CsGy3G004350 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G004350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein CWC15 homolog
Location	Gy14Chr3: 3510762 .. 3516188 (-)
RNA-Seq Expression	CsGy3G004350
Synteny	CsGy3G004350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCATTTGGAATTTTTTGGAGAGAGTGACCCGTTTTGTAAGATAGTCATAGAACAATCTTCCTCACCCACCCACCATTTTTCTCTTCGTTCGGCCTTCCAAATCCGCACACAGATCATCAATCACTTTGAAATTAAACTTCTGAGGTAATTCTCTTACCATTCCTCTTCTATTTTCTGTAATTCAAGCATCGAGATTCGTTTTCTCTTCGCTCAATTCGATTCCAATCAAGTTTATCGACCTAGGGTTTCCTCTACTTCCTTTCTTTATCTTACGAATATGTTGAATCTCAAGTACTTTCTTCCGTTTTCTTAGCATTTTGAAGGGTCGAGGCGACGAGGAAACAATTTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGTACTCGAATTTTCGGCCCATCGCAGAAATATTCGTCCAGAGATATCGCTTCTCATACGACCTTGAAACCCAGGTGCGTGTATTTAAGAGATGTTGTTACCTGTATTGGGAAGATGGGGGCAGAGGGGGTATTTATTATAGCTTGATGGTCATGTTTTTTCATTGACTTCTTCTTTGGTTGAGTTCTTTATACCGAGTTCTCTGTTTCTTACTTGTTTATAATTTTCTGTTTCTTAGTTGTTTATAATCCTCTGTGCTTTGTGACTTCTGAGGGATAATAATCGCACGTCCACACAGGAATTCATTGTGGTGGTGGTGGGGGGTTGTCTGTGATGTGCGTTGGGTTTTCTAGTGGGTGTGGAGTTCTTAACTGGAATTCTAAAAACTGAACTGGATTACGGGTAGGCTGGAATCTTCTTTCTAATAACTGAGTTGGTTTTCAATGTGGATGCGATCTGTTGGACAAAATCTTCATTCAGCTCTCCTTGATCTTAGCTTAGGTGAACTTGGTTTTGATAATCTGGTATAAACGGCTCAACTTCTTACATTATGTAAATGGTCCATACCCACTAATTCTCGAGAAACTTTGCTCACTCAGAAAAACAAAGTTTTTAATACATTAACCCTTCCACTTCTTGCTTGAACTCAAAACTTTGGACAATGTCTTGAACATACCAAGTCCTTAGCTCCTTACCTTTGATTACTGTGTGTATTTAGGGTGTGTGGAACTTAGAATGATTTTAATTAATTGGGCATTCACTGCAGTTCATCATCGTTTTTTTTTATTCACAAGAATAATGATCATTTAATATCTAATTAATTTTCCTAGTCACACATCTTGTGGGTTAGGAAGGTTAGCTCATGAAAAGTCATGCTCTGCATTTTCTTTTTGTATTGATCTGGCTCTAAAAGAATTGAACTGTTCCTACCACTTTTTTTTTTGGATAAAAAATATATTTATCGATGAATGAAATATCCAAATGGAATGCAAAAAGGACCTTTCATAGAGAGTAGGAATACAAAAGATGTTTCCATTTTGCAACTAAGAAATTTAAGTTGTGATCTTTTAGAGTGTGTAGCTTTTTACACCAACAAAGAGAAAAATGTTTCATTCACCACACACCTTTAGGTGGAGGCTAGGCCCTAGGGAGGCCAACTCATGAAAAGTCATGGGCTGTGCTTTCTTTCTATATCGATCAGACTTCAAAAGAATTGGACTGTTCCTACAACTTTGAATGAAGTATCCGAAAGGAATACTAAAAGGGCCTTTCAAAGGGAGTAGGAATACAAAAGATGTTTCCAATTTGCAACTAAGAAATTTAATTTGTGATCTTTTGGAGGGTGTAGCCGGTTACACCAATAAAGAGAAAAATAGATGTGTCAGTGATTTTATTAGTTCTCTGTGAAATTGTCTCTTTAAGACCTTTGGAGCCGCATTGGTGTGTAATAGTGGATGTTGTTCAATATTTGAGGAGGTGCTCTTGAATCATCTTTTCCATGAAAAAGGAAGAGTTCTTCAACGATATTTCTTTTTTGCCATTTGTGCAACATTTGGCTTAATTTCTCTAGAATTTTTTATGGGGTAAGGAAGTTGCGGGAGGAGCTTTAGGAGTTGAGGTTTTATTTCTCTTTATGGGAGCGTTCACAGGACTTTTTGTAATTATTAGCTTGGCCTTATTCTTTTCGATTGTACCTCTTCTGTAATTGGGCATAGGGTTTGTTTTTTGGACTTGGTTTTTTGTATGTCGTTGTCCTTTTTATCATTCTTAATGGAAGCTTGGTTTTTTTATAAAAGAACAATATTTCAATGAAAGTTGGCCAAGGAAAAAAAAGCTGTAGTTGGCCAATGGCCACGTCTTGTATTCTCCACCTACTAATAATTGATAAGAAACTTTTTTTCCAATGAAAAAATGAAACCTTGAATGTCATCTAGAAATTGTAACCAATCACCCTATTCTATATTCAACAAGTTGGTGAAGCACTCAAAGTGATCAATATGCTTAAAAATCATTTTGCTGTCTCAAAATTTATTACTTTTGTTAAACTTGTGTCTATTTAGTATACTTAACTAGTGTTGGATGCATGTCTAAGTCTAACTATAGAACCCAAATATATTGAAATATAAACAAAATTAGAAATACAAATTAAAGTGTTTAAGGTACTTGGACTCTCCCTTTCTTGATATCTCTCCCAAGCCCTGAATCACTAACCAACGTATAGCTTCCCTTCCTCATTCCTCTTCTATCCATTTATAACCAAATTTCATAGAAAAAACTCTAGCAAATCACTAACATACCTTTACTACCTATTAATATCCCTGTTTCTTAACCTAATATTGTTTTTATAAAAATGTCAGACCTACTTTCTCTTTGTAATATGGTGTCCAACACATTAATTGCACTAACTAGTGTTCGATATGTGTCACCAACACATGGACACGTGCCACGCTACCCAAACTAAACTGTTTCTTCCCTTCTTCATTCCCCTTCTATCTATTTTATAACCAAATTTCATAGAAAGCTCTAGCTAATTACTAACATGTCCTTAGCACCTACAATATCCCTATTTCTTATCCTAATATCATTTCTATTGAAATGCTGGACCTACTTAACTTTGTAAATATGGTATCTTAACACATTTATTGCACTAACTGTATTCGGTATGTTTCCATTGGCCAACGTGTCACGCTATCCTAACTAAAGTGCCCCTGGTTTCTTAGTTTATAATTGGGGGACCCATAATTTTTATTTAAGAATTCAGTCAACCCTCCAGAAACATCATGAATAGCTGAGTCTCTACATACGAGAAGAGAGTGCCATCAACAAGTTTCTACAATTATAGTTACTGAGTACTTTAACCTAGAATCACAGATGTGCTATATCAGCCCTGTTCTTCTCTCAAAACGAGCATCCACTACTCTATTTGTTGTTGGCAAATGGCTATTTTCTTTCTTTTATGTTTCCTTCGATATATTCTTCCAAGATTCAGATCTCTAAACACTTGTCATTAATCATGTATGTAGAAAGGAAGGACAAGATACCCATGACGAATTGCAGAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAGAGGAGGCATTTTTCATCAAAAAACAAGTCATATGGTAAAGACATCCATTCTTTGTTGGCTTTCATGTCAGTTATGGTTTTGTTCAAAATTGCCTTCTCCATGCTGTGTTTTATGATGTTTTTGCAATGAGTATATCATGTTTCACTTGCATAATTTGCAGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGAACATATCATCTCCTTTTTGCTTATTACATTCACTGACACGTCCATAAATTGTTTGTAACCAGTTATTATTTATGCTTTTAGGTGGAAAGAGAGATATTGAAGATCGTATTATACCACGAAGTTTAGATGCTGACGATTCTGATGTGGATGTCAAAAGTGATGATGAGAGGTTTCTTAGCTGACTTTCTGTTTTGTGAATTTTAATCATACTTGTTTTCTATCCTTTTCTCTTTATACTTATTAGAGAAAGTCTTAGTTTCTCTGGCTTTTTACAATTCAAATCCTTGGTCAAAGACCTGTTAATCTACTTTGTTGTGGGGTTTAGTATTGAAGTACATAATGTTTTTTGGTAGTGATGATGACGACGACGATGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAAGAAAGAGCAGAGGAAAAGCTTCGGAAGGTGAGCCTTTAGTCGATCCAGATAGCTATGATCTGAAATTGTGCTTGCAGTACCCTTTTTATTCTCCAAGATTATGCACCATGTGTTGAGTGATTAGTGAGTGACTAGGATCACTCGAATGATGAGTCCTTGAATCTTTCTGATTTTGAATTTTACTTCATCAGTTGCTTAAATATGTGTGTTATGATGTATAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAATTACTCCGAGGAAATCCACTGCTTAACGAGCAGCCCTCCTCTTTTAGCGTCAAAAGAAGGTTAGTTAGCCTGATTTATTCCCATTTTCTATAACTAGTTTGTTTCGTGTATATAATATGTGAACTTCTATCTGATGATTCAACTTATTTTGAACTTTTGGGTCAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCTCGTGGCGAATCAAAGACTCCTAAGCGCTTTATAAATGATACAATTAGGAATGACTTCCACAGAAAATTCTTGCAGAAGTACATGAAGTAACATGGTTTGGTTATCAAAGATGAACACATATGTATGATAATGCATTGAACAGACTAAATATCACTTGAATGTTTTAGTTTGTCTTCTGAATTGGATGAAGTACAAGGGATTGGACGAATGAATATTAAAACGGTTTCATAAGAACCTGTCTTAGCTCATATTTTACATGGTAACGATGTTTTTGTGTTCAAATATTAGATTGGCTGATTCTTTTGTGCAAGCAGAAGTAGGCACATATTCTGTAGGCAAGGACCATGGCTAGGAGAATCCAGACCTCTTGTAAGCTGCTGTTGAGGTCGACGGTGTCAAAGGAAGAAGAAGACTGCAGAGTTCTGCAGCCTTGTTTTGTTTGACATTCATATAACTGATCTCCTGAATATTGCACTTTTAGAAGTAGTCTGAACCCATAATACATGAATGATATATATTTCATCCACCGCATGAACTTGGGTATATGCTGCCATAGGAAGAAGAAAATAGAAAAGGTTCATATAAATCATTCAGTGGGGGCCTTTTTTTTTTTTTCCTTTAAACCATAATTAGGTTCTTAATAGGTTTTTAAATTTCTGACATGTCATGTTCGATCTACGTGAGTCGATATTTTTTTGCTATGCTTTAATAAGTTTTTTAAAGAGTAAATTGCAAAAAAAAAGCTTCAAGAAGTTGTCATTATGCCATTAATTTTTCAATTGTAAGTTAGATTCCTAAAACTTACAAAAGTTGAGCCATAAAATTGAACTAC

mRNA sequence

GGGCATTTGGAATTTTTTGGAGAGAGTGACCCGTTTTGTAAGATAGTCATAGAACAATCTTCCTCACCCACCCACCATTTTTCTCTTCGTTCGGCCTTCCAAATCCGCACACAGATCATCAATCACTTTGAAATTAAACTTCTGAGCATTTTGAAGGGTCGAGGCGACGAGGAAACAATTTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGTACTCGAATTTTCGGCCCATCGCAGAAATATTCGTCCAGAGATATCGCTTCTCATACGACCTTGAAACCCAGAAAGGAAGGACAAGATACCCATGACGAATTGCAGAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAGAGGAGGCATTTTTCATCAAAAAACAAGTCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATACCACGAAGTTTAGATGCTGACGATTCTGATGTGGATGTCAAAAGTGATGATGAGAGTGATGATGACGACGACGATGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAAGAAAGAGCAGAGGAAAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAATTACTCCGAGGAAATCCACTGCTTAACGAGCAGCCCTCCTCTTTTAGCGTCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCTCGTGGCGAATCAAAGACTCCTAAGCGCTTTATAAATGATACAATTAGGAATGACTTCCACAGAAAATTCTTGCAGAAGTACATGAAGTAACATGGTTTGGTTATCAAAGATGAACACATATGTATGATAATGCATTGAACAGACTAAATATCACTTGAATGTTTTAGTTTGTCTTCTGAATTGGATGAAGTACAAGGGATTGGACGAATGAATATTAAAACGGTTTCATAAGAACCTGTCTTAGCTCATATTTTACATGGTAACGATGTTTTTGTGTTCAAATATTAGATTGGCTGATTCTTTTGTGCAAGCAGAAGTAGGCACATATTCTGTAGGCAAGGACCATGGCTAGGAGAATCCAGACCTCTTGTAAGCTGCTGTTGAGGTCGACGGTGTCAAAGGAAGAAGAAGACTGCAGAGTTCTGCAGCCTTGTTTTGTTTGACATTCATATAACTGATCTCCTGAATATTGCACTTTTAGAAGTAGTCTGAACCCATAATACATGAATGATATATATTTCATCCACCGCATGAACTTGGGTATATGCTGCCATAGGAAGAAGAAAATAGAAAAGGTTCATATAAATCATTCAGTGGGGGCCTTTTTTTTTTTTTCCTTTAAACCATAATTAGGTTCTTAATAGGTTTTTAAATTTCTGACATGTCATGTTCGATCTACGTGAGTCGATATTTTTTTGCTATGCTTTAATAAGTTTTTTAAAGAGTAAATTGCAAAAAAAAAGCTTCAAGAAGTTGTCATTATGCCATTAATTTTTCAATTGTAAGTTAGATTCCTAAAACTTACAAAAGTTGAGCCATAAAATTGAACTAC

Coding sequence (CDS)

ATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGTACTCGAATTTTCGGCCCATCGCAGAAATATTCGTCCAGAGATATCGCTTCTCATACGACCTTGAAACCCAGAAAGGAAGGACAAGATACCCATGACGAATTGCAGAGGAGGAATCTCAGGGATGAGTTAGAAGATCGTGAGAGGAGGCATTTTTCATCAAAAAACAAGTCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTGGAAAGAGAGATATTGAAGATCGTATTATACCACGAAGTTTAGATGCTGACGATTCTGATGTGGATGTCAAAAGTGATGATGAGAGTGATGATGACGACGACGATGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAAGAAAGAGCAGAGGAAAAGCTTCGGAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCAGAATTACTCCGAGGAAATCCACTGCTTAACGAGCAGCCCTCCTCTTTTAGCGTCAAAAGAAGATGGGATGATGATGTTGTGTTCAAGAATCAGGCTCGTGGCGAATCAAAGACTCCTAAGCGCTTTATAAATGATACAATTAGGAATGACTTCCACAGAAAATTCTTGCAGAAGTACATGAAGTAA

Protein sequence

MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDDESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK*

Homology

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BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot
Match: Q2KJD3 (Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.4e-44
Identity = 115/235 (48.94%), Postives = 163/235 (69.36%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDADD   D + +D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTDEEDED 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN--- 180
           E  +++ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN   
Sbjct: 121 EDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTG 180

Query: 181 -EQP-SSFSVKRRWDDDVVFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK 229
             QP ++F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Sbjct: 181 PSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 231

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BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot
Match: Q0VFP5 (Protein CWC15 homolog OS=Xenopus tropicalis OX=8364 GN=cwc15 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.7e-43
Identity = 116/235 (49.36%), Postives = 159/235 (67.66%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D  +DD
Sbjct: 61  RELEERERVAVREKNRDRPTREHASSV------SKKPRLDQIPAANLDADDPLTDEDADD 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN--- 180
           +SD+D D  DDT ALLAELE+IKKERAEE+ RKE +++ EE +++   +L GNPLLN   
Sbjct: 121 DSDEDSD--DDTAALLAELEKIKKERAEEQARKELEQKAEEERIRMENILSGNPLLNLTG 180

Query: 181 --EQPSSFSVKRRWDDDVVFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK 229
             +  ++F VKRRWDDDVVFKN A+G  E K  KRF+NDT+R++FH+KF++KY+K
Sbjct: 181 PAQSVAAFKVKRRWDDDVVFKNCAKGVDEMKKDKRFVNDTLRSEFHKKFMEKYIK 227

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BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot
Match: Q6NUB2 (Protein CWC15 homolog A OS=Xenopus laevis OX=8355 GN=cwc15-a PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 117/236 (49.58%), Postives = 158/236 (66.95%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D   D+
Sbjct: 61  RELEERERVVARDKNRDRPTREHTSSV------SKKPRLDQIPAANLDADDPLTDEDGDE 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN--- 180
           +SD+D D  DDT ALLAELE+IKKERAEEK RKE +++ EE +++   +L GNPLLN   
Sbjct: 121 DSDEDSD--DDTAALLAELEKIKKERAEEKDRKELEQKAEEERIRMENILSGNPLLNLTG 180

Query: 181 ---EQPSSFSVKRRWDDDVVFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK 229
              +  +SF VKRRWDDDVVFKN A+G  E K  KRF+NDT+R++FH+KF++KY+K
Sbjct: 181 PAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKQKRFVNDTLRSEFHKKFMEKYIK 228

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BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot
Match: Q6DKE6 (Protein CWC15 homolog B OS=Xenopus laevis OX=8355 GN=cwc15-b PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 114/238 (47.90%), Postives = 161/238 (67.65%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G + +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
            ELE+RER     KN+    R+H           K+   D+I   +LDADD   D  +D+
Sbjct: 61  RELEERERVAVRDKNRDRPTREHTSSV------SKKPRLDQIPAANLDADDPLTDEDADE 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN--- 180
           +SD+D D  DDT ALLAELE+IKKERAEE++RKE +++ EE +++   +L GNPLLN   
Sbjct: 121 DSDEDSD--DDTAALLAELEKIKKERAEEQVRKELEQKAEEERIRMENILSGNPLLNLTG 180

Query: 181 ---EQPSSFSVKRRWDDDVVFKNQARG----ESKTPKRFINDTIRNDFHRKFLQKYMK 229
              +  +SF VKRRWDDDVVFKN A+G    + +  KRF+NDT+R++FH+KF++KY+K
Sbjct: 181 PAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKRQDKRFVNDTLRSEFHKKFMEKYVK 230

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BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot
Match: Q9P013 (Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 115/235 (48.94%), Postives = 162/235 (68.94%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPT+ PA+GG  +G   +   S++YSSRD+ SHT +K R+  QD  +E++ R+ R
Sbjct: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
            ELE+RER     KN+    R+H   S +     K+   D+I   +LDADD   D   +D
Sbjct: 61  RELEERERAAAREKNRDRPTREHTTSSSV----SKKPRLDQIPAANLDADDPLTD--EED 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN--- 180
           E  +++ D+DDT ALLAELE+IKKERAEE+ RKE++++ EE +++   +L GNPLLN   
Sbjct: 121 EDFEEESDDDDTAALLAELEKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTG 180

Query: 181 -EQP-SSFSVKRRWDDDVVFKNQARG--ESKTPKRFINDTIRNDFHRKFLQKYMK 229
             QP ++F VKRRWDDDVVFKN A+G  + K  KRF+NDT+R++FH+KF++KY+K
Sbjct: 181 PSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229

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BLAST of CsGy3G004350 vs. NCBI nr
Match: XP_004149567.1 (protein CWC15 homolog [Cucumis sativus] >KGN56042.1 hypothetical protein Csa_009782 [Cucumis sativus])

HSP 1 Score: 424 bits (1089), Expect = 5.75e-149
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP 180
           ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP
Sbjct: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP 180

Query: 181 SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Sbjct: 181 SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228

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BLAST of CsGy3G004350 vs. NCBI nr
Match: XP_038905802.1 (protein CWC15 homolog [Benincasa hispida])

HSP 1 Score: 419 bits (1077), Expect = 4.02e-147
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESDDDDDD-EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180
           ESDDDDDD EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ
Sbjct: 121 ESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180

Query: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Sbjct: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 229

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BLAST of CsGy3G004350 vs. NCBI nr
Match: XP_008449060.1 (PREDICTED: protein CWC15 homolog [Cucumis melo])

HSP 1 Score: 417 bits (1072), Expect = 2.33e-146
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKSKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESDDDDDD-EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180
           ESDDDDDD EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ
Sbjct: 121 ESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180

Query: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Sbjct: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 229

[Close]

BLAST of CsGy3G004350 vs. NCBI nr
Match: TYK13779.1 (protein CWC15-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 413 bits (1062), Expect = 1.33e-144
Identity = 228/244 (93.44%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ES----------------DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV 180
           ES                DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV
Sbjct: 121 ESLFLGLVLKYIMFYGSDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV 180

Query: 181 KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ 228
           KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ
Sbjct: 181 KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ 240

[Close]

BLAST of CsGy3G004350 vs. NCBI nr
Match: XP_022950134.1 (protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CWC15 homolog isoform X2 [Cucurbita maxima] >XP_023540513.1 protein CWC15 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1060), Expect = 1.63e-144
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD+
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESDDD--DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180
           ESDDD  DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 QPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           QP+SFSVKRRWDDDVVFKNQARGE+KTPKRFINDTIRNDFHRKFL KYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL
Match: A0A0A0L647 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G055970 PE=3 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 2.78e-149
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP 180
           ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP
Sbjct: 121 ESDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQP 180

Query: 181 SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Sbjct: 181 SSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228

[Close]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL
Match: A0A1S3BL67 (protein CWC15 homolog OS=Cucumis melo OX=3656 GN=LOC103491040 PE=3 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 1.13e-146
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSK+KSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKSKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ESDDDDDD-EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180
           ESDDDDDD EDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ
Sbjct: 121 ESDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQ 180

Query: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK
Sbjct: 181 PSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 229

[Close]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL
Match: A0A5D3CUA0 (Protein CWC15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00410 PE=3 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 6.45e-145
Identity = 228/244 (93.44%), Postives = 228/244 (93.44%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120

Query: 121 ES----------------DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV 180
           ES                DDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV
Sbjct: 121 ESLFLGLVLKYIMFYGSDDDDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKV 180

Query: 181 KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ 228
           KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ
Sbjct: 181 KEAELLRGNPLLNEQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQ 240

[Close]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL
Match: A0A6J1KV80 (protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 7.88e-145
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD+
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESDDD--DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180
           ESDDD  DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 QPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           QP+SFSVKRRWDDDVVFKNQARGE+KTPKRFINDTIRNDFHRKFL KYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL
Match: A0A6J1GEX7 (protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 7.88e-145
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60

Query: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDD 120
           DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD+
Sbjct: 61  DELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDN 120

Query: 121 ESDDD--DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180
           ESDDD  DDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE
Sbjct: 121 ESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNE 180

Query: 181 QPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 228
           QP+SFSVKRRWDDDVVFKNQARGE+KTPKRFINDTIRNDFHRKFL KYMK
Sbjct: 181 QPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYMK 230

[Close]

BLAST of CsGy3G004350 vs. TAIR 10
Match: AT3G13200.1 (Cwf15 / Cwc15 cell cycle control family protein )

HSP 1 Score: 341.7 bits (875), Expect = 4.7e-94
Identity = 188/231 (81.39%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKEGQDTHDELQRRNLR 60
           MTTAARPTWAPAKGGNEQGG RIFGPSQKYSSRD+A+HTTLKPR+EGQ T +ELQ+ NLR
Sbjct: 1   MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLR 60

Query: 61  DELEDRERRHFSSKNKSY-DDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSD 120
           DELE+RERRHFSSK+KSY DDRD R+GSQLLLE  KRD E+RIIPRS+DADDSDVD+KSD
Sbjct: 61  DELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEERIIPRSVDADDSDVDIKSD 120

Query: 121 DESDD--DDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLN 180
           D+SDD  DDDDEDDTEAL+AEL+QIKKER EE+LRKE++++ EEL  KE ELL+GNPLLN
Sbjct: 121 DDSDDESDDDDEDDTEALMAELDQIKKERVEERLRKEKEQQMEELNAKEEELLKGNPLLN 180

Query: 181 EQPSSFSVKRRWDDDVVFKNQARGESKTPKRFINDTIRNDFHRKFLQKYMK 229
             P+SFSVKRRWDDDVVFKNQARGE K PKRFINDTIRNDFHRKFL +YMK
Sbjct: 181 -TPTSFSVKRRWDDDVVFKNQARGEMKAPKRFINDTIRNDFHRKFLHRYMK 230

The following BLAST results are available for this feature:

BLAST of CsGy3G004350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KJD3	7.4e-44	48.94	Spliceosome-associated protein CWC15 homolog OS=Bos taurus OX=9913 GN=CWC15 PE=2...	[more]
Q0VFP5	3.7e-43	49.36	Protein CWC15 homolog OS=Xenopus tropicalis OX=8364 GN=cwc15 PE=2 SV=1	[more]
Q6NUB2	1.4e-42	49.58	Protein CWC15 homolog A OS=Xenopus laevis OX=8355 GN=cwc15-a PE=2 SV=1	[more]
Q6DKE6	1.8e-42	47.90	Protein CWC15 homolog B OS=Xenopus laevis OX=8355 GN=cwc15-b PE=2 SV=1	[more]
Q9P013	2.4e-42	48.94	Spliceosome-associated protein CWC15 homolog OS=Homo sapiens OX=9606 GN=CWC15 PE...	[more]

BLAST of CsGy3G004350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149567.1	5.75e-149	100.00	protein CWC15 homolog [Cucumis sativus] >KGN56042.1 hypothetical protein Csa_009...	[more]
XP_038905802.1	4.02e-147	99.56	protein CWC15 homolog [Benincasa hispida]	[more]
XP_008449060.1	2.33e-146	99.13	PREDICTED: protein CWC15 homolog [Cucumis melo]	[more]
TYK13779.1	1.33e-144	93.44	protein CWC15-like protein [Cucumis melo var. makuwa]	[more]
XP_022950134.1	1.63e-144	97.39	protein CWC15 homolog isoform X2 [Cucurbita moschata] >XP_023005526.1 protein CW...	[more]

BLAST of CsGy3G004350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L647	2.78e-149	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G055970 PE=3 SV=1	[more]
A0A1S3BL67	1.13e-146	99.13	protein CWC15 homolog OS=Cucumis melo OX=3656 GN=LOC103491040 PE=3 SV=1	[more]
A0A5D3CUA0	6.45e-145	93.44	Protein CWC15-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1KV80	7.88e-145	97.39	protein CWC15 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498489 PE=...	[more]
A0A6J1GEX7	7.88e-145	97.39	protein CWC15 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453305 P...	[more]

BLAST of CsGy3G004350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13200.1	4.7e-94	81.39	Cwf15 / Cwc15 cell cycle control family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..132
None	No IPR available	PANTHER	PTHR12718:SF6	SUBFAMILY NOT NAMED	coord: 1..228
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PFAM	PF04889	Cwf_Cwc_15	coord: 1..228 e-value: 9.4E-78 score: 261.4
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PANTHER	PTHR12718	CELL CYCLE CONTROL PROTEIN CWF15	coord: 1..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G004350.2	CsGy3G004350.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003723	RNA binding