Homology
BLAST of CsGy3G004220 vs. ExPASy Swiss-Prot
Match:
Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)
HSP 1 Score: 726.9 bits (1875), Expect = 2.2e-208
Identity = 369/681 (54.19%), Postives = 484/681 (71.07%), Query Frame = 0
Query: 5 HPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHVRAAD 64
H W L R L C +++ + T+ + ++ ++FPLK+VT+SNFE L++LRS V+AAD
Sbjct: 4 HKRWPL-RSLVCSF-SSSAAETVTTSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAAD 63
Query: 65 FVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKNSFVA 124
FVAIDLEMTG+TSAPWRD LEFDR+DVRYL VKDSAEKFAV+QFG+CPFRWDS SFV+
Sbjct: 64 FVAIDLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVS 123
Query: 125 HPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHEDAARK 184
+PHNFF+FPR E+ D P+ EFLCQTTSM+FLAKYQFDFN CI+EGISYLSR E+ A K
Sbjct: 124 YPHNFFVFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASK 183
Query: 185 RLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEFQGQE 244
RL +G++ +D+S + K V + DVLF RM+ L+EWR LL N +
Sbjct: 184 RLKMLHGEDGIDSSGETEEL---KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPR 243
Query: 245 GSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADLQQLV 304
SN + +T+F MRPAL+L FTSHQ++++ V++KHF DL ++ ND ++ + +V
Sbjct: 244 ISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIV 303
Query: 305 VFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLDMLHI 364
V+ DS DKE LM+E ++K + E KIQSAIGFR VIDLL+SEKKLIVGHNCFLD+ H+
Sbjct: 304 VYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHV 363
Query: 365 HRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGLLCPH 424
+ KF+G LPST E+FV+S+ HFPYI+DTKILLN N +L +RM KS+TSLSSAF LCP
Sbjct: 364 YSKFVGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQ 423
Query: 425 IAFSSQRVSAW-NSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMGIDF 484
I FSS+ ++ V ++V++D++R S WN+G HEAGYDAFMTGC+FAQAC+ +G DF
Sbjct: 424 IEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDF 483
Query: 485 VDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQNIVL 544
S ++ NE L+K+INRLYLSW RGDIIDL TG+ +++ +K ++NIVL
Sbjct: 484 KQHSQLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGHSNADNWRV----SKFKYENIVL 543
Query: 545 IWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKLEKR 604
IW FP L AR IK CI KAFG +V+SV H+D+SAVFV F E+V +FL LK +LE
Sbjct: 544 IWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESS 603
Query: 605 DDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIKSEE 664
D P+SVLHPL+++ + T AA YEAYK+ICSS +S+ +FSDQAE VG+ +T E
Sbjct: 604 DGPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAETVGVKSRTRPNAQCE 663
Query: 665 KRSRMHQAVETTEIQGTEVEA 685
+R V T ++A
Sbjct: 664 TETREENTVTVTHKASDLIDA 675
BLAST of CsGy3G004220 vs. ExPASy Swiss-Prot
Match:
Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 1.0e-59
Identity = 181/630 (28.73%), Postives = 291/630 (46.19%), Query Frame = 0
Query: 10 LQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHVRAADFVAID 69
+QRR I SA T + + +K V KSNF L E+R+ + ++DF+A+
Sbjct: 1 MQRRFLSSI------SATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALS 60
Query: 70 LEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKNSFVAHPHNF 129
L+ TG +A W + D YL K +AE++ +LQF +CPF +K HP+NF
Sbjct: 61 LQNTGSYAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNF 120
Query: 130 FIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHEDAAR-KRLNF 189
+FPR E++ PS F CQ + + +A+ FDFN CIYEGISYLSRA E A++ N
Sbjct: 121 HLFPRDELKCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENP 180
Query: 190 AYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSND 249
D + +SS T + D +F R+++R+ WR + + S+
Sbjct: 181 ILADSVTVSSSPAT---------VADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSL 240
Query: 250 HKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADLQQL-VVFV 309
+ + + R LT+ + Q++LI ++ + +D+ ++V + Q + VF+
Sbjct: 241 RRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFM 300
Query: 310 DSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLDMLHIHRK 369
S++DK+L +E+ +KE N + GFR V+D +SS +K +V N D IH K
Sbjct: 301 SSKEDKDLFKRELKDLEKEEN----RRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAK 360
Query: 370 FIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAF 429
F+G LPS ++F SSL FP ++D + + L N SN L +A L + F
Sbjct: 361 FLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPL---SNISN--LPAAMSSL--NRFF 420
Query: 430 SSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEA-GYDAFMTGCVFAQACDLMGIDFVDR 489
+ V N G V++ + H++ G +A M +FA+ C + +
Sbjct: 421 APVDVEVANQGCPVKLD------------EGHQSHGQNAVMISQLFAKLCT------IQK 480
Query: 490 STSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTT-RKHRAKVSFQNIVLIW 549
S + NE Q S + + + N E+ K+ +VS +N+V IW
Sbjct: 481 SDLSTIQSNEDFQ-----ALASDEHANSVTSCSKNAGDENVKVWSKNSRRVSSENLVFIW 540
Query: 550 GFPTNLTARKIKACISKAFGQ-TNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKLEKRD 609
G +TA K+K + K+ V ++D S+ + F + FL E+ D
Sbjct: 541 GLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLD 572
Query: 610 DPLSVLHPLTELFDVRTTHAAGYEAYKKIC 635
L + AGYE YK+ C
Sbjct: 601 GSLREM-------VAEGLRGAGYETYKRAC 572
BLAST of CsGy3G004220 vs. ExPASy Swiss-Prot
Match:
Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 3.1e-40
Identity = 145/556 (26.08%), Postives = 245/556 (44.06%), Query Frame = 0
Query: 44 VTKSNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRDLLE--FDRFDVRYLNVKDSAE 103
+T+SNF+ L ++ + ADF+AID E +GI+ P L FD + RY +K +
Sbjct: 3 ITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHSM 62
Query: 104 KFAVLQFGICPFRWDSAKNSFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQF 163
+F + QFG+C F +D+ + ++ NF+IFP+ + P +F+CQ++S++FLA F
Sbjct: 63 EFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQGF 122
Query: 164 DFNACIYEGISYLSRAHEDAARKRLNFAYGDEMLDAS-----SNVTNVMDKKRVGIPDVL 223
DFN GI YL++ E R + Y D ++ S ++ K V IPD
Sbjct: 123 DFNKVFRNGIPYLNQEEERVLRDQ----YEDRRSQSNGASTMSYISPNSSKTPVSIPDEQ 182
Query: 224 --FKERMKNRLHEWRDRLLSERNMEFQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQI 283
F +++ R+ ++ N+ K ++ + T +Q
Sbjct: 183 KGFIDKVVERVEDFL----------------KNEQK------------SMNVEPCTGYQR 242
Query: 284 KLIQLVIKKHFEDLCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQS 343
KLI + + + V ++ ++ + + D++E E + KE E +
Sbjct: 243 KLIYQTLNWKYPR--GIHVETVESEKKERYIVISKVDEEERKRMEQQKQAKEREE--LDD 302
Query: 344 AIGFRHVIDLLSSEKKLIVGHNCFLDMLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTK 403
A+GF +I +SS KL+VGHN LD++H +F LP EF FP ++DTK
Sbjct: 303 AVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTK 362
Query: 404 ILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWN 463
++ + N + NTSL+ L F +V + + +S
Sbjct: 363 LMASTNPF---KEIIYNTSLAELEKRL-KEAPFKPPKVDS----------AEGFQSYNTA 422
Query: 464 SGDTHEAGYDAFMTGCVFAQACDLMGIDFVDRSTSENLLGNEILQKHINRLYLSWARGDI 523
S HEAGYDA++TG F + +G F+ ++I++ N+L+L I
Sbjct: 423 SEQLHEAGYDAYITGLCFISMANYLG-SFLSPPKDYVSCRSKIVRPFFNKLFLM----RI 482
Query: 524 IDLSTGNQVTESFTTRKHRAKVSFQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNH 583
+D+ N ++ VL FP + S AFG VS
Sbjct: 483 MDIPYLNLEGPDLQPKRDN--------VLHVTFPKEWKTSDLYQLFS-AFGNIQVS---W 490
Query: 584 LDESAVFVQFTKPEMV 591
+D+++ FV ++PE V
Sbjct: 543 IDDTSAFVSLSQPEQV 490
BLAST of CsGy3G004220 vs. ExPASy Swiss-Prot
Match:
Q7ZU92 (Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2)
HSP 1 Score: 163.7 bits (413), Expect = 7.5e-39
Identity = 150/557 (26.93%), Postives = 241/557 (43.27%), Query Frame = 0
Query: 44 VTKSNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRDLLE--FDRFDVRYLNVKDSAE 103
VT+ NF+ L E+ + V+ ADF++ID E TGI+ P L D + RY ++ +
Sbjct: 3 VTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHSM 62
Query: 104 KFAVLQFGICPFRWDSAKNSFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQF 163
F + QFG+C FR+D +++++ NF+IFP+ P +F+CQ++S++FLA F
Sbjct: 63 NFLLFQFGVCTFRYDQNQSTYITKAFNFYIFPK-PFSRTSPDIKFICQSSSIDFLASQGF 122
Query: 164 DFNACIYEGISYLSRAHEDAARKRLNFAYG--------DEMLDASSNVTNVMDKKRVGIP 223
DFN GI YL++ E R++ G + + V NV + +R I
Sbjct: 123 DFNKVFRSGIPYLNQEEECQLREQYEERRGQMNGAGPVSYTPPSGTGVCNVPEDQREFIR 182
Query: 224 DVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQ 283
V +E+++ L L E FQ K +QT+ K L
Sbjct: 183 SV--EEKVEALLKNTDQTLDLEPCTGFQ-------RKLIYQTLNSKYSKGL--------- 242
Query: 284 IKLIQLVIKKHFEDLCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQ 343
H E L + ++ + + DD+E +E + Q+E E +
Sbjct: 243 ----------HVEAL--------ETEKKERFIQISKVDDEERRRREQQKQQREQEE--LN 302
Query: 344 SAIGFRHVIDLLSSEKKLIVGHNCFLDMLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDT 403
A+GF VI +S KL+VGHN LD++H +F G LP ++F FP ++DT
Sbjct: 303 DAVGFSRVIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDT 362
Query: 404 KILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKW 463
K++ + + NTSL+ L F + L+S
Sbjct: 363 KLMASTQPF---KEIIHNTSLAELHKQL-RQKPFRPPTTEC----------PEGLQSYDT 422
Query: 464 NSGDTHEAGYDAFMTGCVFAQACDLMGIDFVDRSTSENLLGNEILQKHINRLYLSWARGD 523
++ HEAGYDAF+TG F + +G F+ S +++L+ N+L+L
Sbjct: 423 STEQLHEAGYDAFITGLCFISMANYLG-SFLTPPKSHISARSKLLEPFYNKLFLM----R 482
Query: 524 IIDLSTGNQVTESFTTRKHRAKVSFQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVN 583
+ID+ N ++ VL FP + S AFG VS V
Sbjct: 483 VIDIPYLNMSGPDLQPKRDH--------VLYVTFPKEWKTSDLYQLFS-AFGNIQVSWV- 489
Query: 584 HLDESAVFVQFTKPEMV 591
D+++ FV ++ E V
Sbjct: 543 --DDTSAFVSLSQTEQV 489
BLAST of CsGy3G004220 vs. ExPASy Swiss-Prot
Match:
P69341 (Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2)
HSP 1 Score: 160.2 bits (404), Expect = 8.3e-38
Identity = 142/551 (25.77%), Postives = 244/551 (44.28%), Query Frame = 0
Query: 44 VTKSNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRDLLE--FDRFDVRYLNVKDSAE 103
+ +SNF++ L ++ + ADF AID E +GI+ P L FD + RY +K +
Sbjct: 3 IIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHSM 62
Query: 104 KFAVLQFGICPFRWDSAKNSFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQF 163
F + QFG+C F++D + ++ NF++FP+ P +F+CQ++S++FLA F
Sbjct: 63 DFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQGF 122
Query: 164 DFNACIYEGISYLSRAHEDAARKRLNFAYGDEM-LDASSNVTNVMDKKRVGIPDVLFKER 223
DFN GI YL++ E R++ + A S + K V IPD K
Sbjct: 123 DFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALSYTSPNTSKCPVTIPDDQKK-- 182
Query: 224 MKNRLHEWRDRLLSERNMEFQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLI-QL 283
+ D+++ + Q +E N L L T Q KLI Q
Sbjct: 183 -------FIDQVVEKIEDLLQSEENKN----------------LDLEPCTGFQRKLIYQT 242
Query: 284 VIKKHFEDLCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFR 343
+ K+ + + + + ++ VD + K Q+ ++Q+E+N+ A+GF
Sbjct: 243 LSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELND-----AVGFS 302
Query: 344 HVIDLLSSEKKLIVGHNCFLDMLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNG 403
VI +++ KL++GHN LD++H +F LP+ EF FP ++DTK++ +
Sbjct: 303 RVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAST 362
Query: 404 NNILIRRMNKSNTSLSSAFGLLCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTH 463
+ +NTSL+ L F+ +V + + S S H
Sbjct: 363 QPF---KDIINNTSLAELEKRL-KETPFNPPKVES----------AEGFPSYDTASEQLH 422
Query: 464 EAGYDAFMTGCVFAQACDLMGIDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLST 523
EAGYDA++TG F + +G F+ S +++++ N+L+L ++D+
Sbjct: 423 EAGYDAYITGLCFISMANYLG-SFLSPPKSHVSARSKLIEPFFNKLFLM----RVMDIPY 482
Query: 524 GNQVTESFTTRKHRAKVSFQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESA 583
N ++ VL FP + S AFG +S +D+++
Sbjct: 483 LNLEGPDLQPKRDH--------VLHVTFPKEWKTSDLYQLFS-AFGNIQIS---WIDDTS 491
Query: 584 VFVQFTKPEMV 591
FV ++PE V
Sbjct: 543 AFVSLSQPEQV 491
BLAST of CsGy3G004220 vs. NCBI nr
Match:
XP_004148252.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucumis sativus] >KGN56034.1 hypothetical protein Csa_010614 [Cucumis sativus])
HSP 1 Score: 1388 bits (3593), Expect = 0.0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL
Sbjct: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG
Sbjct: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN
Sbjct: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL
Sbjct: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK
Sbjct: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
Query: 661 SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM
Sbjct: 661 SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM 700
BLAST of CsGy3G004220 vs. NCBI nr
Match:
KAA0065746.1 (poly(A)-specific ribonuclease PARN [Cucumis melo var. makuwa] >TYK13770.1 poly(A)-specific ribonuclease PARN [Cucumis melo var. makuwa])
HSP 1 Score: 1256 bits (3251), Expect = 0.0
Identity = 639/704 (90.77%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
M+PSHPLWA RRLFCFIRTTNYSSAAVTAP+TASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MHPSHPLWA--RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVA+DLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAV+QFG+CPFRWDSAK
Sbjct: 61 RAADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKK 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLC+TTS+EFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNV DKKRVGI DVLF+ERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFK RPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVNRDQ + E KIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPST EEFVSS GKHFPY+MDTKILLN N IL RRMNKSNTSLSSAFG
Sbjct: 361 MLHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGS 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSS RV+A N GVQVEVQVDDLRSSKWNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSLRVNALNDGVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVD STS+NL+ NEILQKHINRLYL+WA GDIIDLSTGNQVTESF TRKHR +VSF+N
Sbjct: 481 IDFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESFKTRKHRVRVSFEN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGF TNLTARKIKACISK FGQ NVSSVNHLDESAVFVQFTKPEMVSEFL+LKEKL
Sbjct: 541 IVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDP+SVLHPLTELFD R THAAGYEAYKKICSSPMSK LFSDQAEAVGINRKT IK
Sbjct: 601 EKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTMLIK 660
Query: 661 SEEKRSRMHQAV----ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SE KRS++ QAV ETTEIQGTE EAN+LS+TNY SLRSSSM
Sbjct: 661 SEAKRSKIDQAVDMLDETTEIQGTEGEANNLSSTNYQSLRSSSM 702
BLAST of CsGy3G004220 vs. NCBI nr
Match:
XP_008449056.1 (PREDICTED: poly(A)-specific ribonuclease PARN [Cucumis melo])
HSP 1 Score: 1253 bits (3243), Expect = 0.0
Identity = 638/704 (90.62%), Postives = 661/704 (93.89%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
M+PSHPLWA RRLFCFIRTTNYSSAAVTAP+TASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MHPSHPLWA--RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVA+DLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAV+QFG+CPFRWDSAK
Sbjct: 61 RAADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKK 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLC+TTS+EFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNV DKKRVGI DVLF+ERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFK RPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQ VV+VDSRDDKELLMQEVNRDQ + E KIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQFVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPST EEFVSS GKHFPY+MDTKILLN N IL RRMNKSNTSLSSAFG
Sbjct: 361 MLHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGS 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSS RV+A N VQVEVQVDDLRSSKWNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSLRVNALNDCVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVD STS+NL+ NEILQKHINRLYL+WA GDIIDLSTGNQVTESF TRKHR +VSF+N
Sbjct: 481 IDFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESFKTRKHRVRVSFEN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGF TNLTARKIKACISK FGQ NVSSVNHLDESAVFVQFTKPEMVSEFL+LKEKL
Sbjct: 541 IVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDP+SVLHPLTELFD R THAAGYEAYKKICSSPMSK LFSDQAEAVGINRKT IK
Sbjct: 601 EKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTMLIK 660
Query: 661 SEEKRSRMHQAV----ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SE KRS++ QAV ETTEIQGTE EANDLS+TNY SLRSSSM
Sbjct: 661 SEAKRSKIDQAVDMLDETTEIQGTEGEANDLSSTNYQSLRSSSM 702
BLAST of CsGy3G004220 vs. NCBI nr
Match:
XP_023553318.1 (poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1140 bits (2950), Expect = 0.0
Identity = 580/713 (81.35%), Postives = 631/713 (88.50%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MN S PLWA RL CF RT YSSAAV++P+TASNSSFPLKNVTKSNFEA LSELRSHV
Sbjct: 1 MNLSRPLWA-PTRLLCFTRTATYSSAAVSSPATASNSSFPLKNVTKSNFEAVLSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWR+ EFDRFDVRYL VKDSAEKFAV+QFG+CPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFF+FPRHEI+VDGPSSEFLCQTTS+EFLAKYQFDFNACI+EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFA+GDE LDASSNVTN+ D KR+GI DVLFKERMKNRLHEWRDRLLSERNME
Sbjct: 181 AARKRLNFAHGDETLDASSNVTNIRDPKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSND++RQF+TIFFKMRPALTLSDFTSHQ KLIQLVIKKHFEDLCFVVV+DG+A+L
Sbjct: 241 QGQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVN DQ+E EMKIQSAIGFRHVIDLLSSEKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDQREAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
+ HIH+KFIGSLPST EEFVSS+GKHFP+IMDTKILLNGN IL +RM KS+TSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQ A++SGVQVEVQVDDL SS WNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTE---SFTTRKHRAKVS 540
IDFV SENL NE LQKHIN LYLSWA GDIIDLSTGN+ TE S ++KH+AK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRTTEPLRSNRSKKHQAKIS 540
Query: 541 FQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLK 600
F+NIVLIWGFP NL ARKIK CISK FG N+ SV H+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 EKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTT 660
+ LE+ DDP+SVLHPLTELF ++THAAGYEAYK+ICSSPM K LF+DQAEAVGIN+KTT
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKSEEKRSRMHQAV----------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SIK E +S+MH+A ETTE+QG EV ANDL NTNYH LRSSSM
Sbjct: 661 SIKPESVKSQMHEAANNNLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CsGy3G004220 vs. NCBI nr
Match:
KAG7015576.1 (Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1136 bits (2939), Expect = 0.0
Identity = 577/713 (80.93%), Postives = 632/713 (88.64%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MN S PLWA RL CFIRT YSSAAVTAP+TASNS FPLKNVTKSNFEA LSELRSHV
Sbjct: 1 MNLSRPLWA-PTRLLCFIRTATYSSAAVTAPATASNSCFPLKNVTKSNFEAVLSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWR+ EFDRFDVRYL VKDSAEKFAV+QFG+CPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFF+FPRHEI+VDGPSSEFLCQTTS+EFLAKYQFDFNACI+EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFA+GDE DASSNVTN+ D+KR+GI DVLFKERMKNRLHEWRDRLLSERNME
Sbjct: 181 AARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSN+++RQF+TIFFKMRPALTLSDFTSHQ KLIQLVIKKHFEDLCFVVV+DG+A+L
Sbjct: 241 QGQEGSNNYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVN D++E EMKIQSAIGFRHVIDLLSSEKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
+ HIH+KFIGSLPST EEFVSS+GKHFP+IMDTKILLNGN +L +RM KS+TSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGVLQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQ A++SGVQVEVQVDDL SS WNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTE---SFTTRKHRAKVS 540
IDFV SENL NE LQKHIN LYLSWA GDIIDLSTGN++TE S ++KH+AK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLK 600
F+NIVLIWGFP NL ARKIK CISK FG N+ SV H+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 EKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTT 660
+ LE+ DDP+SVLHPLTELF ++THAAGYEAYK+ICSSPM K LF+DQAEAVGIN+KTT
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKSEEKRSRMHQAV----------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SIK E +S+MH+A ETTE+QG EV ANDL NTNYH L+SSSM
Sbjct: 661 SIKPESVKSQMHEAANSSLTADMLNETTEVQGMEVGANDLRNTNYHILQSSSM 710
BLAST of CsGy3G004220 vs. ExPASy TrEMBL
Match:
A0A0A0L4V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1)
HSP 1 Score: 1388 bits (3593), Expect = 0.0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL
Sbjct: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG
Sbjct: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN
Sbjct: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL
Sbjct: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK
Sbjct: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
Query: 661 SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM
Sbjct: 661 SEEKRSRMHQAVETTEIQGTEVEANDLSNTNYHSLRSSSM 700
BLAST of CsGy3G004220 vs. ExPASy TrEMBL
Match:
A0A5D3CQS8 (Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00310 PE=3 SV=1)
HSP 1 Score: 1256 bits (3251), Expect = 0.0
Identity = 639/704 (90.77%), Postives = 663/704 (94.18%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
M+PSHPLWA RRLFCFIRTTNYSSAAVTAP+TASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MHPSHPLWA--RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVA+DLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAV+QFG+CPFRWDSAK
Sbjct: 61 RAADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKK 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLC+TTS+EFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNV DKKRVGI DVLF+ERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFK RPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVNRDQ + E KIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPST EEFVSS GKHFPY+MDTKILLN N IL RRMNKSNTSLSSAFG
Sbjct: 361 MLHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGS 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSS RV+A N GVQVEVQVDDLRSSKWNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSLRVNALNDGVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVD STS+NL+ NEILQKHINRLYL+WA GDIIDLSTGNQVTESF TRKHR +VSF+N
Sbjct: 481 IDFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESFKTRKHRVRVSFEN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGF TNLTARKIKACISK FGQ NVSSVNHLDESAVFVQFTKPEMVSEFL+LKEKL
Sbjct: 541 IVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDP+SVLHPLTELFD R THAAGYEAYKKICSSPMSK LFSDQAEAVGINRKT IK
Sbjct: 601 EKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTMLIK 660
Query: 661 SEEKRSRMHQAV----ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SE KRS++ QAV ETTEIQGTE EAN+LS+TNY SLRSSSM
Sbjct: 661 SEAKRSKIDQAVDMLDETTEIQGTEGEANNLSSTNYQSLRSSSM 702
BLAST of CsGy3G004220 vs. ExPASy TrEMBL
Match:
A0A1S3BKK0 (poly(A)-specific ribonuclease PARN OS=Cucumis melo OX=3656 GN=LOC103491038 PE=3 SV=1)
HSP 1 Score: 1253 bits (3243), Expect = 0.0
Identity = 638/704 (90.62%), Postives = 661/704 (93.89%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
M+PSHPLWA RRLFCFIRTTNYSSAAVTAP+TASNSSFPLKNVTKSNFEAALSELRSHV
Sbjct: 1 MHPSHPLWA--RRLFCFIRTTNYSSAAVTAPATASNSSFPLKNVTKSNFEAALSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVA+DLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAV+QFG+CPFRWDSAK
Sbjct: 61 RAADFVAVDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVVQFGVCPFRWDSAKK 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFFIFPRHEIEVDGPSSEFLC+TTS+EFLAKYQFDFNACIYEGISYLSRAHED
Sbjct: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCRTTSLEFLAKYQFDFNACIYEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFAYGDEMLDASSNVTNV DKKRVGI DVLF+ERMKNRLHEWRDRLLSERNMEF
Sbjct: 181 AARKRLNFAYGDEMLDASSNVTNVRDKKRVGIADVLFRERMKNRLHEWRDRLLSERNMEF 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSNDHKRQFQTIFFK RPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL
Sbjct: 241 QGQEGSNDHKRQFQTIFFKTRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQ VV+VDSRDDKELLMQEVNRDQ + E KIQSAIGFRHVIDLLSSEKKLIVGHNCFLD
Sbjct: 301 QQFVVYVDSRDDKELLMQEVNRDQNKAAETKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
MLHIHRKFIGSLPST EEFVSS GKHFPY+MDTKILLN N IL RRMNKSNTSLSSAFG
Sbjct: 361 MLHIHRKFIGSLPSTAEEFVSSFGKHFPYVMDTKILLNDNYILRRRMNKSNTSLSSAFGS 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSS RV+A N VQVEVQVDDLRSSKWNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSLRVNALNDCVQVEVQVDDLRSSKWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQN 540
IDFVD STS+NL+ NEILQKHINRLYL+WA GDIIDLSTGNQVTESF TRKHR +VSF+N
Sbjct: 481 IDFVDCSTSKNLVDNEILQKHINRLYLNWASGDIIDLSTGNQVTESFKTRKHRVRVSFEN 540
Query: 541 IVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKL 600
IVLIWGF TNLTARKIKACISK FGQ NVSSVNHLDESAVFVQFTKPEMVSEFL+LKEKL
Sbjct: 541 IVLIWGFSTNLTARKIKACISKVFGQANVSSVNHLDESAVFVQFTKPEMVSEFLNLKEKL 600
Query: 601 EKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIK 660
EKRDDP+SVLHPLTELFD R THAAGYEAYKKICSSPMSK LFSDQAEAVGINRKT IK
Sbjct: 601 EKRDDPISVLHPLTELFDARATHAAGYEAYKKICSSPMSKLLFSDQAEAVGINRKTMLIK 660
Query: 661 SEEKRSRMHQAV----ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SE KRS++ QAV ETTEIQGTE EANDLS+TNY SLRSSSM
Sbjct: 661 SEAKRSKIDQAVDMLDETTEIQGTEGEANDLSSTNYQSLRSSSM 702
BLAST of CsGy3G004220 vs. ExPASy TrEMBL
Match:
A0A6J1EWU6 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438751 PE=3 SV=1)
HSP 1 Score: 1135 bits (2935), Expect = 0.0
Identity = 579/713 (81.21%), Postives = 630/713 (88.36%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MN S PLWA RL CFIRT YSSAAVT P+TASNSSFPLKNVTKSNFEA LSELRSHV
Sbjct: 1 MNLSRPLWA-PTRLLCFIRTATYSSAAVTTPATASNSSFPLKNVTKSNFEAVLSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWR+ EFDRFDVRYL VKDSAEKFAV+QFG+CPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFF+FPRHEI VDGPSSEFLCQTTS+EFLAKYQFDFNACI+EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFVFPRHEILVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFA+GDE DASSNVTN+ D+KR+GI DVLFKERMKNRLHEWRDRLLSERNME
Sbjct: 181 AARKRLNFAHGDETSDASSNVTNIRDQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEGSND++RQF+TIFFKMRPALTLSDFTSHQ KLIQLVIKKHFEDLCFVVV+DG+A+L
Sbjct: 241 QGQEGSNDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGDANL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVN D++E EMKIQSAIGFRHVIDLLSSEKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNSDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
+ HIH+KFIGSLPST EEFVSS+GKHFP+IMDTKILLNGN IL +RM KS+TSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPSTAEEFVSSIGKHFPFIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQ A++SGVQVEVQVDDL SS WNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSQSNPAFSSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTE---SFTTRKHRAKVS 540
IDFV SENL NE LQKHIN LYLSWA GDIIDLSTGN++TE S ++KH+AK+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKKHQAKIS 540
Query: 541 FQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLK 600
F+NIVLIWGFP NL ARKIK CISK FG N+ SV H+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 EKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTT 660
+ LE+ DDP+SVLHPLTELF + T+AAGYEAYK+ICSSPM K LF+DQAEAVGIN+KTT
Sbjct: 601 KNLERHDDPISVLHPLTELFGAKGTNAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTT 660
Query: 661 SIKSEEKRSRMHQAV----------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SIK E +S+MH+A ETTE+QG EV ANDL NTNYH LRSSSM
Sbjct: 661 SIKPESVKSQMHEAANNSLTADMLNETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CsGy3G004220 vs. ExPASy TrEMBL
Match:
A0A6J1L1G4 (poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500250 PE=3 SV=1)
HSP 1 Score: 1130 bits (2924), Expect = 0.0
Identity = 576/713 (80.79%), Postives = 628/713 (88.08%), Query Frame = 0
Query: 1 MNPSHPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHV 60
MN S PLWA RL CFIRT YSSAAVTAP+TASNSSFPLKNVTKSNFEA LSELRSHV
Sbjct: 1 MNLSRPLWA-PTRLLCFIRTATYSSAAVTAPATASNSSFPLKNVTKSNFEAVLSELRSHV 60
Query: 61 RAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKN 120
RAADFVAIDLEMTGITSAPWR+ EFDRFDVRYL VKDSAEKFAV+QFG+CPFRWDSAKN
Sbjct: 61 RAADFVAIDLEMTGITSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFGVCPFRWDSAKN 120
Query: 121 SFVAHPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHED 180
SFVAHPHNFF+FPRHEI+VDGPSSEFLCQTTS+EFLAKYQFDFNACI+EGISYLSRAHED
Sbjct: 121 SFVAHPHNFFVFPRHEIQVDGPSSEFLCQTTSIEFLAKYQFDFNACIHEGISYLSRAHED 180
Query: 181 AARKRLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEF 240
AARKRLNFA+GDE LDASSNVTN+ ++KR+GI DVLFKERMKNRLHEWRDRLLSERNME
Sbjct: 181 AARKRLNFAHGDETLDASSNVTNIRNQKRIGIADVLFKERMKNRLHEWRDRLLSERNMEC 240
Query: 241 QGQEGSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADL 300
QGQEG+ND++RQF+TIFFKMRPALTLSDFTSHQ KLIQLVIKKHFEDLCFVVV+DGNA+L
Sbjct: 241 QGQEGANDYQRQFETIFFKMRPALTLSDFTSHQTKLIQLVIKKHFEDLCFVVVDDGNANL 300
Query: 301 QQLVVFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLD 360
QQLVV+VDSRDDKELLMQEVN D++E EMKIQSAIGFRHVIDLLSSEKKLI+GHNCFLD
Sbjct: 301 QQLVVYVDSRDDKELLMQEVNCDRQEAAEMKIQSAIGFRHVIDLLSSEKKLIIGHNCFLD 360
Query: 361 MLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGL 420
+ HIH+KFIGSLP T EEFVSS+GK FP IMDTKILLNGN IL +RM KS+TSLSSAF L
Sbjct: 361 IAHIHKKFIGSLPLTAEEFVSSIGKRFPLIMDTKILLNGNGILQQRMKKSSTSLSSAFAL 420
Query: 421 LCPHIAFSSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMG 480
LCPHIAFSSQ A+NSGVQVEVQVDDL SS WNSGD HEAGYDAFMTGCVFAQAC+LMG
Sbjct: 421 LCPHIAFSSQSNPAFNSGVQVEVQVDDLSSSNWNSGDKHEAGYDAFMTGCVFAQACNLMG 480
Query: 481 IDFVDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTE---SFTTRKHRAKVS 540
IDFV SENL NE LQKHIN LYLSWA GDIIDLSTGN++TE S +++H+ K+S
Sbjct: 481 IDFV--LPSENLADNEKLQKHINHLYLSWASGDIIDLSTGNRMTEPLRSNRSKRHQVKIS 540
Query: 541 FQNIVLIWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLK 600
F+NIVLIWGFP NL ARKIK CISK FG N+ SV H+DESAVFVQF KPEMVSEFLDLK
Sbjct: 541 FENIVLIWGFPANLNARKIKECISKVFGLANIVSVYHIDESAVFVQFAKPEMVSEFLDLK 600
Query: 601 EKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTT 660
E LE+ DDP+SVLHPLTELF ++THAAGYEAYK+ICSSPM K LF+DQAEAVGIN+KT
Sbjct: 601 ENLERHDDPISVLHPLTELFGAKSTHAAGYEAYKEICSSPMFKVLFADQAEAVGINQKTM 660
Query: 661 SIKSEEKRSRMHQAV----------ETTEIQGTEVEANDLSNTNYHSLRSSSM 700
SIK + + +MH+A ETTE+QG EV ANDL NTNYH LRSSSM
Sbjct: 661 SIKLKSVKGQMHEAANSSLTADMLKETTEVQGMEVGANDLRNTNYHILRSSSM 710
BLAST of CsGy3G004220 vs. TAIR 10
Match:
AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 726.9 bits (1875), Expect = 1.6e-209
Identity = 369/681 (54.19%), Postives = 484/681 (71.07%), Query Frame = 0
Query: 5 HPLWALQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHVRAAD 64
H W L R L C +++ + T+ + ++ ++FPLK+VT+SNFE L++LRS V+AAD
Sbjct: 4 HKRWPL-RSLVCSF-SSSAAETVTTSTAASATAAFPLKHVTRSNFETTLNDLRSLVKAAD 63
Query: 65 FVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKNSFVA 124
FVAIDLEMTG+TSAPWRD LEFDR+DVRYL VKDSAEKFAV+QFG+CPFRWDS SFV+
Sbjct: 64 FVAIDLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEKFAVVQFGVCPFRWDSRTQSFVS 123
Query: 125 HPHNFFIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHEDAARK 184
+PHNFF+FPR E+ D P+ EFLCQTTSM+FLAKYQFDFN CI+EGISYLSR E+ A K
Sbjct: 124 YPHNFFVFPRQELTFDPPAHEFLCQTTSMDFLAKYQFDFNTCIHEGISYLSRREEEEASK 183
Query: 185 RLNFAYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEFQGQE 244
RL +G++ +D+S + K V + DVLF RM+ L+EWR LL N +
Sbjct: 184 RLKMLHGEDGIDSSGETEEL---KLVRLADVLFAARMEKLLNEWRSGLLHGGNASSEFPR 243
Query: 245 GSNDHKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADLQQLV 304
SN + +T+F MRPAL+L FTSHQ++++ V++KHF DL ++ ND ++ + +V
Sbjct: 244 ISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIV 303
Query: 305 VFVDSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLDMLHI 364
V+ DS DKE LM+E ++K + E KIQSAIGFR VIDLL+SEKKLIVGHNCFLD+ H+
Sbjct: 304 VYTDSDSDKENLMKEAKDERKRLAERKIQSAIGFRQVIDLLASEKKLIVGHNCFLDIAHV 363
Query: 365 HRKFIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGLLCPH 424
+ KF+G LPST E+FV+S+ HFPYI+DTKILLN N +L +RM KS+TSLSSAF LCP
Sbjct: 364 YSKFVGPLPSTAEKFVASINSHFPYIVDTKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQ 423
Query: 425 IAFSSQRVSAW-NSGVQVEVQVDDLRSSKWNSGDTHEAGYDAFMTGCVFAQACDLMGIDF 484
I FSS+ ++ V ++V++D++R S WN+G HEAGYDAFMTGC+FAQAC+ +G DF
Sbjct: 424 IEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAGGKHEAGYDAFMTGCIFAQACNHLGFDF 483
Query: 485 VDRSTSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTTRKHRAKVSFQNIVL 544
S ++ NE L+K+INRLYLSW RGDIIDL TG+ +++ +K ++NIVL
Sbjct: 484 KQHSQLDDFAQNEKLEKYINRLYLSWTRGDIIDLRTGHSNADNWRV----SKFKYENIVL 543
Query: 545 IWGFPTNLTARKIKACISKAFGQTNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKLEKR 604
IW FP L AR IK CI KAFG +V+SV H+D+SAVFV F E+V +FL LK +LE
Sbjct: 544 IWNFPRKLKARGIKECICKAFGSASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESS 603
Query: 605 DDPLSVLHPLTELFDVRTTHAAGYEAYKKICSSPMSKHLFSDQAEAVGINRKTTSIKSEE 664
D P+SVLHPL+++ + T AA YEAYK+ICSS +S+ +FSDQAE VG+ +T E
Sbjct: 604 DGPVSVLHPLSKILEGGNTGAADYEAYKEICSSHVSEVMFSDQAETVGVKSRTRPNAQCE 663
Query: 665 KRSRMHQAVETTEIQGTEVEA 685
+R V T ++A
Sbjct: 664 TETREENTVTVTHKASDLIDA 675
BLAST of CsGy3G004220 vs. TAIR 10
Match:
AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 531.6 bits (1368), Expect = 9.8e-151
Identity = 275/533 (51.59%), Postives = 366/533 (68.67%), Query Frame = 0
Query: 153 MEFLAKYQFDFNACIYEGISYLSRAHEDAARKRLNFAYGDEMLDASSNVTNVMDKKRVGI 212
M+FLAKYQFDFN CI+EGISYLSR E+ A KRL +G++ +D+S + K V +
Sbjct: 1 MDFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEEL---KLVRL 60
Query: 213 PDVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSNDHKRQFQTIFFKMRPALTLSDFTSH 272
DVLF RM+ L+EWR LL N + SN + +T+F MRPAL+L FTSH
Sbjct: 61 ADVLFAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSH 120
Query: 273 QIKLIQLVIKKHFEDLCFVVVNDGNADLQQLVVFVDSRDDKELLMQEVNRDQKEVNEMKI 332
Q++++ V++KHF DL ++ ND ++ + +VV+ DS DKE LM+E ++K + E KI
Sbjct: 121 QLRVLNSVLRKHFGDLVYIHSNDKSSSSRDIVVYTDSDSDKENLMKEAKDERKRLAERKI 180
Query: 333 QSAIGFRHVIDLLSSEKKLIVGHNCFLDMLHIHRKFIGSLPSTTEEFVSSLGKHFPYIMD 392
QSAIGFR VIDLL+SEKKLIVGHNCFLD+ H++ KF+G LPST E+FV+S+ HFPYI+D
Sbjct: 181 QSAIGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVD 240
Query: 393 TKILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAFSSQRVSAW-NSGVQVEVQVDDLRSS 452
TKILLN N +L +RM KS+TSLSSAF LCP I FSS+ ++ V ++V++D++R S
Sbjct: 241 TKILLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCS 300
Query: 453 KWNSGDTHEAGYDAFMTGCVFAQACDLMGIDFVDRSTSENLLGNEILQKHINRLYLSWAR 512
WN+G HEAGYDAFMTGC+FAQAC+ +G DF S ++ NE L+K+INRLYLSW R
Sbjct: 301 NWNAGGKHEAGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTR 360
Query: 513 GDIIDLSTGNQVTESFTTRKHRAKVSFQNIVLIWGFPTNLTARKIKACISKAFGQTNVSS 572
GDIIDL TG+ +++ +K ++NIVLIW FP L AR IK CI KAFG +V+S
Sbjct: 361 GDIIDLRTGHSNADNWRV----SKFKYENIVLIWNFPRKLKARGIKECICKAFGSASVTS 420
Query: 573 VNHLDESAVFVQFTKPEMVSEFLDLKEKLEKRDDPLSVLHPLTELFDVRTTHAAGYEAYK 632
V H+D+SAVFV F E+V +FL LK +LE D P+SVLHPL+++ + T AA YEAYK
Sbjct: 421 VYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADYEAYK 480
Query: 633 KICSSPMSKHLFSDQAEAVGINRKTTSIKSEEKRSRMHQAVETTEIQGTEVEA 685
+ICSS +S+ +FSDQAE VG+ +T E +R V T ++A
Sbjct: 481 EICSSHVSEVMFSDQAETVGVKSRTRPNAQCETETREENTVTVTHKASDLIDA 526
BLAST of CsGy3G004220 vs. TAIR 10
Match:
AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 233.0 bits (593), Expect = 7.2e-61
Identity = 181/630 (28.73%), Postives = 291/630 (46.19%), Query Frame = 0
Query: 10 LQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHVRAADFVAID 69
+QRR I SA T + + +K V KSNF L E+R+ + ++DF+A+
Sbjct: 1 MQRRFLSSI------SATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALS 60
Query: 70 LEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKNSFVAHPHNF 129
L+ TG +A W + D YL K +AE++ +LQF +CPF +K HP+NF
Sbjct: 61 LQNTGSYAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSK--LTVHPYNF 120
Query: 130 FIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYEGISYLSRAHEDAAR-KRLNF 189
+FPR E++ PS F CQ + + +A+ FDFN CIYEGISYLSRA E A++ N
Sbjct: 121 HLFPRDELKCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENP 180
Query: 190 AYGDEMLDASSNVTNVMDKKRVGIPDVLFKERMKNRLHEWRDRLLSERNMEFQGQEGSND 249
D + +SS T + D +F R+++R+ WR + + S+
Sbjct: 181 ILADSVTVSSSPAT---------VADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSL 240
Query: 250 HKRQFQTIFFKMRPALTLSDFTSHQIKLIQLVIKKHFEDLCFVVVNDGNADLQQL-VVFV 309
+ + + R LT+ + Q++LI ++ + +D+ ++V + Q + VF+
Sbjct: 241 RRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFM 300
Query: 310 DSRDDKELLMQEVNRDQKEVNEMKIQSAIGFRHVIDLLSSEKKLIVGHNCFLDMLHIHRK 369
S++DK+L +E+ +KE N + GFR V+D +SS +K +V N D IH K
Sbjct: 301 SSKEDKDLFKRELKDLEKEEN----RRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAK 360
Query: 370 FIGSLPSTTEEFVSSLGKHFPYIMDTKILLNGNNILIRRMNKSNTSLSSAFGLLCPHIAF 429
F+G LPS ++F SSL FP ++D + + L N SN L +A L + F
Sbjct: 361 FLGPLPSNVDDFSSSLSSAFPNVVDLSQFMKEISPL---SNISN--LPAAMSSL--NRFF 420
Query: 430 SSQRVSAWNSGVQVEVQVDDLRSSKWNSGDTHEA-GYDAFMTGCVFAQACDLMGIDFVDR 489
+ V N G V++ + H++ G +A M +FA+ C + +
Sbjct: 421 APVDVEVANQGCPVKLD------------EGHQSHGQNAVMISQLFAKLCT------IQK 480
Query: 490 STSENLLGNEILQKHINRLYLSWARGDIIDLSTGNQVTESFTT-RKHRAKVSFQNIVLIW 549
S + NE Q S + + + N E+ K+ +VS +N+V IW
Sbjct: 481 SDLSTIQSNEDFQ-----ALASDEHANSVTSCSKNAGDENVKVWSKNSRRVSSENLVFIW 540
Query: 550 GFPTNLTARKIKACISKAFGQ-TNVSSVNHLDESAVFVQFTKPEMVSEFLDLKEKLEKRD 609
G +TA K+K + K+ V ++D S+ + F + FL E+ D
Sbjct: 541 GLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWESGPSETFLSAVNNEEQLD 572
Query: 610 DPLSVLHPLTELFDVRTTHAAGYEAYKKIC 635
L + AGYE YK+ C
Sbjct: 601 GSLREM-------VAEGLRGAGYETYKRAC 572
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LG26 | 2.2e-208 | 54.19 | Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ... | [more] |
| Q8W4C3 | 1.0e-59 | 28.73 | Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2... | [more] |
| Q90ZA1 | 3.1e-40 | 26.08 | Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1 | [more] |
| Q7ZU92 | 7.5e-39 | 26.93 | Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2 | [more] |
| P69341 | 8.3e-38 | 25.77 | Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004148252.1 | 0.0 | 100.00 | poly(A)-specific ribonuclease PARN isoform X1 [Cucumis sativus] >KGN56034.1 hypo... | [more] |
| KAA0065746.1 | 0.0 | 90.77 | poly(A)-specific ribonuclease PARN [Cucumis melo var. makuwa] >TYK13770.1 poly(A... | [more] |
| XP_008449056.1 | 0.0 | 90.63 | PREDICTED: poly(A)-specific ribonuclease PARN [Cucumis melo] | [more] |
| XP_023553318.1 | 0.0 | 81.35 | poly(A)-specific ribonuclease PARN isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| KAG7015576.1 | 0.0 | 80.93 | Poly(A)-specific ribonuclease PARN [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L4V6 | 0.0 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G048430 PE=3 SV=1 | [more] |
| A0A5D3CQS8 | 0.0 | 90.77 | Poly(A)-specific ribonuclease PARN OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
| A0A1S3BKK0 | 0.0 | 90.63 | poly(A)-specific ribonuclease PARN OS=Cucumis melo OX=3656 GN=LOC103491038 PE=3 ... | [more] |
| A0A6J1EWU6 | 0.0 | 81.21 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita moschata OX=3662 GN=L... | [more] |
| A0A6J1L1G4 | 0.0 | 80.79 | poly(A)-specific ribonuclease PARN isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G55870.1 | 1.6e-209 | 54.19 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT1G55870.2 | 9.8e-151 | 51.59 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT3G25430.1 | 7.2e-61 | 28.73 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
