CsGy3G000080 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACATATAAATATATATATATTCCATTTGCACATATAAATAACGATATCCTGCGTGAAGTTGGGTTAAACTTTTCAAAGCATTTCTTTTCAGACGAGACAGACAACCGGCGGAAGCCACCAAAAAAGAAGATTATATTCCGGATCGATTTTTCAATATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAATTTTCTAGCTTTTTTTCTTCTTTTCTTTATCGCATCCCATATGGTATATTATATTATTACTGGCGATGGTTTAATCCTTTCCTACACAATCAATTGAACATACTTCTTCACCTTACTCC TCCACATATAAATATATATATATTCCATTTGCACATATAAATAACGATATCCTGCGTGAAGTTGGGTTAAACTTTTCAAAGCATTTCTTTTCAGACGAGACAGACAACCGGCGGAAGCCACCAAAAAAGAAGATTATATTCCGGATCGATTTTTCAATATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAATTTTCTAGCTTTTTTTCTTCTTTTCTTTATCGCATCCCATATGGTATATTATATTATTACTGGCGATGGTTTAATCCTTTCCTACACAATCAATTGAACATACTTCTTCACCTTACTCC ATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAA MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF* Homology
BLAST of CsGy3G000080 vs. NCBI nr
Match: KAE8637405.1 (hypothetical protein CSA_023382 [Cucumis sativus] >KGN55589.1 hypothetical protein Csa_011775 [Cucumis sativus]) HSP 1 Score: 212 bits (540), Expect = 4.74e-69 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsGy3G000080 vs. NCBI nr
Match: KAA0052904.1 (hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa] >TYK11358.1 hypothetical protein E5676_scaffold139G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 187 bits (475), Expect = 4.01e-59 Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of CsGy3G000080 vs. NCBI nr
Match: KAG7027838.1 (hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110 bits (274), Expect = 2.96e-28 Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of CsGy3G000080 vs. NCBI nr
Match: KAG6596289.1 (hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110 bits (274), Expect = 2.21e-27 Identity = 71/123 (57.72%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of CsGy3G000080 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia]) HSP 1 Score: 103 bits (256), Expect = 8.13e-25 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A0A0L3I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1) HSP 1 Score: 212 bits (540), Expect = 2.29e-69 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A5A7UC85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00100 PE=4 SV=1) HSP 1 Score: 187 bits (475), Expect = 1.94e-59 Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A6J1E0I4 (uncharacterized protein LOC111024807 OS=Momordica charantia OX=3673 GN=LOC111024807 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 3.94e-25 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A4S4EGV4 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_019365 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 9.28e-16 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0
BLAST of CsGy3G000080 vs. ExPASy TrEMBL
Match: A0A2P6RL53 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096741 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.13e-14 Identity = 52/111 (46.85%), Postives = 67/111 (60.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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