDNQ---RAAAAAA 366

Query: 374 VIL--AEDAPKFMDH-RKDRNDPGPIVS-SARQIYMTFPADSTFTEDDVSDYFSVHYGMV 433
           ++L  +++A KFM   R DR D   +++  +RQIY+TFPADSTF E+DVS+YFS+ YG V
Sbjct: 367 LMLGGSDEAHKFMGRPRLDRVDFASMMNPGSRQIYLTFPADSTFREEDVSNYFSI-YGPV 426

Query: 434 EDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQER 469
            DVRIP QQ+RMFGFVTF   ETVKLIL+  + H IC ARVLVKPY+EK K+ + KY   
Sbjct: 427 HDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPD-KY--- 486

[Close]

BLAST of CsGy3G004420 vs. NCBI nr
Match: XP_011650493.1 (zinc finger CCCH domain-containing protein 18 [Cucumis sativus])

HSP 1 Score: 1117 bits (2889), Expect = 0.0
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0


Query: 1   MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 60
           MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV
Sbjct: 1   MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 60

Query: 61  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 120
           VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD
Sbjct: 61  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 120

Query: 121 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 180
           LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK
Sbjct: 121 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 180

Query: 181 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 240
           GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP
Sbjct: 181 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 240

Query: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 300
           ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV
Sbjct: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 300

Query: 301 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 360
           ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI
Sbjct: 301 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 360

Query: 361 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 420
           PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH
Sbjct: 361 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 420

Query: 421 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 480
           QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN
Sbjct: 421 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 480

Query: 481 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 540
           QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH
Sbjct: 481 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 540

Query: 541 MELNLESEGYNLPESPF 557
           MELNLESEGYNLPESPF
Sbjct: 541 MELNLESEGYNLPESPF 557

[Close]

BLAST of CsGy3G004420 vs. NCBI nr
Match: KAE8650111.1 (hypothetical protein Csa_010721 [Cucumis sativus])

HSP 1 Score: 1094 bits (2830), Expect = 0.0
Identity = 547/551 (99.27%), Postives = 548/551 (99.46%), Query Frame = 0


Query: 1   MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 60
           MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV
Sbjct: 1   MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 60

Query: 61  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 120
           VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD
Sbjct: 61  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 120

Query: 121 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 180
           LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK
Sbjct: 121 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 180

Query: 181 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 240
           GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP
Sbjct: 181 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 240

Query: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 300
           ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV
Sbjct: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 300

Query: 301 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 360
           ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI
Sbjct: 301 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 360

Query: 361 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 420
           PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH
Sbjct: 361 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 420

Query: 421 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 480
           QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN
Sbjct: 421 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 480

Query: 481 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 540
           QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH
Sbjct: 481 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 540

Query: 541 MELNLESEGYN 551
           MELNLE +  N
Sbjct: 541 MELNLERKELN 551

[Close]

BLAST of CsGy3G004420 vs. NCBI nr
Match: KAA0065766.1 (zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 984 bits (2545), Expect = 0.0
Identity = 502/541 (92.79%), Postives = 521/541 (96.30%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 360

Query: 368 MFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFAS 427
           MFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ QDYFA 
Sbjct: 361 MFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ-QDYFAP 420

Query: 428 HYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQ-RELERSLSEMTLVQKSVVNQPYFS 487
           HYN+LESEQLHSI RGYDFPPTMLRLRMEEQQQQQ R LERSLSEMTLVQKSVVNQPYFS
Sbjct: 421 HYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQRALERSLSEMTLVQKSVVNQPYFS 480

Query: 488 YQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNHMELNL 546
           YQMNELK+PVPE TESF+HLMDILNVLNSG+NSSSSSTDDNKQ P PQN+TDWNH+ELNL
Sbjct: 481 YQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSSTDDNKQ-PQPQNMTDWNHIELNL 535

[Close]

BLAST of CsGy3G004420 vs. NCBI nr
Match: XP_008449070.1 (PREDICTED: zinc finger CCCH domain-containing protein 18-like [Cucumis melo])

HSP 1 Score: 979 bits (2530), Expect = 0.0
Identity = 501/541 (92.61%), Postives = 521/541 (96.30%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVINSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 360

Query: 368 MFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFAS 427
           MFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ QDYF S
Sbjct: 361 MFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ-QDYF-S 420

Query: 428 HYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQ-RELERSLSEMTLVQKSVVNQPYFS 487
           HYN+LESEQLHSI RGYDFPPTMLRLRMEEQQQQQ R LERSLSEMTLVQKSVVNQPYFS
Sbjct: 421 HYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQRALERSLSEMTLVQKSVVNQPYFS 480

Query: 488 YQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNHMELNL 546
           YQMNELK+PVPE TESF+HLMDILNVLNSG+NSSSSSTDDNKQ P PQN+TDWNH+ELNL
Sbjct: 481 YQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSSTDDNKQ-PQPQNMTDWNHIELNL 534

[Close]

BLAST of CsGy3G004420 vs. NCBI nr
Match: TYJ96506.1 (zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 969 bits (2505), Expect = 0.0
Identity = 502/570 (88.07%), Postives = 521/570 (91.40%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYF------------------ 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYF                  
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFRQMLNACICLGLLMFQFA 360

Query: 368 -----------SVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVL 427
                      SVHYGMVEDVRIPCQQRRMFGFVTFHS+ETVKLILSDDSEHLICGARVL
Sbjct: 361 HIDLILIMCDCSVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVL 420

Query: 428 VKPYREKSKLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQ 487
           VKPYREKSKLLERKYQERIEQQ QDYFA HYN+LESEQLHSI RGYDFPPTMLRLRMEEQ
Sbjct: 421 VKPYREKSKLLERKYQERIEQQ-QDYFAPHYNNLESEQLHSIARGYDFPPTMLRLRMEEQ 480

Query: 488 QQQQ-RELERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGS 546
           QQQQ R LERSLSEMTLVQKSVVNQPYFSYQMNELK+PVPE TESF+HLMDILNVLNSG+
Sbjct: 481 QQQQQRALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTESFDHLMDILNVLNSGT 540

[Close]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL
Match: A0A0A0L4W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1)

HSP 1 Score: 1117 bits (2889), Expect = 0.0
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0


Query: 1   MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 60
           MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV
Sbjct: 29  MPVYEKFMEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKV 88

Query: 61  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 120
           VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD
Sbjct: 89  VMLAKTELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYD 148

Query: 121 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 180
           LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK
Sbjct: 149 LQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNK 208

Query: 181 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 240
           GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP
Sbjct: 209 GFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSP 268

Query: 241 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 300
           ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV
Sbjct: 269 ISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAV 328

Query: 301 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 360
           ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI
Sbjct: 329 ILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRI 388

Query: 361 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 420
           PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH
Sbjct: 389 PCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQH 448

Query: 421 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 480
           QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN
Sbjct: 449 QDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELERSLSEMTLVQKSVVN 508

Query: 481 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 540
           QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH
Sbjct: 509 QPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNH 568

Query: 541 MELNLESEGYNLPESPF 557
           MELNLESEGYNLPESPF
Sbjct: 569 MELNLESEGYNLPESPF 585

[Close]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL
Match: A0A5A7VHD9 (Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00570 PE=4 SV=1)

HSP 1 Score: 984 bits (2545), Expect = 0.0
Identity = 502/541 (92.79%), Postives = 521/541 (96.30%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 360

Query: 368 MFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFAS 427
           MFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ QDYFA 
Sbjct: 361 MFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ-QDYFAP 420

Query: 428 HYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQ-RELERSLSEMTLVQKSVVNQPYFS 487
           HYN+LESEQLHSI RGYDFPPTMLRLRMEEQQQQQ R LERSLSEMTLVQKSVVNQPYFS
Sbjct: 421 HYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQRALERSLSEMTLVQKSVVNQPYFS 480

Query: 488 YQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNHMELNL 546
           YQMNELK+PVPE TESF+HLMDILNVLNSG+NSSSSSTDDNKQ P PQN+TDWNH+ELNL
Sbjct: 481 YQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSSTDDNKQ-PQPQNMTDWNHIELNL 535

[Close]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL
Match: A0A1S3BL77 (zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=LOC103491050 PE=4 SV=1)

HSP 1 Score: 979 bits (2530), Expect = 0.0
Identity = 501/541 (92.61%), Postives = 521/541 (96.30%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVINSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRR 360

Query: 368 MFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFAS 427
           MFGFVTFHS+ETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ QDYF S
Sbjct: 361 MFGFVTFHSIETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQ-QDYF-S 420

Query: 428 HYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQ-RELERSLSEMTLVQKSVVNQPYFS 487
           HYN+LESEQLHSI RGYDFPPTMLRLRMEEQQQQQ R LERSLSEMTLVQKSVVNQPYFS
Sbjct: 421 HYNNLESEQLHSIARGYDFPPTMLRLRMEEQQQQQQRALERSLSEMTLVQKSVVNQPYFS 480

Query: 488 YQMNELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTDDNKQQPHPQNVTDWNHMELNL 546
           YQMNELK+PVPE TESF+HLMDILNVLNSG+NSSSSSTDDNKQ P PQN+TDWNH+ELNL
Sbjct: 481 YQMNELKLPVPEDTESFDHLMDILNVLNSGTNSSSSSTDDNKQ-PQPQNMTDWNHIELNL 534

[Close]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL
Match: A0A5D3BC66 (Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001530 PE=4 SV=1)

HSP 1 Score: 969 bits (2505), Expect = 0.0
Identity = 502/570 (88.07%), Postives = 521/570 (91.40%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS HT+TVFHRI QIDPDNVMKIIGFLLLHD+GDQEMARLALA+ESHIEKVVMLAKTE
Sbjct: 1   MEFSGHTKTVFHRIRQIDPDNVMKIIGFLLLHDDGDQEMARLALAHESHIEKVVMLAKTE 60

Query: 68  LHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANL 127
           LHQ RSMPVPVSPLAIRNRQ STSPPGWEQQQLTNKHTPDYI LGYHDS MYD+QN+ NL
Sbjct: 61  LHQRRSMPVPVSPLAIRNRQSSTSPPGWEQQQLTNKHTPDYIPLGYHDS-MYDIQNSVNL 120

Query: 128 FCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 187
           FCLEDH+EQS   LSSFDCSYA+N++NSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN
Sbjct: 121 FCLEDHLEQS---LSSFDCSYAENVMNSFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGN 180

Query: 188 SCRYLHSN-LVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 247
           SCRYLHSN L+PGSLSHLYN+NSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL
Sbjct: 181 SCRYLHSNNLLPGSLSHLYNSNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASL 240

Query: 248 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDA 307
           PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQHAVILAEDA
Sbjct: 241 PMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHAVILAEDA 300

Query: 308 PKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYF------------------ 367
           PKFMDHRKDRNDPG IVSSARQIYMTFPADSTFTEDDVSDYF                  
Sbjct: 301 PKFMDHRKDRNDPGSIVSSARQIYMTFPADSTFTEDDVSDYFRQMLNACICLGLLMFQFA 360

Query: 368 -----------SVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVL 427
                      SVHYGMVEDVRIPCQQRRMFGFVTFHS+ETVKLILSDDSEHLICGARVL
Sbjct: 361 HIDLILIMCDCSVHYGMVEDVRIPCQQRRMFGFVTFHSIETVKLILSDDSEHLICGARVL 420

Query: 428 VKPYREKSKLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQ 487
           VKPYREKSKLLERKYQERIEQQ QDYFA HYN+LESEQLHSI RGYDFPPTMLRLRMEEQ
Sbjct: 421 VKPYREKSKLLERKYQERIEQQ-QDYFAPHYNNLESEQLHSIARGYDFPPTMLRLRMEEQ 480

Query: 488 QQQQ-RELERSLSEMTLVQKSVVNQPYFSYQMNELKVPVPEATESFEHLMDILNVLNSGS 546
           QQQQ R LERSLSEMTLVQKSVVNQPYFSYQMNELK+PVPE TESF+HLMDILNVLNSG+
Sbjct: 481 QQQQQRALERSLSEMTLVQKSVVNQPYFSYQMNELKLPVPEDTESFDHLMDILNVLNSGT 540

[Close]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL
Match: A0A6J1L8K9 (zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111500284 PE=4 SV=1)

HSP 1 Score: 718 bits (1853), Expect = 5.67e-255
Identity = 391/558 (70.07%), Postives = 446/558 (79.93%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           MEFS + R VFHRI++IDP+NV  II F+LLHD+ DQEMARLALA + HI++VV L K +
Sbjct: 1   MEFSEYRRIVFHRISKIDPENVEDIICFILLHDHYDQEMARLALAPDHHIQQVVHLVKIQ 60

Query: 68  LH--QLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAA 127
           LH   LRSMP P  P       PS+SP  +    + + H P    L Y DS MY+LQN A
Sbjct: 61  LHLLALRSMPAPSPP-------PSSSPGAFVPFSIRDSHMP----LVYPDS-MYELQNPA 120

Query: 128 NLFCLEDHMEQSNSGLSSFDCSYADN--MLNSFSTRNTRHYSNVPDFQPRTCHYYNKGFC 187
             FCL+D +E SN GLSS+DCSY +N  M+N FS+R  RHYS + ++QPRTCHYY+KG C
Sbjct: 121 QFFCLDDCIEPSNRGLSSYDCSYVENAAMVNKFSSRTARHYSTMVEYQPRTCHYYSKGNC 180

Query: 188 KHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISI 247
           KHGNSCRYLHSN +PGS S +Y    NVNDDHVFRPGSLERLEFEIVELL+SRRGSPISI
Sbjct: 181 KHGNSCRYLHSNQMPGSFSQMY----NVNDDHVFRPGSLERLEFEIVELLRSRRGSPISI 240

Query: 248 ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILA 307
           ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK+SIQVIDRPHGQH+VILA
Sbjct: 241 ASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKSSIQVIDRPHGQHSVILA 300

Query: 308 EDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQ 367
           EDA KF+DHRKD+N+  P VSSARQIYMTFPADS+FTEDDVSDYFS+HYG+VEDVRIPCQ
Sbjct: 301 EDALKFIDHRKDKNNTSPTVSSARQIYMTFPADSSFTEDDVSDYFSIHYGLVEDVRIPCQ 360

Query: 368 QRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQD- 427
           QRRMFGFVTFHS+ETVKLILS+DSEHLICGARVLVKPYREKSKLLERK Q+RIEQQ Q  
Sbjct: 361 QRRMFGFVTFHSVETVKLILSEDSEHLICGARVLVKPYREKSKLLERKNQDRIEQQQQQA 420

Query: 428 YFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQR-ELERSLSEMTLVQKSVVNQ 487
           YF+SHYNSLE EQLHS    YD   T+LRLR+EEQQQQ   E+ERS SEMTL+ KS  N 
Sbjct: 421 YFSSHYNSLEPEQLHS---NYDSASTILRLRIEEQQQQHALEVERSFSEMTLMPKSATNC 480

Query: 488 PYFSYQMNELKVPVPEATESFEHLMDILNVLNS-GSNSSSSSTDDNKQQPHPQNVTDWNH 547
            YFSYQM EL++PVPE  ESF+ +M+I+   +  GS SSS  +    +Q  P N   WNH
Sbjct: 481 SYFSYQMKELRLPVPE--ESFDRMMNIMKSFSGPGSGSSSGCSSIVDEQKPPGNAAAWNH 537

Query: 548 MELNLE-SEGYNLPESPF 557
            ELNL+ SEGYNLP+SPF
Sbjct: 541 PELNLDNSEGYNLPDSPF 537

[Close]

BLAST of CsGy3G004420 vs. TAIR 10
Match: AT2G05160.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-105
Identity = 241/575 (41.91%), Postives = 336/575 (58.43%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLL-HDNGDQEMARLALANESHIEKVVMLAKT 67
           M F+     V  RI Q++P+N  KI G+LLL  +NG+++M RLA   +S +  V+   K 
Sbjct: 1   MNFTESMNVVHARIQQLEPENAAKIFGYLLLMQENGNRDMIRLAFCPDSVMCSVINCVKY 60

Query: 68  EL----HQLRSMP---VPV---------SPLAIRNRQPSTSPPGWEQQQLTNKHTPDYIS 127
           EL    H   S P   +P          SPL++     S SPP               + 
Sbjct: 61  ELARNSHHYHSPPSDHIPTPKFGSFTGSSPLSV-----SVSPP---------------MK 120

Query: 128 LGYHDSS--MYDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVP 187
            G+ ++S  M  LQN       ED +         F   +          R +R   ++P
Sbjct: 121 TGFWENSTEMDTLQNNLQFLNFEDPLTS-----PEFSNGFFSQERQCLPLRTSRRSPSLP 180

Query: 188 DFQPRTCHYYNKGFCKHGNSCRYLHSNLVP--GSLSHLYNTNSNVND-DHVFRPGSLERL 247
           +F  + CHY+NKGFCKHGN+CRY H  ++P   S + ++N N+N++D +HV  P SLE+L
Sbjct: 181 EFPVKICHYFNKGFCKHGNNCRYFHGQIIPERESFAQMFNPNNNLSDEEHVVSPVSLEKL 240

Query: 248 EFEIVELLKSRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLK 307
           E EI+ELLK RRG+PISIASLPM+YYEKYG+ LQAEGYLTESQRHGK+G+SLTKLL RLK
Sbjct: 241 EGEIIELLKLRRGAPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLK 300

Query: 308 NSIQVIDRPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVS 367
           N+I+++DRPHGQH+VILAEDA KF+++  +RN+ G I++ +RQIY+TFPA+S+FTE DVS
Sbjct: 301 NTIRLVDRPHGQHSVILAEDASKFVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVS 360

Query: 368 DYFSVHYGMVEDVRIPCQQRRMFGFVTFHSMETVKLILSDDSEHLICGARVLVKPYREKS 427
            YF+  YG VEDVRIPCQQ+RM+GFVTF S ETVK IL+  + H IC ARVLVKPYREKS
Sbjct: 361 IYFT-SYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKS 420

Query: 428 KLLERKYQERIEQQHQDYFASHYNSLESEQLHSIGRGYDFPPTMLRLRMEEQQQQQRELE 487
           +    +Y +  +  H   + S +   + E           PP +       +  + R+  
Sbjct: 421 R--SSRYLDNYKPLHGMRYGSKFIERDIEM-------NTLPPRV------SESSRMRKPF 480

Query: 488 RSLSEMTLVQKSVVNQPYFSYQMNELKVPV-PEATESFEHLMDILNVLNSGSNSSSSSTD 547
            S  E ++ +    N  Y  +  ++ K+    E  E  E L  +L+ LN+  N  + +T+
Sbjct: 481 LSEPEQSVSKSLPTNYSYLGFSSDDFKLTSNAEQEEQAERLSYLLDYLNTEDNVMNITTN 524

Query: 548 --DNKQQPHPQNVTDWNHMELNLESEGYNLPESPF 558
             DN ++ H +          +L+S+  NLPESPF
Sbjct: 541 YRDNDRRTHCE----------SLDSQVLNLPESPF 524

[Close]

BLAST of CsGy3G004420 vs. TAIR 10
Match: AT3G52980.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 323.2 bits (827), Expect = 4.2e-88
Identity = 185/386 (47.93%), Postives = 247/386 (63.99%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLL-HDNGDQEMARLALANESHIEKVVMLAKT 67
           M F+     V +RI+Q++P+N  KIIG+LLL  D  D++M RLA   +S +  ++   K 
Sbjct: 1   MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDQNDRDMIRLAFCPDSVMRSMINCVKC 60

Query: 68  ELHQLRSMPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYH--------DSSM 127
           EL +        S   I+ R+  +      Q  L +   P  +S+G          DSS+
Sbjct: 61  ELAKNSHYNNIPSSDHIQIRKFGSLSGSSNQSLLVSASPPSVLSMGTSFWENTNDMDSSL 120

Query: 128 YDLQNAANLFCLEDHMEQSNSGLSSFDCSYADNMLNSFSTRNTRHYSNVPDFQPRTCHYY 187
            D  N       ED +         F  S+      S S R +R   ++P+F  + CHY+
Sbjct: 121 KD--NVQYFLDFEDSVTS-----PEFSTSFFSQKKQSLSLRTSRRSLSLPEFPLKICHYF 180

Query: 188 NKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRG 247
           NKGFCKHGN+C   H+NL               +++HV  PGSLE+LE EI+ELLKSRRG
Sbjct: 181 NKGFCKHGNNC---HNNL--------------SDEEHVVSPGSLEKLEREIIELLKSRRG 240

Query: 248 SPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQH 307
           +PISIA LPM+Y+EKYG+ LQAEGYLTESQRHGK+GFSLTKLL RLKN+I++IDRPHGQH
Sbjct: 241 APISIAFLPMMYHEKYGRSLQAEGYLTESQRHGKAGFSLTKLLARLKNTIRLIDRPHGQH 300

Query: 308 AVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHYGMVEDV 367
           +VILAED  KF+++  +R++ G I++ +RQ+Y+TFPA+S+FTE DVS+YFS   G VEDV
Sbjct: 301 SVILAEDVSKFVEYTGERSEHGAILAGSRQVYLTFPAESSFTEHDVSNYFS-EVGPVEDV 360

Query: 368 RIPCQQRRMFGFVTFHSMETVKLILS 385
           RIPCQQ+RM+GFVTF  METVK IL+
Sbjct: 361 RIPCQQKRMYGFVTFVYMETVKRILA 361

[Close]

BLAST of CsGy3G004420 vs. TAIR 10
Match: AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-38
Identity = 166/551 (30.13%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 14  TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRS 73
           TR V  RI  +DP+N  KI+G LLL D+G++EM RLA   E+ +  V++ AK EL  +  
Sbjct: 7   TRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKELGLMNC 66

Query: 74  MPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANLFCLEDH 133
              P S     ++    SP       L     P Y + G    S  DL N   L  ++D 
Sbjct: 67  SRSPWS-----HQDELISPKNNRGSSLNPASLPFYANGG---RSSRDLTNDFEL--MDDM 126

Query: 134 MEQSNSGLSSFDCSYADNMLN--SFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGNSCRY 193
             +S   L S        +L+   +   +   +  VP      C Y+ +GFCK+G SCR+
Sbjct: 127 NSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP------CSYFARGFCKNGASCRF 186

Query: 194 LHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASLPMIYY 253
           +HS                  D      GS  R     +ELL+S    P           
Sbjct: 187 VHS------------------DGGADLVGSPSR-----IELLRSNSVPP----------- 246

Query: 254 EKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDAPKFMD 313
                   A  ++T S        SL    T+  N +Q  D      A+++ ++  K   
Sbjct: 247 ------RLAHHFMTRS--------SLPSFSTKGVN-LQQNDVQRAAAALMIGDELQKLGR 306

Query: 314 HRKDRNDPGPIVSSA-RQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRRMFGF 373
            R +R D   +   A RQIY+TFPADS F E+DVS+YFS  +G V+DVRIP QQ+RMFGF
Sbjct: 307 WRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFST-FGPVQDVRIPYQQKRMFGF 366

Query: 374 VTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFASHYNS 433
           VTF   ETVK IL+  + H +C +RVLVKPY+EK K+ + KY+   +   ++   +  +S
Sbjct: 367 VTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPD-KYRTN-QTTERELSPTGLDS 426

Query: 434 LESEQLHSIGRGYDFPPTMLRLRMEEQ--QQQQRELERSLSEMTLVQKSVVNQPYFSYQM 493
              + L   G   +    + R + EE+  + Q R L  +L  + + +   +N P   +  
Sbjct: 427 SPRDVLGGRGFYNNTQDVLWRSKFEEEILELQSRRL-MNLQLLDVKKHFQLNSPTNIHSP 471

Query: 494 NELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTD--DNKQQPHPQNVTDWNHMELNLE 553
           N    P  ++  S   L  I    + G     SS +  D+     P+ + D         
Sbjct: 487 N----PFSQSLISPRPLSVIKREYDGGEKGKGSSKEGSDDDTMNLPERLED--------- 471

Query: 554 SEGYNLPESPF 558
               +LP+SPF
Sbjct: 547 ----SLPDSPF 471

[Close]

BLAST of CsGy3G004420 vs. TAIR 10
Match: AT3G51950.2 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-38
Identity = 166/551 (30.13%), Postives = 246/551 (44.65%), Query Frame = 0


Query: 14  TRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTELHQLRS 73
           TR V  RI  +DP+N  KI+G LLL D+G++EM RLA   E+ +  V++ AK EL  +  
Sbjct: 7   TRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKELGLMNC 66

Query: 74  MPVPVSPLAIRNRQPSTSPPGWEQQQLTNKHTPDYISLGYHDSSMYDLQNAANLFCLEDH 133
              P S     ++    SP       L     P Y + G    S  DL N   L  ++D 
Sbjct: 67  SRSPWS-----HQDELISPKNNRGSSLNPASLPFYANGG---RSSRDLTNDFEL--MDDM 126

Query: 134 MEQSNSGLSSFDCSYADNMLN--SFSTRNTRHYSNVPDFQPRTCHYYNKGFCKHGNSCRY 193
             +S   L S        +L+   +   +   +  VP      C Y+ +GFCK+G SCR+
Sbjct: 127 NSRSTDFLGSVHARSGSCVLDGLGYGGDSDLGFGGVP------CSYFARGFCKNGASCRF 186

Query: 194 LHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLKSRRGSPISIASLPMIYY 253
           +HS                  D      GS  R     +ELL+S    P           
Sbjct: 187 VHS------------------DGGADLVGSPSR-----IELLRSNSVPP----------- 246

Query: 254 EKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVIDRPHGQHAVILAEDAPKFMD 313
                   A  ++T S        SL    T+  N +Q  D      A+++ ++  K   
Sbjct: 247 ------RLAHHFMTRS--------SLPSFSTKGVN-LQQNDVQRAAAALMIGDELQKLGR 306

Query: 314 HRKDRNDPGPIVSSA-RQIYMTFPADSTFTEDDVSDYFSVHYGMVEDVRIPCQQRRMFGF 373
            R +R D   +   A RQIY+TFPADS F E+DVS+YFS  +G V+DVRIP QQ+RMFGF
Sbjct: 307 WRPERIDLSAMACPASRQIYLTFPADSRFREEDVSNYFST-FGPVQDVRIPYQQKRMFGF 366

Query: 374 VTFHSMETVKLILSDDSEHLICGARVLVKPYREKSKLLERKYQERIEQQHQDYFASHYNS 433
           VTF   ETVK IL+  + H +C +RVLVKPY+EK K+ + KY+   +   ++   +  +S
Sbjct: 367 VTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPD-KYRTN-QTTERELSPTGLDS 426

Query: 434 LESEQLHSIGRGYDFPPTMLRLRMEEQ--QQQQRELERSLSEMTLVQKSVVNQPYFSYQM 493
              + L   G   +    + R + EE+  + Q R L  +L  + + +   +N P   +  
Sbjct: 427 SPRDVLGGRGFYNNTQDVLWRSKFEEEILELQSRRL-MNLQLLDVKKHFQLNSPTNIHSP 471

Query: 494 NELKVPVPEATESFEHLMDILNVLNSGSNSSSSSTD--DNKQQPHPQNVTDWNHMELNLE 553
           N    P  ++  S   L  I    + G     SS +  D+     P+ + D         
Sbjct: 487 N----PFSQSLISPRPLSVIKREYDGGEKGKGSSKEGSDDDTMNLPERLED--------- 471

Query: 554 SEGYNLPESPF 558
               +LP+SPF
Sbjct: 547 ----SLPDSPF 471

[Close]

BLAST of CsGy3G004420 vs. TAIR 10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 149.4 bits (376), Expect = 8.3e-36
Identity = 136/487 (27.93%), Postives = 220/487 (45.17%), Query Frame = 0


Query: 8   MEFSAHTRTVFHRINQIDPDNVMKIIGFLLLHDNGDQEMARLALANESHIEKVVMLAKTE 67
           M+    T  +  +I  ++PD   KIIG+LLLHD GD+++  LA   ES ++  +   K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 68  L--------HQLRSMPVPVSPLA-----------------IRNRQP----STSPPGW--- 127
           L            + P P++P+                   R   P    STSP  +   
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHSNGFMDFRRNSPSSPSSTSPWSFNNC 120

Query: 128 ------EQQQLTNKHTPDYISLGYHDSS--------MYDLQNAANLFCLEDHMEQSNSGL 187
                     ++ KHTP       H S+          D    A+L  L+D  +Q N  L
Sbjct: 121 INGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADL--LDD--QQLNDCL 180

Query: 188 SSFD--CSYADNML------------NSFSTRNTRHYSNVPDFQP---------RTCHYY 247
           S  D  CS  ++++            +  +  + R +S    F           + C Y+
Sbjct: 181 SFLDDSCSKTEDLVDPSIPLDYSVDGDGETHLHRRSFSCDASFVSGDDGFGGGCKPCVYF 240

Query: 248 NKGFCKHGNSCRYLHSNLVPGSLSHLYNTNSNVNDDHVFRPGSLERLEFEIVELLK---- 307
           ++G CK+G SC+++H           Y  N + N      P  +E    +  E+++    
Sbjct: 241 SRGLCKNGESCKFIHGG---------YPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLA 300

Query: 308 --SRRGSPISIASLPMIYYEKYGKVLQAEGYLTESQRHGKSGFSLTKLLTRLKNSIQVID 367
              +R +   +   P + YEK    L  +     +QR G   F   +  +     ++ ++
Sbjct: 301 YQQQRLASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRLERME 360

Query: 368 RPHGQHAVILAEDAPKFMDHRKDRNDPGPIVSSARQIYMTFPADSTFTEDDVSDYFSVHY 420
                              H  D+++     S++RQIY+TFPADSTF ++DV+ YFS+ +
Sbjct: 361 ----------------LAMHLGDQSN-----SASRQIYLTFPADSTFKDEDVATYFSL-F 420

The following BLAST results are available for this feature:

BLAST of CsGy3G004420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ41	1.8e-104	41.91	Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6ZK57	7.5e-74	44.90	Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica OX...	[more]
Q84ZT0	4.2e-48	47.52	Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. ja...	[more]
Q10LZ9	7.1e-40	31.03	Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX...	[more]
Q10M00	8.7e-38	31.31	Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CsGy3G004420 vs. NCBI nr


Match Name	Identity	Description
XP_011650493.1	100.00	zinc finger CCCH domain-containing protein 18 [Cucumis sativus]	[more]
KAE8650111.1	99.27	hypothetical protein Csa_010721 [Cucumis sativus]	[more]
KAA0065766.1	92.79	zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa]	[more]
XP_008449070.1	92.61	PREDICTED: zinc finger CCCH domain-containing protein 18-like [Cucumis melo]	[more]
TYJ96506.1	88.07	zinc finger CCCH domain-containing protein 18-like [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G004420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W6	0.0	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061520 PE=4 SV=1	[more]
A0A5A7VHD9	0.0	92.79	Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BL77	0.0	92.61	zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3BC66	0.0	88.07	Zinc finger CCCH domain-containing protein 18-like OS=Cucumis melo var. makuwa O...	[more]
A0A6J1L8K9	5.67e-255	70.07	zinc finger CCCH domain-containing protein 18-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CsGy3G004420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05160.1	1.3e-105	41.91	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT3G52980.1	4.2e-88	47.93	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT3G51950.1	4.0e-38	30.13	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT3G51950.2	4.0e-38	30.13	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]
AT5G12440.1	8.3e-36	27.93	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 454..474
None	No IPR available	GENE3D	4.10.1000.10		coord: 166..239 e-value: 3.0E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 513..537
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 8..557
None	No IPR available	PANTHER	PTHR24009:SF23	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 8..557
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 328..399 e-value: 3.8E-5 score: 33.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 338..381 e-value: 3.6E-5 score: 23.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 327..403 score: 9.882637
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 169..195 e-value: 0.0085 score: 25.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 172..194 e-value: 1.8E-4 score: 21.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 169..196 score: 14.455084
IPR025605	OST-HTH/LOTUS domain	PFAM	PF12872	OST-HTH	coord: 221..298 e-value: 8.3E-11 score: 41.6
IPR025605	OST-HTH/LOTUS domain	PROSITE	PS51644	HTH_OST	coord: 221..304 score: 11.153278
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 334..407 e-value: 2.5E-9 score: 39.1
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 172..194
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 338..425

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G004420.2	CsGy3G004420.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding