CsGy3G000080 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G000080
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 115936 .. 116551 (+)
RNA-Seq ExpressionCsGy3G000080
SyntenyCsGy3G000080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACATATAAATATATATATATTCCATTTGCACATATAAATAACGATATCCTGCGTGAAGTTGGGTTAAACTTTTCAAAGCATTTCTTTTCAGACGAGACAGACAACCGGCGGAAGCCACCAAAAAAGAAGATTATATTCCGGATCGATTTTTCAATATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAATTTTCTAGCTTTTTTTCTTCTTTTCTTTATCGCATCCCATATGGTATATTATATTATTACTGGCGATGGTTTAATCCTTTCCTACACAATCAATTGAACATACTTCTTCACCTTACTCC

mRNA sequence

TCCACATATAAATATATATATATTCCATTTGCACATATAAATAACGATATCCTGCGTGAAGTTGGGTTAAACTTTTCAAAGCATTTCTTTTCAGACGAGACAGACAACCGGCGGAAGCCACCAAAAAAGAAGATTATATTCCGGATCGATTTTTCAATATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAATTTTCTAGCTTTTTTTCTTCTTTTCTTTATCGCATCCCATATGGTATATTATATTATTACTGGCGATGGTTTAATCCTTTCCTACACAATCAATTGAACATACTTCTTCACCTTACTCC

Coding sequence (CDS)

ATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAA

Protein sequence

MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF*
Homology
BLAST of CsGy3G000080 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus])

HSP 1 Score: 212 bits (540), Expect = 4.74e-69
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112
           KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112

BLAST of CsGy3G000080 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 4.01e-59
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERI RR RRSCRGFRLTSRRLSVSKL+SKFGWLLRILN WRRSIV+IKK G SS
Sbjct: 1   MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSS-FSTPPSTIPTHTF 112
           KGSSNS AQA +LRSFRRSNSFYAEAIADCLDFIKT+SS FSTPPSTIPTHTF
Sbjct: 61  KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKTSSSSFSTPPSTIPTHTF 113

BLAST of CsGy3G000080 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110 bits (274), Expect = 2.96e-28
Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0

Query: 1   MDPITYERITRRQR--RSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSI---VEIKK 60
           M+PITY+RI RR      CRGF L SRR SVSKLR+KF WLLRILNRWRRS    ++I K
Sbjct: 1   MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 60

Query: 61  S--GTSSKGSSNSAAQ--------AAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPS 108
           +  G  SK S+ ++A+          +LRSFRRSNSFYAEAIADCLDFIK +S  S   S
Sbjct: 61  ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 120

BLAST of CsGy3G000080 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110 bits (274), Expect = 2.21e-27
Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0

Query: 1   MDPITYERITRRQR--RSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSI---VEIKK 60
           M+PITY+RI RR      CRGF L SRR SVSKLR+KF WLLRILNRWRRS    ++I K
Sbjct: 76  MEPITYQRIRRRSHGFARCRGFHLHSRRFSVSKLRAKFDWLLRILNRWRRSYSWSIKINK 135

Query: 61  S--GTSSKGSSNSAAQ--------AAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPS 108
           +  G  SK S+ ++A+          +LRSFRRSNSFYAEAIADCLDFIK +S  S   S
Sbjct: 136 ARRGGRSKASATASAEFPRCVDRGECRLRSFRRSNSFYAEAIADCLDFIKRSSVSSDRAS 195

BLAST of CsGy3G000080 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia])

HSP 1 Score: 103 bits (256), Expect = 8.13e-25
Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 0

Query: 1   MDPITYERI----TRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKS 60
           M+PI+YERI    +RR+ +S RGFRL SRR SVS+LR+KF  LLRILN+WRRSI ++++S
Sbjct: 78  MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKMRRS 137

Query: 61  GTSSKGSSNSAAQAA-------KLRSFRRSNSFYAEAIADCLDFIKTTSSFS 101
                      A+ A       +LRSFRRSNSFYAEA+ADCLDFIKT +S S
Sbjct: 138 K----------AEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSS 179

BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 2.29e-69
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112
           KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112

BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 1.94e-59
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERI RR RRSCRGFRLTSRRLSVSKL+SKFGWLLRILN WRRSIV+IKK G SS
Sbjct: 1   MDPITYERIRRRPRRSCRGFRLTSRRLSVSKLQSKFGWLLRILNWWRRSIVDIKKRGRSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSS-FSTPPSTIPTHTF 112
           KGSSNS AQA +LRSFRRSNSFYAEAIADCLDFIKT+SS FSTPPSTIPTHTF
Sbjct: 61  KGSSNSGAQATRLRSFRRSNSFYAEAIADCLDFIKTSSSSFSTPPSTIPTHTF 113

BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 3.94e-25
Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 0

Query: 1   MDPITYERI----TRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKS 60
           M+PI+YERI    +RR+ +S RGFRL SRR SVS+LR+KF  LLRILN+WRRSI ++++S
Sbjct: 78  MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRSIKKMRRS 137

Query: 61  GTSSKGSSNSAAQAA-------KLRSFRRSNSFYAEAIADCLDFIKTTSSFS 101
                      A+ A       +LRSFRRSNSFYAEA+ADCLDFIKT +S S
Sbjct: 138 K----------AEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSS 179

BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A4S4EGV4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_019365 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 9.28e-16
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRG----FRLTSRRLSVSKLRSKFGWLLRILNRWRRS----IVE 60
           M  ++Y +++RR   SCRG    FRL  R+LSV +LR+KF +L R+ +RWR S    +  
Sbjct: 1   MGHMSYNKVSRRSLSSCRGRRRCFRLNPRKLSVYRLRAKFLYLFRLFSRWRSSCGHALDS 60

Query: 61  IKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIK 95
           IKK  T S  S +S+ +   + +  RSNSFY+EAIADCL+FIK
Sbjct: 61  IKKGITRSSSSCSSSRRNMVIPNIDRSNSFYSEAIADCLEFIK 103

BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A2P6RL53 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096741 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.13e-14
Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 0

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           M  ++Y R+     R+ RGFRL  RR SVS+LR++F    + L+RWR S +  + S TSS
Sbjct: 1   MGHMSYNRVG--NVRANRGFRLNPRRFSVSRLRTRFLCFFKFLSRWRCSCMR-RASTTSS 60

Query: 61  KGSSNSAAQAAK-------------LRSFRRSNSFYAEAIADCLDFIKTTS 98
            GSS+S     K             LRS+ RSNSFYAEAIADCL+FIK +S
Sbjct: 61  NGSSSSRGLVRKKLQNKGSRVDCGRLRSYGRSNSFYAEAIADCLEFIKRSS 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8637405.14.74e-69100.00hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical prote... [more]
KAA0052904.14.01e-5989.38hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK1135... [more]
KAG7027838.12.96e-2857.72hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6596289.12.21e-2757.72hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022158286.18.13e-2557.14uncharacterized protein LOC111024807 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A0A0L3I72.29e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1[more]
A0A5A7UC851.94e-5989.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1E0I43.94e-2557.14uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A4S4EGV49.28e-1646.60Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0193... [more]
A0A2P6RL533.13e-1446.85Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096741 PE=4... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34996OS06G0327400 PROTEINcoord: 2..101
NoneNo IPR availablePANTHERPTHR34996:SF3OS06G0327400 PROTEINcoord: 2..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G000080.1CsGy3G000080.1mRNA