CsGy3G004090 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G004090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	vegetative cell wall protein gp1-like
Location	Gy14Chr3: 3340330 .. 3340908 (+)
RNA-Seq Expression	CsGy3G004090
Synteny	CsGy3G004090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGTTTGCTTTGTTTATTACTCTTCTCTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCTTCATTCTCCTTCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCCACCGATGGCTACTCCGACAAGCTTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGA

mRNA sequence

ATGGCCAAGTTTGCTTTGTTTATTACTCTTCTCTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCTTCATTCTCCTTCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCCACCGATGGCTACTCCGACAAGCTTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGA

Coding sequence (CDS)

ATGGCCAAGTTTGCTTTGTTTATTACTCTTCTCTTTTTGTTTTCGCCATTTATTGGCCTCGTTTTCGCTAACGATTCCCCTGCCGCCTCCCCAAAACCTCCTAAAACGCTTCATTCTCCTTCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCACACTGTATCTCCGTCTAAATCTCCGGCTGCTTCTCCACCGGTCGTAACTCCGGTAATTTCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCTCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGCTTTCGTCGCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATCCCGGCAAATCCGATTTCTGGAGGGTCTCCCGTGGGGACGCCGTCGATATTTCCGTCGAGCAGTAGCCCACCGATGGCTACTCCGACAAGCTTAGCACCGGAAACGGCGGAGAGGCCTGGAAACGACGCGTCGGCGTCAGGAAAGTACAAGATCGGGGTGGAGGTTATTTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGA

Protein sequence

MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVILSGLSIWAAWAF*

Homology

[Close]

BLAST of CsGy3G004090 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-05
Identity = 60/155 (38.71%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 26  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPS 85
           SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS
Sbjct: 425 SPSISPSPPITVPSPPTTPSPGGSPPSPSIVPS-PPSTTPSPGSPPTSPTTPTPGGSPPS 484

Query: 86  VAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVEPEI-PANPISGGSPVGTPS- 145
              +  P   P SSP+  +P  SPPS  P   SP G+P  P I P+ PI+  SP  TP+ 
Sbjct: 485 SPTTPTPGGSPPSSPTTPTPGGSPPSS-PTTPSPGGSPPSPSISPSPPITVPSPPSTPTS 544

Query: 146 -------IFPSSSSPPMATPTSLAPETAERPGNDA 168
                    P+ SSP  + PT   P T   PG ++
Sbjct: 545 PGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNS 577

[Close]

BLAST of CsGy3G004090 vs. NCBI nr
Match: XP_011652729.1 (extensin [Cucumis sativus] >KGN56020.1 hypothetical protein Csa_011485 [Cucumis sativus])

HSP 1 Score: 343 bits (880), Expect = 2.69e-118
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS
Sbjct: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120
           PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV
Sbjct: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120

Query: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180
           EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI
Sbjct: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180

Query: 181 LSGLSIWAAWAF 192
           LSGLSIWAAWAF
Sbjct: 181 LSGLSIWAAWAF 192

[Close]

BLAST of CsGy3G004090 vs. NCBI nr
Match: KAA0065729.1 (extensin-like [Cucumis melo var. makuwa] >TYK13755.1 extensin-like [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (787), Expect = 3.86e-104
Identity = 173/192 (90.10%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M  FALF T+LF  SPFIGLVFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKS
Sbjct: 1   MGNFALF-TVLFFLSPFIGLVFAYDSPAASPKPPKTAHSPSPAHSPVVSPPSRSLSPSKS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120
           P ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENSP+SSPPSPLPFDASPVGAPV
Sbjct: 61  PTASPPMLTPEISPALATPPSVAPSKAPAAVPISSPSENSPVSSPPSPLPFDASPVGAPV 120

Query: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180
           EPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+
Sbjct: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTNLAPETAERPGNDASASGRYKIGVEVM 180

Query: 181 LSGLSIWAAWAF 192
           LSGLSIWAAWAF
Sbjct: 181 LSGLSIWAAWAF 191

[Close]

BLAST of CsGy3G004090 vs. NCBI nr
Match: XP_038904208.1 (calphotin-like [Benincasa hispida])

HSP 1 Score: 263 bits (671), Expect = 2.50e-86
Identity = 158/202 (78.22%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M KFALF T+L LFSPF G+VF  DSPAA+PKP KT HSPSPAHSPVVSPPS + SP K 
Sbjct: 1   MDKFALF-TVLILFSPFTGVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPSPSASPLKP 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSP------SENSPLSSPPSPLPFDAS 120
           P ASPP +TP ISPA ATPPSVAP KAPA+ P+SSP      SE SP+SSPPSP P DAS
Sbjct: 61  PIASPPAITPAISPAFATPPSVAPPKAPASAPVSSPAVSPVVSEISPVSSPPSPPPSDAS 120

Query: 121 PV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS 180
           PV    G PVEPEIPANPISGG+PVGTPSIFPSSSSPPM+TP SLAPETAERPGNDASAS
Sbjct: 121 PVATPVGTPVEPEIPANPISGGTPVGTPSIFPSSSSPPMSTPASLAPETAERPGNDASAS 180

Query: 181 GKYKIGVEVILSGLSIWAAWAF 192
           GK KIGVEVILSGLSIWAAWAF
Sbjct: 181 GKCKIGVEVILSGLSIWAAWAF 201

[Close]

BLAST of CsGy3G004090 vs. NCBI nr
Match: XP_022932347.1 (gibberellin-regulated protein 14-like [Cucurbita moschata])

HSP 1 Score: 244 bits (622), Expect = 7.09e-79
Identity = 146/202 (72.28%), Postives = 162/202 (80.20%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M KFALF T+L LFS F  +V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  S
Sbjct: 1   MEKFALF-TVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN------SPLSSPPSPLPFDAS 120
           P +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +      SP+ SPPSPLP DAS
Sbjct: 61  PTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDAS 120

Query: 121 PV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS 180
           PV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASAS
Sbjct: 121 PVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASAS 180

Query: 181 GKYKIGVEVILSGLSIWAAWAF 192
           GKY+IG EVILSGLSIWA WAF
Sbjct: 181 GKYRIGAEVILSGLSIWAVWAF 201

[Close]

BLAST of CsGy3G004090 vs. NCBI nr
Match: XP_023552940.1 (gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241 bits (616), Expect = 5.07e-78
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M KF LF T+L LFS F  +VF  DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  S
Sbjct: 1   MEKFPLF-TVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLS--SPPSPLPFDASPV-- 120
           P +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +  +S  SPPSPLP DASPV  
Sbjct: 61  PTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTA 120

Query: 121 --GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYK 180
             GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+
Sbjct: 121 PVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYR 180

Query: 181 IGVEVILSGLSIWAAWAF 192
           IG EVILSGLS+WA WAF
Sbjct: 181 IGAEVILSGLSLWAVWAF 197

[Close]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL
Match: A0A0A0L269 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1)

HSP 1 Score: 343 bits (880), Expect = 1.30e-118
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS
Sbjct: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120
           PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV
Sbjct: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120

Query: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180
           EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI
Sbjct: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180

Query: 181 LSGLSIWAAWAF 192
           LSGLSIWAAWAF
Sbjct: 181 LSGLSIWAAWAF 192

[Close]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL
Match: A0A5A7VJY8 (Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 1.87e-104
Identity = 173/192 (90.10%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M  FALF T+LF  SPFIGLVFA DSPAASPKPPKT HSPSPAHSPVVSPPS ++SPSKS
Sbjct: 1   MGNFALF-TVLFFLSPFIGLVFAYDSPAASPKPPKTAHSPSPAHSPVVSPPSRSLSPSKS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPV 120
           P ASPP++TP ISPALATPPSVAPSKAPAAVPISSPSENSP+SSPPSPLPFDASPVGAPV
Sbjct: 61  PTASPPMLTPEISPALATPPSVAPSKAPAAVPISSPSENSPVSSPPSPLPFDASPVGAPV 120

Query: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYKIGVEVI 180
           EPEIPANPISGGSPVGTPSIFPSSSSPPMATPT+LAPETAERPGNDASASG+YKIGVEV+
Sbjct: 121 EPEIPANPISGGSPVGTPSIFPSSSSPPMATPTNLAPETAERPGNDASASGRYKIGVEVM 180

Query: 181 LSGLSIWAAWAF 192
           LSGLSIWAAWAF
Sbjct: 181 LSGLSIWAAWAF 191

[Close]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL
Match: A0A6J1EWE6 (gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438730 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 3.43e-79
Identity = 146/202 (72.28%), Postives = 162/202 (80.20%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M KFALF T+L LFS F  +V   DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  S
Sbjct: 1   MEKFALF-TVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN------SPLSSPPSPLPFDAS 120
           P +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +      SP+ SPPSPLP DAS
Sbjct: 61  PTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDAS 120

Query: 121 PV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS 180
           PV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASAS
Sbjct: 121 PVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASAS 180

Query: 181 GKYKIGVEVILSGLSIWAAWAF 192
           GKY+IG EVILSGLSIWA WAF
Sbjct: 181 GKYRIGAEVILSGLSIWAVWAF 201

[Close]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL
Match: A0A6J1L107 (gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111500173 PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 1.25e-74
Identity = 141/202 (69.80%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60
           M  FALF T+L LFS F  +V A DS AA+PKP KT +SPSPAHSPV SPPSH+ SP  S
Sbjct: 1   MENFALF-TVLILFSAFTAVVLAYDSTAAAPKPTKTAYSPSPAHSPVFSPPSHSASPLTS 60

Query: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN------SPLSSPPSPLPFDAS 120
           P +SPP  TP ISP+L TPP V+P K PAA P+SSP+ +      SP+ SPPSPLP DAS
Sbjct: 61  PTSSPPAKTPAISPSLVTPPPVSPPKTPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDAS 120

Query: 121 PV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS 180
           PV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DAS S
Sbjct: 121 PVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASTS 180

Query: 181 GKYKIGVEVILSGLSIWAAWAF 192
           GKY+IG EVILSGLSIWA WAF
Sbjct: 181 GKYRIGAEVILSGLSIWAVWAF 201

[Close]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL
Match: A0A6J1DWL9 (classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC111024744 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 5.45e-72
Identity = 141/200 (70.50%), Postives = 157/200 (78.50%), Query Frame = 0


Query: 8   ITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPV 67
           +T+L LF+PF G+V A D+PA SPKP KT HSP P HSP VS PSH+ SPSKSPAASPP 
Sbjct: 7   LTVLVLFAPFTGVVLAYDAPAPSPKPTKTPHSPPPVHSPAVSRPSHSASPSKSPAASPPA 66

Query: 68  VTPVISPALATPPSVAPSKAPAAVPISSP------SENSPLSSPPSPLPFDASPV----- 127
            TP ISPAL+TPP+ +P +APAA P SSP      SE SP+SSPPSP P  ASPV     
Sbjct: 67  TTPTISPALSTPPAASP-EAPAAAPASSPVASPVGSEVSPVSSPPSPPPSVASPVSTPAT 126

Query: 128 ---GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASG-K 187
              G+P EPEIPANPI+GGSPV TPSIFPSSSSPPM++P SLAPETAERPGNDASAS  K
Sbjct: 127 TPAGSPPEPEIPANPITGGSPVETPSIFPSSSSPPMSSPGSLAPETAERPGNDASASEWK 186

Query: 188 YKIGVEVILSGLSIWAAWAF 192
           YKIG EVILSG+SIWAAWAF
Sbjct: 187 YKIGAEVILSGISIWAAWAF 205

[Close]

BLAST of CsGy3G004090 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.9e-06
Identity = 60/155 (38.71%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 26  SPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVTPVISPALAT----PPS 85
           SP+ SP PP T+ SP    SP  SPPS ++ PS  P+ +P   +P  SP   T    PPS
Sbjct: 425 SPSISPSPPITVPSPPTTPSPGGSPPSPSIVPS-PPSTTPSPGSPPTSPTTPTPGGSPPS 484

Query: 86  VAPSKAPAAVPISSPSENSPLSSPPSPLPFDASPVGAPVEPEI-PANPISGGSPVGTPS- 145
              +  P   P SSP+  +P  SPPS  P   SP G+P  P I P+ PI+  SP  TP+ 
Sbjct: 485 SPTTPTPGGSPPSSPTTPTPGGSPPSS-PTTPSPGGSPPSPSISPSPPITVPSPPSTPTS 544

Query: 146 -------IFPSSSSPPMATPTSLAPETAERPGNDA 168
                    P+ SSP  + PT   P T   PG ++
Sbjct: 545 PGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNS 577

[Close]

BLAST of CsGy3G004090 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.2e-04
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 26  SPAASP---KPPKTLHSPSPAHSPVVSPPSHTVSPSKSPAASPPVVT------PVISPAL 85
           SP A+P    PP T  +P PA  PV +PP  T   +K P A+PP  T      PV  P +
Sbjct: 598 SPVATPPAATPPIT--TPPPAKPPVATPPIATPPIAKPPVATPPTATPPIATSPVAKPPV 657

Query: 86  ATPP--SVAPSKAPAAVP--ISSPSENSPLSSPPSPLPFDASPVGAPVEPEIPANPISGG 145
           ATPP  +  P+K P A+P   + P    P+++PP+  P  A+P   P+       P +  
Sbjct: 658 ATPPIKTPPPAKPPVAIPPIATPPVAKPPVATPPTATPPIATP---PIATPPVVTPPTAT 717

Query: 146 SPVGTPSI------FPSSSSPPMATPTSLAPETAERP 164
            PV TP I       P +++PP+A P    P TA+ P
Sbjct: 718 PPVATPPIAKPPTTIPPTATPPVAMPPIATPPTAKPP 749

The following BLAST results are available for this feature:

BLAST of CsGy3G004090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN46	9.7e-05	38.71	Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of CsGy3G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652729.1	2.69e-118	100.00	extensin [Cucumis sativus] >KGN56020.1 hypothetical protein Csa_011485 [Cucumis ...	[more]
KAA0065729.1	3.86e-104	90.10	extensin-like [Cucumis melo var. makuwa] >TYK13755.1 extensin-like [Cucumis melo...	[more]
XP_038904208.1	2.50e-86	78.22	calphotin-like [Benincasa hispida]	[more]
XP_022932347.1	7.09e-79	72.28	gibberellin-regulated protein 14-like [Cucurbita moschata]	[more]
XP_023552940.1	5.07e-78	72.73	gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G004090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L269	1.30e-118	100.00	Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1	[more]
A0A5A7VJY8	1.87e-104	90.10	Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 ...	[more]
A0A6J1EWE6	3.43e-79	72.28	gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1L107	1.25e-74	69.80	gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC11150017...	[more]
A0A6J1DWL9	5.45e-72	70.50	classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CsGy3G004090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18670.1	6.9e-06	38.71	Leucine-rich repeat (LRR) family protein	[more]
AT3G22142.1	2.2e-04	35.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G004090.2	CsGy3G004090.2	mRNA