CsGy3G003450 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G003450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	replication factor C subunit 2
Location	Gy14Chr3: 2766354 .. 2771827 (-)
RNA-Seq Expression	CsGy3G003450
Synteny	CsGy3G003450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGAATTGGAAGGGCAAAGTTCTTCTTCCTGAATTCGTTCTACTCTCTCTCGAGCATCCCAATTCATCTGTTCGAACATTCTATGGCGTCTTCTTCAGGCAGCAGTAGCAACTACGACATTCCATGGGTGGAGAAGTACAGGCCCAACAAGGTCACCGACATTGTGGGTAATGAAGATGCAGTTTCTCGTCTCCAAGTCATTGCTCGGGACGGCAACATGCCCAATCTCATATTATCTGTACTCTTCTCCATCTCTAATATTTTCCGTAATTTTCCCTCTTTAGTTTGCATTGCACCAATTGGGTTTCTGTTAATTTTTAGTCTGACTACTAACTTGTTTACAATTGGTACTGAAAATGGACTTGTGTATCTAGAGCTATGTGAAGTAGAAAATCATGCAGCTTGAACGTTTTCTTAATGGCTTTGGGGGTTTGGGAACTAGTAAGGCTCGAATTTTATCCTAATTTTTGTTATCATTTTTGGCGGGGTTTTAATGTTCTGTAATCAAATGCACAATTTTTTTTCTAAAAGGGGTTGATGCAAGTGACAAGTAAAAGGCTCTATAAGTGCTAATTTACGTTGTTGATGGTTTTTTTTTTAATGTACTGCAGCTTGAATTTTGTTGCTATGATGAGGTTTTTGATGAAATGTTGTAGGGTTAGACAGTTTTGGTAGGAACATGTATTGCTATGGATTTTAATGTATGTTGTTGCTACATGTTTGTTTTCTAGGGTCCGCCAGGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCATGAGCTCTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGTGAGATATTCTATGGTTTTTAAGTCTCAAAATATTTCAAATGTTACTTGATCTGTGTTTTTTTTCTAATCTGAGTTCTTGTTTAGGGGAATAGATGTCGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACATTGCCTCCTGGTCGACACAAAGTGGTAATATTGGATGAAGCTGACAGGTAGGTTTCAACGGATATAATGCTAGGGAAGCCCAAACACTTTTTTTGGGGAGAGTGTTCTTGTCAGGCATGCATGCGAAAAAAAGTGTCCTATTTTATTTTGTATTTTCTTTTCGGTTTCGAACACTCATGGGACACATAAACCTATAAAATTGATTGAGAATTTGAAACAAGAATTTTCTTTGTCTTCTTTTGCTCTGCTCTTCAGTTTCTTACTTTGAGTCCTGTTATTAATTTGTTACTTTTGGTGGTAATTATGATTGTGAAAATAATCCAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATTTATTCAAACACAACACGTTTTGCCCTTGCATGTAATACCTCCTCAAAAATTATTGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGATTCAGGCAGAAAAGGTATCGTTCGTTTATTTGTCATAATGCCTAGACTACATTTCTGTTGTTATAAATATAGTCATTCTGCTGAATTTAATTGTTATCGAAAACAAAATACTACTTAATTATCTTCGGAAGAAATTATCACTTCAGTGGTAGGCTGCAACAGTTTGTTAGATCTCATGCAATTGATTCATTATGTAATTGGTCTTCCCCCCCCGGGAATGGCTAGGTTGTTAAGGAACTGGTTAAGCAAGTGATATACCCATGGAGTGCACATTTGGAAATGACATAAGCAATCACTAGTTTCTGCCTTGAATTTTTGTTCACTTGAATTAATAATTTGAGAAAGTGGCTCAACTACTGTTGTTGGAGAAATGTGGAAGTCTAGGTTTTGGTTGAATTTCTCTAGAAAGCTCAAGTCTAAAAAAACCAATCGTATTTTGTGGAGCGAAGAGGTAAATGACATACCCTTGAGGCGTTTCAATAGTTTCATTGATGGAAGTAAGCTGTTTGACCGTCCATTGCTGAATGGGAAGTTTGCGTGGGCTAATTGTATGGCTGCAACTAAGACTGGTAGATTTTTACTTTCAGAAGGTTGGATTAAGAGTTTGGTAGCCCTAGACAGTTGAGGGGGCCAAGATTCACCATCAAATCAACAACTGCTACTCCTCCTTTCAACCCTTCATCTTCATCTTCAGCTCCCAATCTCCTTCTCTTCTCTTTTTTCCTCATCAAAAGGCTCTCGAGGAAATCTAAAAAGAAAGAATTTTTCTAAGATCTTCCAACATTACTTCAAGCAATTTCTGAAGTATTTTATCCGGAAGAAAAAATCAAAGATTATGGAAAAATGTTCCTTAAAAGCCCAGATTTTAGATGATCAAGTACCCGTTTTGCTTGAGGAAAATACTGCCCATTCTATTTCATCAGCTTATTCCAGCAGCTCCAAGCTGTTTGTAGAGACTAATCATGATTTATTGGAAGTCAGTTGCACCCAAATTCAAGCCCCAGCCCGTTCTTCTAGGTCATTTTCTCATCATCCTCACTTTATCCAGTTTAAGTACTCTGAGTTCTCTCTGCCTAACTCCAAGGTTAAATTTCTGAAGGGCTCTCCAAGAAAAACCCCTCACAATCAATCCAACAAGAAGGGTGAGCATTTTTTCAACTCCCCTCTCAGTGTTTGTAGCGAGGAATTGGAGCATTTGGATAGGTAAACCGAACTTGAAAGTTAGAAACATTTGAGCCTCTAGAAACTGATCTCAATGCTCTGTTTCAATGCGAGGAATAGCTAGTATCCGCAAAGTTTCCTTCTGCTACTCGTTCTTGTCCTTGGTCTTGCAAAATACTAGATCATTTAAAATCAATAGTTGCTGATTGTGGATTTATTCTAATTTGATTCTTCAACAGTTTAATGTATTTCTCCTCTATGTAAGACTAACTTCAGTCATTCTTGGATTTCCCTTCATATGGGTGGCAAGTAAATTCTACATGCCGATGCTGAATAGTGAAATACTTTTTCGAGCTTCCTCTAGATTATGGATTAATTTGGTTAGGCAGCTGGTTGCATCTTCTTGAAAGGTTTTAGTTTCAATTTAGTTCTTTATGAGAGAATTTTGCATTATTCTTTGTAATTAGATTTCTTCAGATATGGTTTTGTTGAGCTTGATCTCTTCCTTTTGGAATTTGCATGACAAGTTTTACTTGGTCGTGTGAACATTATGGATAGGCTACTACAGTAGAAGAAGTTTTCGCTTATGAAGCCTTTTTGTTGTGTTCTTTATTGGAAGGCGGAGGAAGACCTATATCACCTTCTTTGGAATTGTTAGTTTGCTAGATCGGTGTGGAACTATTTCTTTCAAGAGTTCCATATTGAGCTAGCTTGCTAGAGAGTTGTTCGGGAGACGATCAAGGAGCTCATTCTTCATATGTCTTTCATTGAGAAATACTGTTTTTTATGGTCAGCTGAGGTGTGTGCTATTCTCTGAGATATTTTGGGGGAGAGGAATAATGTAGTGTTTAGGGGTGTGTGGAGAGAGACAATAATGATGTTTGGTTTTTGGGGAAGTTTCATGTTTATCTTTAAACTTCGGTCTCAAGTACTTTTTGTAATTAACTCCTGGGTAGCATCTTACTTAGTTGAGAACCCTTTCTTTAGAGGTGTTTTGTTGGTTTTTCTTTTTCTTGTATAATAATCCCCTTTCATGTATTTACTACTTTTTTTATCCCACGTAAATGGTAAACTAAAAAATCTTCAATGCTCTTTAATAATGAAAATAAAAAAGTTCGCTAGTCTGAGGGAAGAGTTGGCTCTCACTGATCTTTTATGGAATGCGAGGGGCTTCAAGTCTCTAGCCAGAAAATTAATGCTAAGTATACTTCTGATTTTGTCATTCTCACCAAAATTAGACAAAAAGGTTAATAGGTTGCTAAGGCTGGAGTTCTAGAAGTGTTGAATGGACTTCTTAAGATGATGTAGGTTCCTTTTGGTAGTATAGTCATTTTTCCTCCCCTCTTTCTTCTTTGGAAGGACTTGCTCTAGATGAAAGGTGTGCTCTTCCTCTATTTTGGTGGTTATCTTAAGGCTAATGGTGTTTGTTGGTGGATTTTAGGCATATGTCTTAGGCCCAGCTAACACGATGAGACAAGTTTTGAAGGGAATTATGTGACTTTCAAGTTATATCACTCAATGAAAGTTGTTTTCTTTTACAACAAAACTATTCTCTTTCAGCACTTCATTGAGTTGATTAAAGAATGATCACGGGTGAATAGCTCTGACTGTATTTTTACTGCGCGGGTCAACAAGTCCTCCCTTTCTTTTATTCCCAATACAAAAGGAATATATTGAGGAAGTATAGTTTTGATTATTGTTTAAAAATATGAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGCTGAATAATTTGCAAGCTACACATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTCTTGTCACGTGTTTTTATCTTTTTGTATCTTCTATAAACTCAGAAAATGTCATCTTGACATGCTTGTTGATTCTCCAGGTTTGCGATCAACCACATCCGCTGCATGTGAAGAATGTGGTACGCAATGTGCTTGAAGGTAAATTTGATGATGCTTGTACAGGCCTGAGGCAACTCTACGACTTAGGCTATTCCCCCACTGACATAATAACCACTCTTTTCCGAATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGTATTTTAAAACCCGAGGCATCATTTGATCATACCAGGTTAACCAAGTACTCACTCTTTTTGATGAATTGCAGGAAACTGGGTTTGCCCATATGAGAATCTGTGATGGTGTCGGTTCTTACCTTCAACTATGTGGTCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCACCATGAGTAGTCAACATGTAGAGGCTGCTTAAATTTGGCTCACAGGAGGTAGTATGAATGTAAACATCTGTGTTCCTTAGGATATTAACTATATTTTTGTAAGATGTAGTCAGATTGAGCTCAAAATTTATCACGTTACTTACTATATCGTCTTGCTAAAGTTTTAGGCCAATGGCAATCTTGTCAAGGTTTTCCTCCCCACCCCCACCCACCTAGTAATAGGTACAAACAAGCCTTAACATGCTCATTATTCACTATTGTTAAAAGCTTTTGGTTTCAAATGTCAAGCTCTAATGCTATGTTCTGTATTTTCGATATCTCAGTACATAGACACAAAGAATCAGGAGATAGACCTCATGTAAATTAATAATTACAGATTAGTTCATACAAAAGCATAGTTAAACTTGATAATCATCCAGATTTACATGGTTCAAAAACCACAATTTGCTTACTCACTGCATCGAACGCATTTTGCACATGTGCTGGGTGTTTTTTCAAAGACAAGGACACGTTATTGAAACTGAAGTGGC

mRNA sequence

CGGGAATTGGAAGGGCAAAGTTCTTCTTCCTGAATTCGTTCTACTCTCTCTCGAGCATCCCAATTCATCTGTTCGAACATTCTATGGCGTCTTCTTCAGGCAGCAGTAGCAACTACGACATTCCATGGGTGGAGAAGTACAGGCCCAACAAGGTCACCGACATTGTGGGTAATGAAGATGCAGTTTCTCGTCTCCAAGTCATTGCTCGGGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCAGGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCATGAGCTCTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGGGAATAGATGTCGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACATTGCCTCCTGGTCGACACAAAGTGGTAATATTGGATGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATTTATTCAAACACAACACGTTTTGCCCTTGCATGTAATACCTCCTCAAAAATTATTGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGATTCAGGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGCTGAATAATTTGCAAGCTACACATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTTGCGATCAACCACATCCGCTGCATGTGAAGAATGTGGTACGCAATGTGCTTGAAGGTAAATTTGATGATGCTTGTACAGGCCTGAGGCAACTCTACGACTTAGGCTATTCCCCCACTGACATAATAACCACTCTTTTCCGAATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATATGAGAATCTGTGATGGTGTCGGTTCTTACCTTCAACTATGTGGTCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCACCATGAGTAGTCAACATGTAGAGGCTGCTTAAATTTGGCTCACAGGAGGTAGTATGAATGTAAACATCTGTGTTCCTTAGGATATTAACTATATTTTTGTAAGATGTAGTCAGATTGAGCTCAAAATTTATCACGTTACTTACTATATCGTCTTGCTAAAGTTTTAGGCCAATGGCAATCTTGTCAAGGTTTTCCTCCCCACCCCCACCCACCTAGTAATAGGTACAAACAAGCCTTAACATGCTCATTATTCACTATTGTTAAAAGCTTTTGGTTTCAAATGTCAAGCTCTAATGCTATGTTCTGTATTTTCGATATCTCAGTACATAGACACAAAGAATCAGGAGATAGACCTCATGTAAATTAATAATTACAGATTAGTTCATACAAAAGCATAGTTAAACTTGATAATCATCCAGATTTACATGGTTCAAAAACCACAATTTGCTTACTCACTGCATCGAACGCATTTTGCACATGTGCTGGGTGTTTTTTCAAAGACAAGGACACGTTATTGAAACTGAAGTGGC

Coding sequence (CDS)

ATGGCGTCTTCTTCAGGCAGCAGTAGCAACTACGACATTCCATGGGTGGAGAAGTACAGGCCCAACAAGGTCACCGACATTGTGGGTAATGAAGATGCAGTTTCTCGTCTCCAAGTCATTGCTCGGGACGGCAACATGCCCAATCTCATATTATCTGGTCCGCCAGGAACTGGGAAGACAACCAGTATTTTGGCTCTTGCTCATGAGCTCTTGGGACCAAATTACAAGGAGGGTGTTCTGGAGCTTAATGCATCAGATGATAGGGGAATAGATGTCGTGAGGAACAAAATCAAGATGTTTGCTCAAAAGAAAGTAACATTGCCTCCTGGTCGACACAAAGTGGTAATATTGGATGAAGCTGACAGCATGACAACTGGAGCACAACAAGCTTTGAGGCGTACAATGGAAATTTATTCAAACACAACACGTTTTGCCCTTGCATGTAATACCTCCTCAAAAATTATTGAGCCTATTCAGAGTAGATGTGCAATTGTCCGATTTTCAAGATTAACAGATCAAGAGATTCTTGGGCGCCTTATGGTGGTGATTCAGGCAGAAAAGGTACCCTATGTTCCAGAAGGTCTTGAAGCAATCATTTTCACTGCTGATGGTGATATGAGGCAGGCGCTGAATAATTTGCAAGCTACACATAGTGGATTCCGCTTTGTAAACCAGGACAATGTTTTCAAGGTTTGCGATCAACCACATCCGCTGCATGTGAAGAATGTGGTACGCAATGTGCTTGAAGGTAAATTTGATGATGCTTGTACAGGCCTGAGGCAACTCTACGACTTAGGCTATTCCCCCACTGACATAATAACCACTCTTTTCCGAATCATTAAGAACTACGATATGGCCGAATATCTGAAACTGGAATTCATGAAGGAAACTGGGTTTGCCCATATGAGAATCTGTGATGGTGTCGGTTCTTACCTTCAACTATGTGGTCTTTTGGCCAAGCTTTCCATGGTTCGTGAGACTGCAAAAGCACCATGA

Protein sequence

MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSMVRETAKAP*

Homology

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BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot
Match: Q9CAM7 (Replication factor C subunit 2 OS=Arabidopsis thaliana OX=3702 GN=RFC2 PE=1 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 1.2e-172
Identity = 302/333 (90.69%), Postives = 319/333 (95.80%), Query Frame = 0


Query: 1   MASSSGSSS--NYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 60
           MASSS +S+   Y+ PWVEKYRP+KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG
Sbjct: 1   MASSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 60

Query: 61  KTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120
           KTTSILALAHELLG NYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
Sbjct: 61  KTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120

Query: 121 EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGR 180
           EADSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGR
Sbjct: 121 EADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGR 180

Query: 181 LMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPL 240
           L+VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ+NVFKVCDQPHPL
Sbjct: 181 LLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPL 240

Query: 241 HVKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 300
           HVKN+VRNVLE KFD AC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
Sbjct: 241 HVKNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 300

Query: 301 FAHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 332
           FAHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 FAHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

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BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot
Match: Q7XRX1 (Replication factor C subunit 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC4 PE=2 SV=2)

HSP 1 Score: 584.7 bits (1506), Expect = 6.5e-166
Identity = 287/332 (86.45%), Postives = 313/332 (94.28%), Query Frame = 0


Query: 2   ASSSGS---SSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 61
           ASSS +   +  YDIPWVEKYRP +V D+ GN DAV+RLQ IARDGNMPNLILSGPPGTG
Sbjct: 3   ASSSSAPDLADAYDIPWVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTG 62

Query: 62  KTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 121
           KTTSIL+LAHELLGP+Y+E VLELNASDDRG+DVVRNKIKMFAQKKVTL PGRHK+VILD
Sbjct: 63  KTTSILSLAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILD 122

Query: 122 EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGR 181
           EADSMT+GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRL+DQEILGR
Sbjct: 123 EADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGR 182

Query: 182 LMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPL 241
           LM+V+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQ+NVFKVCDQPHPL
Sbjct: 183 LMIVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPL 242

Query: 242 HVKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 301
           HVKN+V+NVL+GKFD+AC+ L+QLYDLGYSPTDIITTLFR+IKNYDMAEYLKLE +KETG
Sbjct: 243 HVKNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETG 302

Query: 302 FAHMRICDGVGSYLQLCGLLAKLSMVRETAKA 331
           FAHMRICDGVGS+LQL GLLAK ++VRETAKA
Sbjct: 303 FAHMRICDGVGSFLQLSGLLAKFALVRETAKA 334

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BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot
Match: Q05B83 (Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 2.0e-127
Identity = 218/320 (68.12%), Postives = 267/320 (83.44%), Query Frame = 0


Query: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61
           + + GS+ +Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTT
Sbjct: 23  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 82

Query: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121
           SIL LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 83  SILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 142

Query: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RL+ 
Sbjct: 143 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDMQILARLLS 202

Query: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVK 241
           VI+ EKV Y  +GLEAIIFTA GDMRQALNNLQ+T+SGF F+N +NVFKVCD+PHPL VK
Sbjct: 203 VIEKEKVQYTDDGLEAIIFTAQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVK 262

Query: 242 NVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301
            ++++ +    D+A   L  L+ LGYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 263 EMIQHCVSADIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 322

Query: 302 MRICDGVGSYLQLCGLLAKL 322
           M+I +GV S LQ+ GLLA+L
Sbjct: 323 MKIAEGVNSLLQMAGLLARL 342

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BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot
Match: P35250 (Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3)

HSP 1 Score: 456.4 bits (1173), Expect = 2.7e-127
Identity = 218/320 (68.12%), Postives = 267/320 (83.44%), Query Frame = 0


Query: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61
           + + GS+ +Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTT
Sbjct: 25  SKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTT 84

Query: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121
           SIL LA  LLGP  K+ +LELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEAD
Sbjct: 85  SILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEAD 144

Query: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181
           SMT GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD +IL RLM 
Sbjct: 145 SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMN 204

Query: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVK 241
           VI+ E+VPY  +GLEAIIFTA GDMRQALNNLQ+T SGF F+N +NVFKVCD+PHPL VK
Sbjct: 205 VIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVK 264

Query: 242 NVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301
            ++++ +    D+A   L  L+ LGYSP DII  +FR+ K + MAEYLKLEF+KE G+ H
Sbjct: 265 EMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTH 324

Query: 302 MRICDGVGSYLQLCGLLAKL 322
           M+I +GV S LQ+ GLLA+L
Sbjct: 325 MKIAEGVNSLLQMAGLLARL 344

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BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot
Match: Q641W4 (Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 7.8e-127
Identity = 215/317 (67.82%), Postives = 266/317 (83.91%), Query Frame = 0


Query: 5   SGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSIL 64
           S ++ +Y++PWVEKYRP K+ +IVGNED VSRL+V AR+GN+PN+I++GPPGTGKTTSIL
Sbjct: 23  SKTTGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSIL 82

Query: 65  ALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMT 124
            LA  LLGP  K+ VLELNAS+DRGIDVVRNKIKMFAQ+KVTLP GRHK++ILDEADSMT
Sbjct: 83  CLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMT 142

Query: 125 TGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQ 184
            GAQQALRRTMEIYS TTRFALACN S KIIEPIQSRCA++R+++LTD ++L RLM VI+
Sbjct: 143 DGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLMNVIE 202

Query: 185 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVV 244
            EKVPY  +GLEAIIFTA GDMRQALNNLQ+T SGF ++N +NVFKVCD+PHPL VK ++
Sbjct: 203 KEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPHPLLVKEMI 262

Query: 245 RNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRI 304
           ++ ++   D+A   L  L+ LGYSP D+I  +FR+ K + MAEYLKLEF+KE G+ HM++
Sbjct: 263 QHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFPMAEYLKLEFIKEIGYTHMKV 322

Query: 305 CDGVGSYLQLCGLLAKL 322
            +GV S LQ+ GLLA+L
Sbjct: 323 AEGVNSLLQMAGLLARL 339

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BLAST of CsGy3G003450 vs. NCBI nr
Match: XP_004147970.1 (replication factor C subunit 2 [Cucumis sativus] >KGN55951.1 hypothetical protein Csa_010919 [Cucumis sativus])

HSP 1 Score: 659 bits (1699), Expect = 1.69e-238
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CsGy3G003450 vs. NCBI nr
Match: XP_008448956.1 (PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo])

HSP 1 Score: 653 bits (1685), Expect = 2.31e-236
Identity = 328/331 (99.09%), Postives = 330/331 (99.70%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CsGy3G003450 vs. NCBI nr
Match: XP_038905731.1 (replication factor C subunit 2 [Benincasa hispida])

HSP 1 Score: 642 bits (1656), Expect = 6.08e-232
Identity = 321/331 (96.98%), Postives = 328/331 (99.09%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSS+YD+PWVEKYRP+ V DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSSYDMPWVEKYRPSTVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK+VILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKMVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VV+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CsGy3G003450 vs. NCBI nr
Match: XP_022152824.1 (replication factor C subunit 2 [Momordica charantia])

HSP 1 Score: 639 bits (1648), Expect = 1.05e-230
Identity = 319/330 (96.67%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61
           +SSSG+SS+YD+PWVEK+RP KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 3   SSSSGNSSSYDMPWVEKFRPTKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62

Query: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121
           SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 63  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122

Query: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182

Query: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVK 241
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVK
Sbjct: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242

Query: 242 NVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301
           NVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302

Query: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           MRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 303 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 332

[Close]

BLAST of CsGy3G003450 vs. NCBI nr
Match: TYK19440.1 (replication factor C subunit 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 639 bits (1647), Expect = 5.47e-230
Identity = 321/324 (99.07%), Postives = 323/324 (99.69%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMV 324
           HMRICDGVGSYLQLCGLLAKLSMV
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMV 324

[Close]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL
Match: A0A0A0L763 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038730 PE=3 SV=1)

HSP 1 Score: 659 bits (1699), Expect = 8.21e-239
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL
Match: A0A1S3BLV0 (replication factor C subunit 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490969 PE=3 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 1.12e-236
Identity = 328/331 (99.09%), Postives = 330/331 (99.70%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           HMRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMVRETAKAP 331

[Close]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL
Match: A0A6J1DH57 (replication factor C subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020446 PE=3 SV=1)

HSP 1 Score: 639 bits (1648), Expect = 5.07e-231
Identity = 319/330 (96.67%), Postives = 327/330 (99.09%), Query Frame = 0


Query: 2   ASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 61
           +SSSG+SS+YD+PWVEK+RP KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
Sbjct: 3   SSSSGNSSSYDMPWVEKFRPTKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT 62

Query: 62  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 121
           SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD
Sbjct: 63  SILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEAD 122

Query: 122 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 181
           SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV
Sbjct: 123 SMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMV 182

Query: 182 VIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVK 241
           V+QAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHVK
Sbjct: 183 VLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVK 242

Query: 242 NVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 301
           NVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
Sbjct: 243 NVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH 302

Query: 302 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 331
           MRICDGVGSYLQLCGLLAKLSMVRETAKAP
Sbjct: 303 MRICDGVGSYLQLCGLLAKLSMVRETAKAP 332

[Close]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL
Match: A0A5D3D7L4 (Replication factor C subunit 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00910 PE=3 SV=1)

HSP 1 Score: 639 bits (1647), Expect = 2.65e-230
Identity = 321/324 (99.07%), Postives = 323/324 (99.69%), Query Frame = 0


Query: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60
           MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT
Sbjct: 1   MASSSGSSSNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKT 60

Query: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120
           TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA
Sbjct: 61  TSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEA 120

Query: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180
           DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM
Sbjct: 121 DSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLM 180

Query: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHV 240
           VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQDNVFKVCDQPHPLHV
Sbjct: 181 VVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHV 240

Query: 241 KNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300
           KNVVRNVLEGKFDDAC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
Sbjct: 241 KNVVRNVLEGKFDDACAGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA 300

Query: 301 HMRICDGVGSYLQLCGLLAKLSMV 324
           HMRICDGVGSYLQLCGLLAKLSMV
Sbjct: 301 HMRICDGVGSYLQLCGLLAKLSMV 324

[Close]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL
Match: A0A803R8Y5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 1.89e-226
Identity = 312/331 (94.26%), Postives = 326/331 (98.49%), Query Frame = 0


Query: 1   MASSSGSS-SNYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK 60
           MASSS SS SNYDIPWVEKYRPNKV DIVGNEDAVSRLQVIARDGNMPN+ILSGPPGTGK
Sbjct: 1   MASSSSSSLSNYDIPWVEKYRPNKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPPGTGK 60

Query: 61  TTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120
           TTSILALAHELLGPNY+EGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
Sbjct: 61  TTSILALAHELLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE 120

Query: 121 ADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRL 180
           ADSMT+GAQQALRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQ+ILGRL
Sbjct: 121 ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRL 180

Query: 181 MVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLH 240
           MVV++AEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQ+NVFKVCDQPHPLH
Sbjct: 181 MVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQENVFKVCDQPHPLH 240

Query: 241 VKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF 300
           VKN+VRNVLEGKFDDAC GL+QLYDLGYSPTDIITT+FRIIKNYDMAEYLKLEFMKETGF
Sbjct: 241 VKNIVRNVLEGKFDDACFGLKQLYDLGYSPTDIITTIFRIIKNYDMAEYLKLEFMKETGF 300

Query: 301 AHMRICDGVGSYLQLCGLLAKLSMVRETAKA 330
           AHMRICDGVGSYLQLCGLLAKLSM RETA+A
Sbjct: 301 AHMRICDGVGSYLQLCGLLAKLSMARETARA 331

[Close]

BLAST of CsGy3G003450 vs. TAIR 10
Match: AT1G63160.1 (replication factor C 2 )

HSP 1 Score: 607.1 bits (1564), Expect = 8.7e-174
Identity = 302/333 (90.69%), Postives = 319/333 (95.80%), Query Frame = 0


Query: 1   MASSSGSSS--NYDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 60
           MASSS +S+   Y+ PWVEKYRP+KV DIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG
Sbjct: 1   MASSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG 60

Query: 61  KTTSILALAHELLGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120
           KTTSILALAHELLG NYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
Sbjct: 61  KTTSILALAHELLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120

Query: 121 EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGR 180
           EADSMT+GAQQALRRT+EIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRL+DQ+ILGR
Sbjct: 121 EADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGR 180

Query: 181 LMVVIQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPL 240
           L+VV+ AEKVPYVPEGLEAIIFTADGDMRQALNNLQAT SGF FVNQ+NVFKVCDQPHPL
Sbjct: 181 LLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPL 240

Query: 241 HVKNVVRNVLEGKFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 300
           HVKN+VRNVLE KFD AC GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
Sbjct: 241 HVKNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG 300

Query: 301 FAHMRICDGVGSYLQLCGLLAKLSMVRETAKAP 332
           FAHMRICDGVGSYLQLCGLLAKLS+VRETAKAP
Sbjct: 301 FAHMRICDGVGSYLQLCGLLAKLSIVRETAKAP 333

[Close]

BLAST of CsGy3G003450 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-54
Identity = 118/322 (36.65%), Postives = 185/322 (57.45%), Query Frame = 0


Query: 14  PWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 73
           PWVEKYRP  + D+  + D +  +  +  +  +P+L+L GPPGTGKT++ILA+A +L GP
Sbjct: 40  PWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGP 99

Query: 74  NYKEGVLELNASDDRGIDVVRNKIKMFAQ-KKVTLPPGRHKVVILDEADSMTTGAQQALR 133
            Y+  +LELNASDDRGIDVVR +I+ FA  +  +L     K+V+LDEAD+MT  AQ ALR
Sbjct: 100 KYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALR 159

Query: 134 RTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPYVP 193
           R +E Y+ +TRFAL  N  +KII  +QSRC   RF+ L    +  RL  VI+AE++    
Sbjct: 160 RVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSD 219

Query: 194 EGLEAIIFTADGDMRQALNNLQATHSG--------FRFVNQDNVFKVCDQPHPLHVKNVV 253
            GL A++  ++GDMR+ALN LQ+TH           + + +++V+     P P  ++ + 
Sbjct: 220 CGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQIS 279

Query: 254 RNVLEGKFDDACTGLRQLYD-LGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMR 313
             +L   FD+    + ++    G +  DI+  +   I    M   ++++ + +      R
Sbjct: 280 HWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYR 339

Query: 314 ICDGVGSYLQLCGLLAKLSMVR 326
           +  G    LQL  +++  +  R
Sbjct: 340 LSFGCNDKLQLGAIISTFTHAR 361

[Close]

BLAST of CsGy3G003450 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-54
Identity = 127/312 (40.71%), Postives = 170/312 (54.49%), Query Frame = 0


Query: 14  PWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 73
           PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L GP
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 74  N-YKEGVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTT 133
             YK  VLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT 
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 134 GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQA 193
            AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 194 EKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVR 253
           E +    E L  +   + GD+R+A+  LQ+    F                PL V N + 
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLF 249

Query: 254 NVLE-GKFDDACTGLRQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHM 313
              + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDK 309

Query: 314 RICDGVGSYLQL 315
           R+ DG   YLQL
Sbjct: 310 RLVDGADEYLQL 321

[Close]

BLAST of CsGy3G003450 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-51
Identity = 124/311 (39.87%), Postives = 167/311 (53.70%), Query Frame = 0


Query: 14  PWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 73
           PWVEKYRP +V D+   E+ V  L    +  + P+++  GPPGTGKTT+ LA+AH+L   
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLF-- 69

Query: 74  NYKEGVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTTG 133
               GVLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT  
Sbjct: 70  ----GVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTED 129

Query: 134 AQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAE 193
           AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   E
Sbjct: 130 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 189

Query: 194 KVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRN 253
            +    E L  +   + GD+R+A+  LQ+    F                PL V N +  
Sbjct: 190 GLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFT 249

Query: 254 VLE-GKFDDACTGLRQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHMR 313
             + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       R
Sbjct: 250 ACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDKR 309

Query: 314 ICDGVGSYLQL 315
           + DG   YLQL
Sbjct: 310 LVDGADEYLQL 314

[Close]

BLAST of CsGy3G003450 vs. TAIR 10
Match: AT1G21690.2 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-51
Identity = 125/312 (40.06%), Postives = 166/312 (53.21%), Query Frame = 0


Query: 14  PWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGP 73
           PWVEKYRP +V D+   E+              P+++  GPPGTGKTT+ LA+AH+L GP
Sbjct: 10  PWVEKYRPKQVKDVAHQEEV------------CPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 74  N-YKEGVLELNASDDRGIDVVRNKIKMFA-------QKKVTLPPGRHKVVILDEADSMTT 133
             YK  VLELNASDDRGI+VVR KIK FA        ++   P    K++ILDEADSMT 
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 134 GAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQA 193
            AQ ALRRTME YS  TRF   CN  S+IIEP+ SRCA  RF  L+++ +  R++ +   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 194 EKVPYVPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVR 253
           E +    E L  +   + GD+R+A+  LQ+    F                PL V N + 
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLF 249

Query: 254 NVLE-GKFDDACTGLRQLYDLGYSPTDIITTLFRII--KNYDMAEYLKLEFMKETGFAHM 313
              + G FD A   +  +   GY  + II  LF I+   + D+ +  K +  K       
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDK 309

Query: 314 RICDGVGSYLQL 315
           R+ DG   YLQL
Sbjct: 310 RLVDGADEYLQL 309

The following BLAST results are available for this feature:

BLAST of CsGy3G003450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAM7	1.2e-172	90.69	Replication factor C subunit 2 OS=Arabidopsis thaliana OX=3702 GN=RFC2 PE=1 SV=1	[more]
Q7XRX1	6.5e-166	86.45	Replication factor C subunit 4 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC4 ...	[more]
Q05B83	2.0e-127	68.13	Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1	[more]
P35250	2.7e-127	68.13	Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3	[more]
Q641W4	7.8e-127	67.82	Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1	[more]

BLAST of CsGy3G003450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147970.1	1.69e-238	100.00	replication factor C subunit 2 [Cucumis sativus] >KGN55951.1 hypothetical protei...	[more]
XP_008448956.1	2.31e-236	99.09	PREDICTED: replication factor C subunit 2 isoform X1 [Cucumis melo]	[more]
XP_038905731.1	6.08e-232	96.98	replication factor C subunit 2 [Benincasa hispida]	[more]
XP_022152824.1	1.05e-230	96.67	replication factor C subunit 2 [Momordica charantia]	[more]
TYK19440.1	5.47e-230	99.07	replication factor C subunit 2 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G003450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L763	8.21e-239	100.00	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038730 PE=3 SV...	[more]
A0A1S3BLV0	1.12e-236	99.09	replication factor C subunit 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349096...	[more]
A0A6J1DH57	5.07e-231	96.67	replication factor C subunit 2 OS=Momordica charantia OX=3673 GN=LOC111020446 PE...	[more]
A0A5D3D7L4	2.65e-230	99.07	Replication factor C subunit 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A803R8Y5	1.89e-226	94.26	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of CsGy3G003450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63160.1	8.7e-174	90.69	replication factor C 2	[more]
AT1G77470.1	1.4e-54	36.65	replication factor C subunit 3	[more]
AT1G21690.1	3.1e-54	40.71	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	1.1e-51	39.87	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.2	1.4e-51	40.06	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 45..177 e-value: 5.6E-13 score: 59.1
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 235..320 e-value: 1.3E-20 score: 73.6
None	No IPR available	GENE3D	1.10.8.60		coord: 171..234 e-value: 5.3E-21 score: 75.9
None	No IPR available	GENE3D	1.20.272.10		coord: 235..327 e-value: 6.5E-30 score: 104.9
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 6..329
None	No IPR available	PANTHER	PTHR11669:SF5	REPLICATION FACTOR C SUBUNIT 2	coord: 6..329
None	No IPR available	CDD	cd00009	AAA	coord: 28..165 e-value: 5.94714E-26 score: 99.1427
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 170..232 e-value: 7.38875E-20 score: 79.8805
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..170 e-value: 2.4E-57 score: 195.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..233
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 49..167 e-value: 9.7E-15 score: 55.2
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 234..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G003450.2	CsGy3G003450.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity