CsGy3G001980 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGGTTCGTTAATCGTTAGTTAGTCCTTCATCTTTTTCCATTTTGGATTCAGGGATTTTTGTATATCAAGGGTTTGACACTGAACAATCTTGTAATGGATTTTTTTTTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG MDSSNPTAALTKPCFLPSSSAADDDMEPGISSHTFFSRTYRSRSSRFDDPLPLPHFLDSCFLCRKPLGNNTDIFMYRGDTPFCSEECRQEQIEIDEMKEKKWRRSSAAAVKALRNKKDQQRRRSTSPNKSSPPSEYPFCAGTVAAA* Homology
BLAST of CsGy3G001980 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-23 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09 Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of CsGy3G001980 vs. NCBI nr
Match: XP_004147248.1 (FCS-Like Zinc finger 2 [Cucumis sativus] >KGN55805.1 hypothetical protein Csa_011069 [Cucumis sativus]) HSP 1 Score: 297 bits (760), Expect = 1.65e-101 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy3G001980 vs. NCBI nr
Match: XP_008448751.1 (PREDICTED: uncharacterized protein LOC103490823 [Cucumis melo] >KAA0063123.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 284 bits (726), Expect = 2.53e-96 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CsGy3G001980 vs. NCBI nr
Match: XP_038903293.1 (FCS-Like Zinc finger 2-like [Benincasa hispida]) HSP 1 Score: 226 bits (577), Expect = 1.50e-73 Identity = 126/157 (80.25%), Postives = 131/157 (83.44%), Query Frame = 0
BLAST of CsGy3G001980 vs. NCBI nr
Match: XP_023552761.1 (uncharacterized protein LOC111810300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201 bits (511), Expect = 2.20e-63 Identity = 114/162 (70.37%), Postives = 122/162 (75.31%), Query Frame = 0
BLAST of CsGy3G001980 vs. NCBI nr
Match: KAG7030182.1 (hypothetical protein SDJN02_08529 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199 bits (507), Expect = 6.45e-63 Identity = 111/154 (72.08%), Postives = 119/154 (77.27%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy TrEMBL
Match: A0A0A0L1D2 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G016990 PE=3 SV=1) HSP 1 Score: 297 bits (760), Expect = 7.99e-102 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy TrEMBL
Match: A0A5A7V4X5 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18110G00010 PE=3 SV=1) HSP 1 Score: 284 bits (726), Expect = 1.23e-96 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy TrEMBL
Match: A0A1S3BKF4 (uncharacterized protein LOC103490823 OS=Cucumis melo OX=3656 GN=LOC103490823 PE=3 SV=1) HSP 1 Score: 284 bits (726), Expect = 1.23e-96 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy TrEMBL
Match: A0A6J1E6I6 (uncharacterized protein LOC111431226 OS=Cucurbita moschata OX=3662 GN=LOC111431226 PE=3 SV=1) HSP 1 Score: 196 bits (497), Expect = 1.39e-61 Identity = 111/161 (68.94%), Postives = 119/161 (73.91%), Query Frame = 0
BLAST of CsGy3G001980 vs. ExPASy TrEMBL
Match: A0A6J1HL26 (uncharacterized protein LOC111465132 OS=Cucurbita maxima OX=3661 GN=LOC111465132 PE=3 SV=1) HSP 1 Score: 195 bits (495), Expect = 2.81e-61 Identity = 110/161 (68.32%), Postives = 119/161 (73.91%), Query Frame = 0
BLAST of CsGy3G001980 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsGy3G001980 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of CsGy3G001980 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 89.0 bits (219), Expect = 3.5e-18 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CsGy3G001980 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.2e-11 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of CsGy3G001980 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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