CsGy3G004310 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G004310
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Nuclear transcription factor Y subunit B-9
Location	Gy14Chr3: 3481972 .. 3485538 (+)
RNA-Seq Expression	CsGy3G004310
Synteny	CsGy3G004310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCTTTTTAATGTATAGATATGGAAGTATAGGAATTGAAGAGAGACTTGAGGTGGGTATGGTTTTTTTTTTTTTTTTATAATACAAATCTTTTTATTTCTCCCTTGCTTTCTATATATATATAATAAATACCTATTCATTTGTAATTATTCATTGGGTTCATCTTCACTTTTTAACCTATAAAAATTTATTATGTGTGTTGTTATGAGAAAGTCTAAAAAAATGGGATTGGAAAAAAGTAAAATGTTTACTTATGTAGATCATATGAAATGCAATACTAAAAGGAAACGAAAGATTGATATGCAAAAGGGGTGTCTATCACTCAAAATGAATTATTTGATATGTCTAATTAAGAGTTTGATTTTAGTTTATTTAATTAAAAGTAATAAGATTTATTTTGATTTTCTCTTTTCCTCCCATGCATTCTTTAATTAAACCAATCTTCTCTTATTTAGATAAATAAATAAATAAAAACATTTTAAAACCATTGGTGGTTTCTTTGCTTTGTAACTCTAAAATCTAATAGTTTTTTCTATGGACAAAAAACGGCTCTAAGGAAATTTGGTAGAATTAAGATAGAAAATATTTCTATGTATGAACATTTATTGAAGTTAAGATCGAAGAGATTGAGATCCTTCTCAAAAGGTGTGGGTATTTCATTTTTTTTTTCATCTTTTATAAAACAAATCTCTTTTTTTTCTCCCAATTATTGCTTTCTTATTTTCTATTTATGAAACAAAAAAACCCTACAATTATATAAATATATGAAATTTGAATACAAACAAAATAAATTAGTCTAATATATTGCTATCAAATTCTTCTCAGCCATTTTTTTTCTCTTTTCCTTTTTTTTTTCTCTAAATTTTTATAATTTAGGATGATTTTTCTGATGCAATTCTCAAAATTCCCTTTACTATTTTTTTTATAAAGAAATTAATTAGGAGATAAAGTGGTTGTGATTTGAAATTAAGTTGTTAAAAGAAATTAATATTTTTCTGATGCTATCTCATCCTCTCATGCAATGTTTCTCTTTTCCTCTTTTATTCTCTAATTTCTCTTCCATTATGTTTTTCTTTTCTCTCGTTCTTTATAATTTTTGATGATTTTTCTAAGGTATAAAACACAATTTACCTTTTCTTTTTCCTTTTTCTTTTTTATATATATTTTTTATAAAGAAATTACTTAGAAGATAAAGTGGTTGTGATTTGAAAATTAAGTTGTCAAGGAATTGTGTTTATGTTTTCAATTAAGTAAGTAAATTAAAGTTTAAACAAAGTTGTTCCATTTAGTTACATTTTAGTAGTTAGGATATTGATTTTATAAAGATATATACATATGAAGTAAAACACAATAGACAAATTGGATTACAATAGTTAACTCTCTTTCTTCTATTGTATACAGGAATTGAAAGAGAGACTTAAAAGGGTGGGTGGATTTCTTTTTGTTGAAAACAAATCTCTTTATTTCTTTCTTATTAAATGAAGAAAGAAAATGTGATTGGAGAAAAGTAAAATGTTTACACATGTAGATCATGTAGAATGCAATACTAAAAAGAGGAAACAAGTGGTTGATATGCAAAAGGTGTTTCTGTCAATTAATTAAAGTGAATCAGAGCTCACTGCATCTCTATAATTAGTTTTTGACATGTGTAATTAACTGTTTGTTTTTAATTTGTTTAATTAGAAATATATACAAAAGTCAAAATAAGTTTCTCTTATATATATATATAATTTCATGGAAATATAAAATTGCAATTGAAAAGGTTGGATTACATTTTCTATCTTCTTTGTCCAACATCGTCTACCATTGCTGCTTTTCTTTGCTTTGTAACTCTTAATTCTCCTAGTTTTTTCTATTGGCCAAAAAGAGCACTAAGGAAATTAGAATTAAGATTGAAAACATTTTGTTTGATCATACATATCCACATATGTTCTCTCATTCTTCTTCTTCTCTTTTATGATCATTTACATCAGATTTCTTTTCACTTTCTCTTTTCCCTCCTTCATTCTTTAAAACCAATCTTTTCTAATCGACAATTTTAGGATTACAATTCCTATCTTCTTCTTTCTTGAATATCTTTACTTGATTGGTTTCTTTCCTGTGTAACTATCTAAATTGTAGGTTTTTTTTTTGTTGACAAAAAGGGTTCCATGGAAATTAAATTTGTTGAATTAATTTCTATTTATAGACATTTTAGTTGAGATTGAAAAGATGAGATAGCTATAATTTTACTTTTCTTTTTTCTTTATGAAACAAATAATCTCTTAATTTTGAATACAAACAATCTCAATTATGTTATTAAGGAAATTGTATTGTTCACAATACCTTGTTATGACTCATGAAAGAAGATTTTAGGAGTGAAGAAAAGTAAAATGTTTACACATGTAAACCATGTAAAATACTGAGTCTTTTTCTTTCTTTAAAGTGAAAGTGTGTCAGAACTATAATTAAATATCTTACTTTTTTTATTTAATTTAAAATTCAAAATTCAAATAGTCTAATATATTGCTGTCAAATTCTTCACACCATTTTTTTCTCTTTTCCTTTTTTTTCTCACTAATCCTTTATAATTTAGGATGATTTTTTAATGTAGAGAGTATCAATTCTCAAAATTTTCTTTAATATTTTTTTATAAAGAAATTAATTAGGATATAAAGTGGCTGTGATTTGAAAATTAAGTTGTTAAGAAATTGTGTTTATAATTTCAATTAGTGAAGTAAATTAAAGTTTAAACAAACTAGTTCTATTTCCTTTCATTTGAGTAGTTAGCATTTTGATTTCATAATATATATAGACTGTATGTTGATGAAAAGGGGCAATCAAATTTTTTGTATGTATAGACATGAAGGAAGGAAATGAATATGGATATTTTTATGTATATGTTATCTTGATGAATCTGAATTTGAAGTACTTGTGTCGTTATTCAGGACTGAACACGATGCTGACCCCAAACAACCCAACCTCCATCAACAGCAATCCAAACACCAATCAGCATCTCTCGAACGGAGGAACCTCCATTGGCAACTCCTCAGCTACCAGCCCCCTCTCGGTCGCCGCCACTGCCAACAATAATGAGCAAAACCAACAATGCATGGTGCGAGAACAAGACCAATACATGCCGATGGCTAATGTGATACGAATCATGAAGCGGATTTTACCCTCTCATGCAAAAATATCCGACGACACCAAAGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGCTTCATCACTAGCGAGGCGAACGAACGATGCCACCGGGAGCAACGCAAGACGGTGACTGCAGAGGATGTTCTTTGGGCTATGGGGAAGTTAGGTTTTGACAACTACATAGAACCGCTAACTGTTTTCCTTAACCGCTATCGTGAGTCGGAGAGTATTCGTACTGAACCAATGTTGAGGCGCAATGTGGATTATGGGGCACAAGTGGGGATGATATCACCGTATGGGCAGGCGTTTCAGATAGGGCAAGTCCCTGCAGGGATGTTTGATGCAATGGGTGGATACTATGGTGGAGGAGGGAGCGGTGGGCCGAGCGCAGGGAACAACAGCCAGCTTTGA

mRNA sequence

ATGAAATTCTTTTTAATGTATAGATATGGAAGTATAGGAATTGAAGAGAGACTTGAGGTGGGACTGAACACGATGCTGACCCCAAACAACCCAACCTCCATCAACAGCAATCCAAACACCAATCAGCATCTCTCGAACGGAGGAACCTCCATTGGCAACTCCTCAGCTACCAGCCCCCTCTCGGTCGCCGCCACTGCCAACAATAATGAGCAAAACCAACAATGCATGGTGCGAGAACAAGACCAATACATGCCGATGGCTAATGTGATACGAATCATGAAGCGGATTTTACCCTCTCATGCAAAAATATCCGACGACACCAAAGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGCTTCATCACTAGCGAGGCGAACGAACGATGCCACCGGGAGCAACGCAAGACGGTGACTGCAGAGGATGTTCTTTGGGCTATGGGGAAGTTAGGTTTTGACAACTACATAGAACCGCTAACTGTTTTCCTTAACCGCTATCGTGAGTCGGAGAGTATTCGTACTGAACCAATGTTGAGGCGCAATGTGGATTATGGGGCACAAGTGGGGATGATATCACCGTATGGGCAGGCGTTTCAGATAGGGCAAGTCCCTGCAGGGATGTTTGATGCAATGGGTGGATACTATGGTGGAGGAGGGAGCGGTGGGCCGAGCGCAGGGAACAACAGCCAGCTTTGA

Coding sequence (CDS)

ATGAAATTCTTTTTAATGTATAGATATGGAAGTATAGGAATTGAAGAGAGACTTGAGGTGGGACTGAACACGATGCTGACCCCAAACAACCCAACCTCCATCAACAGCAATCCAAACACCAATCAGCATCTCTCGAACGGAGGAACCTCCATTGGCAACTCCTCAGCTACCAGCCCCCTCTCGGTCGCCGCCACTGCCAACAATAATGAGCAAAACCAACAATGCATGGTGCGAGAACAAGACCAATACATGCCGATGGCTAATGTGATACGAATCATGAAGCGGATTTTACCCTCTCATGCAAAAATATCCGACGACACCAAAGAGACCATCCAAGAATGTGTGTCGGAGTACATTAGCTTCATCACTAGCGAGGCGAACGAACGATGCCACCGGGAGCAACGCAAGACGGTGACTGCAGAGGATGTTCTTTGGGCTATGGGGAAGTTAGGTTTTGACAACTACATAGAACCGCTAACTGTTTTCCTTAACCGCTATCGTGAGTCGGAGAGTATTCGTACTGAACCAATGTTGAGGCGCAATGTGGATTATGGGGCACAAGTGGGGATGATATCACCGTATGGGCAGGCGTTTCAGATAGGGCAAGTCCCTGCAGGGATGTTTGATGCAATGGGTGGATACTATGGTGGAGGAGGGAGCGGTGGGCCGAGCGCAGGGAACAACAGCCAGCTTTGA

Protein sequence

MKFFLMYRYGSIGIEERLEVGLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL*

Homology

[Close]

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot
Match: Q9SFD8 (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NFYB9 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-44
Identity = 112/206 (54.37%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 31  PTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNN-----EQNQQCMVREQDQYMP 90
           P SI S  N +QH +N       +  TS + VA   + N     +Q   C+ REQDQYMP
Sbjct: 13  PKSI-SELNLDQHSNN------PTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 72

Query: 91  MANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVLW 150
           +ANVIRIM++ LPSHAKISDD KETIQECVSEYISF+T EANERC REQRKT+TAED+LW
Sbjct: 73  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 132

Query: 151 AMGKLGFDNYIEPLTVFLNRYRESE-----SIRTEPMLRRNVDYGAQVGMISPYGQAFQI 210
           AM KLGFDNY++PLTVF+NRYRE E     ++R EP   R    G  +G   P       
Sbjct: 133 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 192

Query: 211 GQVPAGMFD---AMGG--YYGGGGSG 222
           G    GM D    MGG  YY  G SG
Sbjct: 193 GPYGYGMLDQSMVMGGGRYYQNGSSG 211

[Close]

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot
Match: Q84W66 (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 65  TANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITS 124
           T+N  E  ++C VREQD++MP+ANVIRIM+RILP+HAKISDD+KETIQECVSEYISFIT 
Sbjct: 46  TSNGGE--EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITG 105

Query: 125 EANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIR 174
           EANERC REQRKT+TAEDVLWAM KLGFD+YIEPLT++L+RYRE E  R
Sbjct: 106 EANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 67  NNNEQNQQCMV--REQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITS 126
           N N QN Q  +  REQD+++P+ANV RIMK+ LP++AKIS D KET+QECVSE+ISF+T 
Sbjct: 13  NGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTG 72

Query: 127 EANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDY 186
           EA+++C +E+RKT+  +D+LWAM  LGF++Y+EPL V+L R+RE E  RT          
Sbjct: 73  EASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERT---------- 132

Query: 187 GAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGG 220
               G+  P     ++G+         GG+YGGGG
Sbjct: 133 ----GLGRPQ-TGGEVGEHQRDAVGDGGGFYGGGG 152

[Close]

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-31
Identity = 60/97 (61.86%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 78  REQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKT 137
           REQD+++P+ANV RIMK+ LP++AKIS D KET+QECVSE+ISFIT EA+++C RE+RKT
Sbjct: 20  REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79

Query: 138 VTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRT 175
           +  +D+LWAM  LGF++Y+EPL V+L +YRE E  +T
Sbjct: 80  INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKT 116

[Close]

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 9.5e-31
Identity = 58/94 (61.70%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 77  VREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRK 136
           VREQD+++P+AN+ RIMK+ +P++ KI+ D KET+QECVSE+ISFITSEA+++C RE+RK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 137 TVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESE 171
           T+  +D+LWAM  LGF++YIEPL V+L +YRE E
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREME 129

[Close]

BLAST of CsGy3G004310 vs. NCBI nr
Match: KAE8650108.1 (hypothetical protein Csa_010418 [Cucumis sativus])

HSP 1 Score: 451 bits (1159), Expect = 1.54e-159
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MKFFLMYRYGSIGIEERLEVGLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPL 60
           MKFFLMYRYGSIGIEERLEVGLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPL
Sbjct: 1   MKFFLMYRYGSIGIEERLEVGLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPL 60

Query: 61  SVAATANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS 120
           SVAATANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS
Sbjct: 61  SVAATANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS 120

Query: 121 FITSEANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRR 180
           FITSEANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRR
Sbjct: 121 FITSEANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRR 180

Query: 181 NVDYGAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           NVDYGAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL
Sbjct: 181 NVDYGAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231

[Close]

BLAST of CsGy3G004310 vs. NCBI nr
Match: XP_031738747.1 (nuclear transcription factor Y subunit B-9-like [Cucumis sativus])

HSP 1 Score: 412 bits (1058), Expect = 5.12e-144
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 21  GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQ 80
           GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQ
Sbjct: 29  GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQ 88

Query: 81  DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTA 140
           DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTA
Sbjct: 89  DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTA 148

Query: 141 EDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI 200
           EDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI
Sbjct: 149 EDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI 208

Query: 201 GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL
Sbjct: 209 GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 239

[Close]

BLAST of CsGy3G004310 vs. NCBI nr
Match: KAE8650109.1 (hypothetical protein Csa_010950 [Cucumis sativus])

HSP 1 Score: 383 bits (983), Expect = 7.74e-133
Identity = 203/233 (87.12%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MKFFLMYRYGSIGIEERLEVGLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPL 60
           M+ F MYR+           GLN MLTPNNPTSIN+NPNTN HLS+GGTSIGNSSATSPL
Sbjct: 1   MRNFPMYRHQ----------GLNMMLTPNNPTSINNNPNTNHHLSDGGTSIGNSSATSPL 60

Query: 61  SVAATANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS 120
           SVAATA+NN+QNQQC+VREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS
Sbjct: 61  SVAATASNNQQNQQCLVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYIS 120

Query: 121 FITSEANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPML 180
           FITSEANERC REQRKTVTAEDVLWAMGKLGFD+YIEPLTVFLNRYRESES  IRTEPM 
Sbjct: 121 FITSEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPMW 180

Query: 181 RRNVDYGAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           RRNVDYG QVGMISPYGQ FQIG VPAGMFDAMGGYYGGGGSGGPSAGNNSQL
Sbjct: 181 RRNVDYGPQVGMISPYGQGFQIGHVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 223

[Close]

BLAST of CsGy3G004310 vs. NCBI nr
Match: XP_031738739.1 (nuclear transcription factor Y subunit B-9-like [Cucumis sativus] >KAE8650107.1 hypothetical protein Csa_009663 [Cucumis sativus])

HSP 1 Score: 376 bits (965), Expect = 2.69e-130
Identity = 196/209 (93.78%), Postives = 200/209 (95.69%), Query Frame = 0


Query: 25  MLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQDQYM 84
           MLTPNN TSIN+NPNTN HLS+GGTSIGNSSATSPLSVAATANNNEQNQQC+VREQDQYM
Sbjct: 2   MLTPNNQTSINNNPNTNHHLSDGGTSIGNSSATSPLSVAATANNNEQNQQCLVREQDQYM 61

Query: 85  PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVL 144
           PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERC REQRKTVTAEDVL
Sbjct: 62  PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCQREQRKTVTAEDVL 121

Query: 145 WAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPMLRRNVDYGAQVGMISPYGQAFQIGQ 204
           WAMGKLGFD+YIEPLTVFLNRYRESES  IRTEPMLRRNVDYG QVGMISPYGQ FQIG 
Sbjct: 122 WAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPMLRRNVDYGPQVGMISPYGQGFQIGH 181

Query: 205 VPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           VPA MFDAMGGYYGGGGSGGPSAGNNSQL
Sbjct: 182 VPAVMFDAMGGYYGGGGSGGPSAGNNSQL 210

[Close]

BLAST of CsGy3G004310 vs. NCBI nr
Match: KAE8650106.1 (hypothetical protein Csa_009480 [Cucumis sativus])

HSP 1 Score: 373 bits (958), Expect = 9.11e-129
Identity = 193/213 (90.61%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 21  GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQ 80
           GLN MLTPN PTSIN+ PNTN HLSNGGT+ GNSSATSPLSVAATANNNEQNQQC+VREQ
Sbjct: 28  GLNMMLTPNKPTSINNTPNTNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQ 87

Query: 81  DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTA 140
           DQYMP+ANVIRIM+RILPSHAKISDD KETIQECVSEYISFIT EANERC REQRKTVTA
Sbjct: 88  DQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTA 147

Query: 141 EDVLWAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPMLRRNVDYGAQVGMISPYGQAF 200
           EDVLWAMGKLGFD+YIEPLTVFLNRYRESES  IRTEP+LRRNVDYG QVGMISPYGQAF
Sbjct: 148 EDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAF 207

Query: 201 QIGQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           QIG VPAGMFDAMGGYYGGGGSGGPSAGN SQL
Sbjct: 208 QIGHVPAGMFDAMGGYYGGGGSGGPSAGNGSQL 240

[Close]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL
Match: A0A0A0L2U1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G049440 PE=3 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 6.79e-142
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 21  GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQ 80
           GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQC+VREQ
Sbjct: 29  GLNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCLVREQ 88

Query: 81  DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTA 140
           DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERC REQRKTVTA
Sbjct: 89  DQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCQREQRKTVTA 148

Query: 141 EDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI 200
           EDVLWAMGKLGFD+YIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI
Sbjct: 149 EDVLWAMGKLGFDDYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQI 208

Query: 201 GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL
Sbjct: 209 GQVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 239

[Close]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL
Match: A0A5D3CPF3 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00390 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 5.66e-125
Identity = 187/209 (89.47%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 25  MLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQDQYM 84
           M+TPN  TSINS PN+N HLSNGGT+ GNSSATSPLSVAATANNNEQNQQC+VREQDQYM
Sbjct: 2   MVTPNKATSINSTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQYM 61

Query: 85  PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVL 144
           P+ANVIRIM+RILPSHAKISDD KETIQECVSEYISFIT EANERC REQRKTVTAEDVL
Sbjct: 62  PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL 121

Query: 145 WAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPMLRRNVDYGAQVGMISPYGQAFQIGQ 204
           WAMGKLGFD+YIEPLTVFLNRYRESES  IRTEP+LRRNVDYG QVGMISPYGQAFQIG 
Sbjct: 122 WAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIGH 181

Query: 205 VPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           VPAGMFDAMGGYYGGGG GGPSAGN SQL
Sbjct: 182 VPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL
Match: A0A1S3BKV5 (nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC103491142 PE=3 SV=1)

HSP 1 Score: 360 bits (925), Expect = 1.62e-124
Identity = 186/209 (89.00%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 25  MLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQDQYM 84
           M+TPN  TSIN+ PN+N HLSNGGT+ GNSSATSPLSVAATANNNEQNQQC+VREQDQYM
Sbjct: 2   MVTPNKATSINNTPNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQYM 61

Query: 85  PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVL 144
           P+ANVIRIM+RILPSHAKISDD KETIQECVSEYISFIT EANERC REQRKTVTAEDVL
Sbjct: 62  PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL 121

Query: 145 WAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPMLRRNVDYGAQVGMISPYGQAFQIGQ 204
           WAMGKLGFD+YIEPLTVFLNRYRESES  IRTEP+LRRNVDYG QVGMISPYGQAFQIG 
Sbjct: 122 WAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIGH 181

Query: 205 VPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           VPAGMFDAMGGYYGGGG GGPSAGN SQL
Sbjct: 182 VPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL
Match: A0A5A7VC19 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00440 PE=3 SV=1)

HSP 1 Score: 358 bits (918), Expect = 1.89e-123
Identity = 186/209 (89.00%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 25  MLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQDQYM 84
           M+TPN  TSINS  N+N HLSNGGT+ GNSSATSPLSVAATANNNEQNQQC+VREQDQYM
Sbjct: 2   MVTPNKATSINSTLNSNHHLSNGGTATGNSSATSPLSVAATANNNEQNQQCVVREQDQYM 61

Query: 85  PMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVL 144
           P+ANVIRIM+RILPSHAKISDD KETIQECVSEYISFIT EANERC REQRKTVTAEDVL
Sbjct: 62  PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL 121

Query: 145 WAMGKLGFDNYIEPLTVFLNRYRESES--IRTEPMLRRNVDYGAQVGMISPYGQAFQIGQ 204
           WAMGKLGFD+YIEPLTVFLNRYRESES  IRTEP+LRRNVDYG QVGMISPYGQAFQIG 
Sbjct: 122 WAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQIGH 181

Query: 205 VPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
           VPAGMFDAMGGYYGGGG GGPSAGN SQL
Sbjct: 182 VPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL
Match: A0A0A0L4W1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G055940 PE=3 SV=1)

HSP 1 Score: 317 bits (812), Expect = 3.83e-107
Identity = 170/210 (80.95%), Postives = 173/210 (82.38%), Query Frame = 0


Query: 22  LNTMLTPNNPTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNNEQNQQCMVREQD 81
           LN MLTPNNP SIN+NPNTN HLS+GGTSIGNSSATSPLSVAATANNNEQNQQC+VREQD
Sbjct: 41  LNMMLTPNNPNSINNNPNTNHHLSDGGTSIGNSSATSPLSVAATANNNEQNQQCLVREQD 100

Query: 82  QYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAE 141
           QYMPMAN                             YISFITSEANERC REQRKTVTAE
Sbjct: 101 QYMPMAN-----------------------------YISFITSEANERCQREQRKTVTAE 160

Query: 142 DVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGAQVGMISPYGQAFQIG 201
           DVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYG QVGMISPYGQAFQIG
Sbjct: 161 DVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDYGPQVGMISPYGQAFQIG 220

Query: 202 QVPAGMFDAMGGYYGGGGSGGPSAGNNSQL 231
            VPAGMFDAMGGYYGGGGS GPS GNNSQL
Sbjct: 221 HVPAGMFDAMGGYYGGGGSCGPSTGNNSQL 221

[Close]

BLAST of CsGy3G004310 vs. TAIR 10
Match: AT1G21970.1 (Histone superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 8.2e-46
Identity = 112/206 (54.37%), Postives = 131/206 (63.59%), Query Frame = 0


Query: 31  PTSINSNPNTNQHLSNGGTSIGNSSATSPLSVAATANNN-----EQNQQCMVREQDQYMP 90
           P SI S  N +QH +N       +  TS + VA   + N     +Q   C+ REQDQYMP
Sbjct: 13  PKSI-SELNLDQHSNN------PTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMP 72

Query: 91  MANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKTVTAEDVLW 150
           +ANVIRIM++ LPSHAKISDD KETIQECVSEYISF+T EANERC REQRKT+TAED+LW
Sbjct: 73  IANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILW 132

Query: 151 AMGKLGFDNYIEPLTVFLNRYRESE-----SIRTEPMLRRNVDYGAQVGMISPYGQAFQI 210
           AM KLGFDNY++PLTVF+NRYRE E     ++R EP   R    G  +G   P       
Sbjct: 133 AMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP 192

Query: 211 GQVPAGMFD---AMGG--YYGGGGSG 222
           G    GM D    MGG  YY  G SG
Sbjct: 193 GPYGYGMLDQSMVMGGGRYYQNGSSG 211

[Close]

BLAST of CsGy3G004310 vs. TAIR 10
Match: AT5G47670.1 (nuclear factor Y, subunit B6 )

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-43
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 65  TANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITS 124
           T+N  E  ++C VREQD++MP+ANVIRIM+RILP+HAKISDD+KETIQECVSEYISFIT 
Sbjct: 46  TSNGGE--EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITG 105

Query: 125 EANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIR 174
           EANERC REQRKT+TAEDVLWAM KLGFD+YIEPLT++L+RYRE E  R
Sbjct: 106 EANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of CsGy3G004310 vs. TAIR 10
Match: AT5G47670.2 (nuclear factor Y, subunit B6 )

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-43
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 65  TANNNEQNQQCMVREQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITS 124
           T+N  E  ++C VREQD++MP+ANVIRIM+RILP+HAKISDD+KETIQECVSEYISFIT 
Sbjct: 17  TSNGGE--EECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITG 76

Query: 125 EANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIR 174
           EANERC REQRKT+TAEDVLWAM KLGFD+YIEPLT++L+RYRE E  R
Sbjct: 77  EANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 123

[Close]

BLAST of CsGy3G004310 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 138.3 bits (347), Expect = 8.0e-33
Identity = 74/155 (47.74%), Postives = 103/155 (66.45%), Query Frame = 0


Query: 67  NNNEQNQQCMV--REQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITS 126
           N N QN Q  +  REQD+++P+ANV RIMK+ LP++AKIS D KET+QECVSE+ISF+T 
Sbjct: 13  NGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTG 72

Query: 127 EANERCHREQRKTVTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRTEPMLRRNVDY 186
           EA+++C +E+RKT+  +D+LWAM  LGF++Y+EPL V+L R+RE E  RT          
Sbjct: 73  EASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERT---------- 132

Query: 187 GAQVGMISPYGQAFQIGQVPAGMFDAMGGYYGGGG 220
               G+  P     ++G+         GG+YGGGG
Sbjct: 133 ----GLGRPQ-TGGEVGEHQRDAVGDGGGFYGGGG 152

[Close]

BLAST of CsGy3G004310 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32
Identity = 60/97 (61.86%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 78  REQDQYMPMANVIRIMKRILPSHAKISDDTKETIQECVSEYISFITSEANERCHREQRKT 137
           REQD+++P+ANV RIMK+ LP++AKIS D KET+QECVSE+ISFIT EA+++C RE+RKT
Sbjct: 20  REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79

Query: 138 VTAEDVLWAMGKLGFDNYIEPLTVFLNRYRESESIRT 175
           +  +D+LWAM  LGF++Y+EPL V+L +YRE E  +T
Sbjct: 80  INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKT 116

The following BLAST results are available for this feature:

BLAST of CsGy3G004310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFD8	1.2e-44	54.37	Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84W66	1.8e-42	77.06	Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	1.1e-31	47.74	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O23310	5.6e-31	61.86	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	9.5e-31	61.70	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CsGy3G004310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650108.1	1.54e-159	100.00	hypothetical protein Csa_010418 [Cucumis sativus]	[more]
XP_031738747.1	5.12e-144	100.00	nuclear transcription factor Y subunit B-9-like [Cucumis sativus]	[more]
KAE8650109.1	7.74e-133	87.12	hypothetical protein Csa_010950 [Cucumis sativus]	[more]
XP_031738739.1	2.69e-130	93.78	nuclear transcription factor Y subunit B-9-like [Cucumis sativus] >KAE8650107.1 ...	[more]
KAE8650106.1	9.11e-129	90.61	hypothetical protein Csa_009480 [Cucumis sativus]	[more]

BLAST of CsGy3G004310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2U1	6.79e-142	98.58	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0494...	[more]
A0A5D3CPF3	5.66e-125	89.47	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BKV5	1.62e-124	89.00	nuclear transcription factor Y subunit B-9 OS=Cucumis melo OX=3656 GN=LOC1034911...	[more]
A0A5A7VC19	1.89e-123	89.00	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0L4W1	3.83e-107	80.95	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0559...	[more]

BLAST of CsGy3G004310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21970.1	8.2e-46	54.37	Histone superfamily protein	[more]
AT5G47670.1	1.3e-43	77.06	nuclear factor Y, subunit B6	[more]
AT5G47670.2	1.3e-43	77.06	nuclear factor Y, subunit B6	[more]
AT5G47640.1	8.0e-33	47.74	nuclear factor Y, subunit B2	[more]
AT4G14540.1	4.0e-32	61.86	nuclear factor Y, subunit B3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 149..167 score: 32.06 coord: 130..148 score: 32.3 coord: 111..129 score: 47.73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..59
None	No IPR available	PANTHER	PTHR11064:SF115	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9	coord: 50..196
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 69..183 e-value: 1.3E-40 score: 140.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 80..175
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 84..147 e-value: 2.4E-24 score: 85.4
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 50..196
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 114..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G004310.2	CsGy3G004310.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding