CsGy3G002750 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCAAACTCCTTCTATAAAAGCCCTAAATTCTCTCATTATTATTCACCCATTGGTAGCCATTACAAACCATAAAAAAACTCCCTTCAATATCATTATTCCTCTCCAAATGGCTTCCAAAATTTCATCAACCACTTCCCTTCTCCTTCTTCTCAACCTCCTCTTCTTCACTATGGTCACCTCCACCTACGTCCCTTGCCCGCCGCCGCCACAGAAGCACCCCAAGGGCGTTCCCTCGAAGCAGCCAACACCACAGCCAAAGTGCCCAAAGGACACTCTCAAGCTCGGCGTTTGCGCTGACTTGCTCGATGGTCTAGTGCACGTCGTGATCGGCGCACCACCGAAAACCCCATGTTGCACACTAATCCAGGACTTAGTTGATCTTGAAGCTGCTCTTTGTCTTTGTACCGCGGTTAAAGCAAAGGCCTTAGGGCTCAAAATTGACCTCTCAGTTTCCCTCAGCTTGCTCTTGAACTATTGTGGAAAGAAGGTTCCAAATGGCTTCAAATGCCCTGCTTAAGATGTCACTCTCTTGCCACAACAATCTTACTTAACTATCCTTTTCATAATTTTCACCTATGTTTTGTTCTTGATATTTTCCAATTTGGGTTATGTTATATTGTGTGTTTGAAGGCTATGTTTGGTCACTATGAAATGTCGTTTCTGTTGTACTGATGGGTTTGGAAATCTTCTAAGAATTATCCCACCATCATCTTCTATAGGCTTTTCACTATAGAAATGTTATTGTGTTTGTGTAATATAAAAATATATAGATACACGTAGTTTTTTGG TCTCAAACTCCTTCTATAAAAGCCCTAAATTCTCTCATTATTATTCACCCATTGGTAGCCATTACAAACCATAAAAAAACTCCCTTCAATATCATTATTCCTCTCCAAATGGCTTCCAAAATTTCATCAACCACTTCCCTTCTCCTTCTTCTCAACCTCCTCTTCTTCACTATGGTCACCTCCACCTACGTCCCTTGCCCGCCGCCGCCACAGAAGCACCCCAAGGGCGTTCCCTCGAAGCAGCCAACACCACAGCCAAAGTGCCCAAAGGACACTCTCAAGCTCGGCGTTTGCGCTGACTTGCTCGATGGTCTAGTGCACGTCGTGATCGGCGCACCACCGAAAACCCCATGTTGCACACTAATCCAGGACTTAGTTGATCTTGAAGCTGCTCTTTGTCTTTGTACCGCGGTTAAAGCAAAGGCCTTAGGGCTCAAAATTGACCTCTCAGTTTCCCTCAGCTTGCTCTTGAACTATTGTGGAAAGAAGGTTCCAAATGGCTTCAAATGCCCTGCTTAAGATGTCACTCTCTTGCCACAACAATCTTACTTAACTATCCTTTTCATAATTTTCACCTATGTTTTGTTCTTGATATTTTCCAATTTGGGTTATGTTATATTGTGTGTTTGAAGGCTATGTTTGGTCACTATGAAATGTCGTTTCTGTTGTACTGATGGGTTTGGAAATCTTCTAAGAATTATCCCACCATCATCTTCTATAGGCTTTTCACTATAGAAATGTTATTGTGTTTGTGTAATATAAAAATATATAGATACACGTAGTTTTTTGG ATGGCTTCCAAAATTTCATCAACCACTTCCCTTCTCCTTCTTCTCAACCTCCTCTTCTTCACTATGGTCACCTCCACCTACGTCCCTTGCCCGCCGCCGCCACAGAAGCACCCCAAGGGCGTTCCCTCGAAGCAGCCAACACCACAGCCAAAGTGCCCAAAGGACACTCTCAAGCTCGGCGTTTGCGCTGACTTGCTCGATGGTCTAGTGCACGTCGTGATCGGCGCACCACCGAAAACCCCATGTTGCACACTAATCCAGGACTTAGTTGATCTTGAAGCTGCTCTTTGTCTTTGTACCGCGGTTAAAGCAAAGGCCTTAGGGCTCAAAATTGACCTCTCAGTTTCCCTCAGCTTGCTCTTGAACTATTGTGGAAAGAAGGTTCCAAATGGCTTCAAATGCCCTGCTTAA MASKISSTTSLLLLLNLLFFTMVTSTYVPCPPPPQKHPKGVPSKQPTPQPKCPKDTLKLGVCADLLDGLVHVVIGAPPKTPCCTLIQDLVDLEAALCLCTAVKAKALGLKIDLSVSLSLLLNYCGKKVPNGFKCPA* Homology
BLAST of CsGy3G002750 vs. ExPASy Swiss-Prot
Match: P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-34 Identity = 76/137 (55.47%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy Swiss-Prot
Match: Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28 Identity = 67/167 (40.12%), Postives = 97/167 (58.08%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy Swiss-Prot
Match: Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27 Identity = 68/162 (41.98%), Postives = 100/162 (61.73%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy Swiss-Prot
Match: Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.6e-25 Identity = 70/176 (39.77%), Postives = 98/176 (55.68%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy Swiss-Prot
Match: Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.7e-25 Identity = 71/181 (39.23%), Postives = 98/181 (54.14%), Query Frame = 0
BLAST of CsGy3G002750 vs. NCBI nr
Match: XP_004147199.1 (14 kDa proline-rich protein DC2.15 [Cucumis sativus]) HSP 1 Score: 270 bits (691), Expect = 2.61e-91 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CsGy3G002750 vs. NCBI nr
Match: KAE8650064.1 (hypothetical protein Csa_010277 [Cucumis sativus]) HSP 1 Score: 270 bits (691), Expect = 5.51e-91 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CsGy3G002750 vs. NCBI nr
Match: XP_008448867.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo] >KAA0041098.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa] >TYK11540.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa]) HSP 1 Score: 262 bits (670), Expect = 4.16e-88 Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CsGy3G002750 vs. NCBI nr
Match: XP_038905266.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida]) HSP 1 Score: 246 bits (629), Expect = 7.45e-82 Identity = 121/136 (88.97%), Postives = 127/136 (93.38%), Query Frame = 0
BLAST of CsGy3G002750 vs. NCBI nr
Match: XP_022944278.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata]) HSP 1 Score: 229 bits (585), Expect = 3.81e-75 Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy TrEMBL
Match: A0A0A0L2A4 (Proline-rich protein DC2.15 OS=Cucumis sativus OX=3659 GN=Csa_3G021150 PE=3 SV=1) HSP 1 Score: 270 bits (691), Expect = 1.26e-91 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy TrEMBL
Match: A0A5A7TDQ2 (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold61866G00010 PE=3 SV=1) HSP 1 Score: 262 bits (670), Expect = 2.02e-88 Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy TrEMBL
Match: A0A1S3BKP9 (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103490901 PE=3 SV=1) HSP 1 Score: 262 bits (670), Expect = 2.02e-88 Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy TrEMBL
Match: A0A6J1FXW6 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111448770 PE=3 SV=1) HSP 1 Score: 229 bits (585), Expect = 1.84e-75 Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 0
BLAST of CsGy3G002750 vs. ExPASy TrEMBL
Match: A0A6J1FYL5 (14 kDa proline-rich protein DC2.15-like OS=Cucurbita moschata OX=3662 GN=LOC111448805 PE=3 SV=1) HSP 1 Score: 229 bits (583), Expect = 3.72e-75 Identity = 113/136 (83.09%), Postives = 126/136 (92.65%), Query Frame = 0
BLAST of CsGy3G002750 vs. TAIR 10
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 164.9 bits (416), Expect = 4.7e-41 Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of CsGy3G002750 vs. TAIR 10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 145.2 bits (365), Expect = 3.9e-35 Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = 0
BLAST of CsGy3G002750 vs. TAIR 10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 3.6e-33 Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of CsGy3G002750 vs. TAIR 10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 3.6e-33 Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of CsGy3G002750 vs. TAIR 10
Match: AT5G46900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32 Identity = 71/128 (55.47%), Postives = 97/128 (75.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|