CsGy2G025180 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G025180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein of unknown function (DUF 3339)
Location	Gy14Chr2: 32720898 .. 32721513 (-)
RNA-Seq Expression	CsGy2G025180
Synteny	CsGy2G025180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAAACCCCACTTATGAAAAAACAAAAAAAGAAAACATGTGAATCTGAATAACTTCATTCACTAAGCTTCAACTTTCCAAGTCATCCCTCCACCATAATTTTGTCCTTTTCTTCACCGCTATTAACACCTTAGCTTCCATTGCTTTTGATATGTTCCTGATCGTCTCTCTGTTGGTTTGTTGTTGAGAGGGAGAGGTACTATCGAGAAAGATCAATGGCGGATTGGGGTCCGGTTTTTGTAGCGGTGATGTTGTTCGTTCTGCTAACTCCGGGCTTGTTGGTTCAGATGCCTGGGAAGAGTCGGTTCGTTGAATTTGGGAATTTTCAGACGAGTGGAGTCTCCATTTTGGTTCATTCAATTCTCTATTTTGCATTGATCTGTATCTTCTTGTTGGCTGTTCGTGTTCATGTTTATATGGGCTCCTAATTTCACATCTTTCTCTCAATTTTTTTTCTTTCTTTCCCTTAAATCTGATTGTCTTTTGTCTTTAAACTCGTTTTGTATCCATTTTTTTCTCAATCTCCTTTGATTTGTTAATAAGTATGTGTGGGTTTGCCATCTTTGAAGATGAGGAATTGGTATATAGCATCATTCTCTTAACTTTCTCTTCTATG

mRNA sequence

AGCAAACCCCACTTATGAAAAAACAAAAAAAGAAAACATGTGAATCTGAATAACTTCATTCACTAAGCTTCAACTTTCCAAGTCATCCCTCCACCATAATTTTGTCCTTTTCTTCACCGCTATTAACACCTTAGCTTCCATTGCTTTTGATATGTTCCTGATCGTCTCTCTGTTGGTTTGTTGTTGAGAGGGAGAGGTACTATCGAGAAAGATCAATGGCGGATTGGGGTCCGGTTTTTGTAGCGGTGATGTTGTTCGTTCTGCTAACTCCGGGCTTGTTGGTTCAGATGCCTGGGAAGAGTCGGTTCGTTGAATTTGGGAATTTTCAGACGAGTGGAGTCTCCATTTTGGTTCATTCAATTCTCTATTTTGCATTGATCTGTATCTTCTTGTTGGCTGTTCGTGTTCATGTTTATATGGGCTCCTAATTTCACATCTTTCTCTCAATTTTTTTTCTTTCTTTCCCTTAAATCTGATTGTCTTTTGTCTTTAAACTCGTTTTGTATCCATTTTTTTCTCAATCTCCTTTGATTTGTTAATAAGTATGTGTGGGTTTGCCATCTTTGAAGATGAGGAATTGGTATATAGCATCATTCTCTTAACTTTCTCTTCTATG

Coding sequence (CDS)

ATGGCGGATTGGGGTCCGGTTTTTGTAGCGGTGATGTTGTTCGTTCTGCTAACTCCGGGCTTGTTGGTTCAGATGCCTGGGAAGAGTCGGTTCGTTGAATTTGGGAATTTTCAGACGAGTGGAGTCTCCATTTTGGTTCATTCAATTCTCTATTTTGCATTGATCTGTATCTTCTTGTTGGCTGTTCGTGTTCATGTTTATATGGGCTCCTAA

Protein sequence

MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLAVRVHVYMGS*

Homology

[Close]

BLAST of CsGy2G025180 vs. NCBI nr
Match: KAA0056547.1 (uncharacterized protein E6C27_scaffold288G00490 [Cucumis melo var. makuwa] >TYK02715.1 uncharacterized protein E5676_scaffold1154G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (340), Expect = 7.58e-40
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          AVRVHVYMGS
Sbjct: 61 AVRVHVYMGS 70

[Close]

BLAST of CsGy2G025180 vs. NCBI nr
Match: XP_022134304.1 (uncharacterized protein LOC111006599 [Momordica charantia])

HSP 1 Score: 131 bits (329), Expect = 3.62e-38
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAV+LFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          AV VHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CsGy2G025180 vs. NCBI nr
Match: XP_011649954.2 (uncharacterized protein LOC101211888 [Cucumis sativus])

HSP 1 Score: 130 bits (328), Expect = 4.35e-37
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVRVHVYMG 69
          AVRVHVY G
Sbjct: 61 AVRVHVYNG 69

[Close]

BLAST of CsGy2G025180 vs. NCBI nr
Match: KAG6578365.1 (hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (320), Expect = 8.55e-37
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAV+LFVLLTPGLLVQMPGK+RF+EFGNFQTSGVSILVHS LYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKNRFIEFGNFQTSGVSILVHSALYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          AV VHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CsGy2G025180 vs. NCBI nr
Match: XP_008379108.2 (uncharacterized protein LOC103442131 [Malus domestica] >TQD78466.1 hypothetical protein C1H46_035956 [Malus baccata])

HSP 1 Score: 125 bits (315), Expect = 4.96e-36
Identity = 61/70 (87.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPVF+AV+LFVLLTPGLL+QMPGKSRFVEFGNFQTSGVSILVHSI+YFALICIFLL
Sbjct: 1  MSDWGPVFIAVLLFVLLTPGLLIQMPGKSRFVEFGNFQTSGVSILVHSIIYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          A+ VH+Y+GS
Sbjct: 61 AIGVHMYVGS 70

[Close]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL
Match: A0A5D3BUE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00130 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 3.67e-40
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          AVRVHVYMGS
Sbjct: 61 AVRVHVYMGS 70

[Close]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL
Match: A0A6J1BYE9 (uncharacterized protein LOC111006599 OS=Momordica charantia OX=3673 GN=LOC111006599 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.75e-38
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPVFVAV+LFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL
Sbjct: 1  MADWGPVFVAVVLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          AV VHVYMGS
Sbjct: 61 AVGVHVYMGS 70

[Close]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL
Match: A0A540KW79 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_035956 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 2.40e-36
Identity = 61/70 (87.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPVF+AV+LFVLLTPGLL+QMPGKSRFVEFGNFQTSGVSILVHSI+YFALICIFLL
Sbjct: 1  MSDWGPVFIAVLLFVLLTPGLLIQMPGKSRFVEFGNFQTSGVSILVHSIIYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          A+ VH+Y+GS
Sbjct: 61 AIGVHMYVGS 70

[Close]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL
Match: A0A5N5GJT0 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_036437 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 3.41e-36
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPVF+AV+LFVLLTPGLL+QMPGKSRFVEFGNFQTSGVSILVHSI+YFALICIFLL
Sbjct: 1  MSDWGPVFIAVLLFVLLTPGLLIQMPGKSRFVEFGNFQTSGVSILVHSIIYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          A+ VH+Y GS
Sbjct: 61 AIGVHMYFGS 70

[Close]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL
Match: A0A540LU73 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_024378 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 4.85e-36
Identity = 60/70 (85.71%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPVF+AV+LF+LLTPGLL+QMPGKSRFVEFGNFQTSGVSILVHSI+YFALICIFLL
Sbjct: 1  MSDWGPVFIAVVLFILLTPGLLIQMPGKSRFVEFGNFQTSGVSILVHSIIYFALICIFLL 60

Query: 61 AVRVHVYMGS 70
          A+ VH+Y+GS
Sbjct: 61 AIGVHMYVGS 70

[Close]

BLAST of CsGy2G025180 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 110.5 bits (275), Expect = 5.5e-25
Identity = 46/69 (66.67%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M+DWGPV V V+LFV+LTPGLL Q+PG+ ++VEFGNFQTS VS++VHS+LYF+L+C+FLL
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AVRVHVYMG 70
          A+++H+Y+G
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of CsGy2G025180 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-22
Identity = 45/66 (68.18%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          M DWGPVFVAV LFVLLTPGLL+Q+PG+ R VEFG FQTSG+S++VH+++YF L+CI LL
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AVRVHV 67
          A+++H+
Sbjct: 61 ALQIHI 66

[Close]

BLAST of CsGy2G025180 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-22
Identity = 48/70 (68.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPV VAV+LFVLLTPGLL Q+P + R VEFGN QTSG SILVH+I++F LI IF +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AVRVHVYMGS 71
          A+R+H+Y G+
Sbjct: 61 AIRLHIYTGT 70

[Close]

BLAST of CsGy2G025180 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 96.7 bits (239), Expect = 8.2e-21
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 1  MADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLL 60
          MADWGPV +AV+LFV+L+PGLL Q+P   R VEFGN QTSG SILVH+I++F LI IF +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AVRVHVYMG 70
          A+ VH+Y G
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of CsGy2G025180 vs. TAIR 10
Match: AT5G40980.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-19
Identity = 38/66 (57.58%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 2  ADWGPVFVAVMLFVLLTPGLLVQMPGKSRFVEFGNFQTSGVSILVHSILYFALICIFLLA 61
          ADWGPV VAV LF+LL+PGLL Q+P ++R +EFGN  TSG+SILVH+I+YF ++ I ++A
Sbjct: 3  ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query: 62 VRVHVY 68
          +++H++
Sbjct: 63 IQIHIH 68

The following BLAST results are available for this feature:

BLAST of CsGy2G025180 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G025180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056547.1	7.58e-40	100.00	uncharacterized protein E6C27_scaffold288G00490 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_022134304.1	3.62e-38	97.14	uncharacterized protein LOC111006599 [Momordica charantia]	[more]
XP_011649954.2	4.35e-37	98.55	uncharacterized protein LOC101211888 [Cucumis sativus]	[more]
KAG6578365.1	8.55e-37	92.86	hypothetical protein SDJN03_22813, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008379108.2	4.96e-36	87.14	uncharacterized protein LOC103442131 [Malus domestica] >TQD78466.1 hypothetical ...	[more]

BLAST of CsGy2G025180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUE1	3.67e-40	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1BYE9	1.75e-38	97.14	uncharacterized protein LOC111006599 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A540KW79	2.40e-36	87.14	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_035956 PE=4 SV=1	[more]
A0A5N5GJT0	3.41e-36	87.14	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A540LU73	4.85e-36	85.71	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_024378 PE=4 SV=1	[more]

BLAST of CsGy2G025180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08391.1	5.5e-25	66.67	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	1.1e-22	68.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48660.1	1.5e-22	68.57	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	8.2e-21	65.22	Protein of unknown function (DUF 3339)	[more]
AT5G40980.1	7.6e-19	57.58	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 1.6E-35 score: 121.1
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF71	BNAC07G48990D PROTEIN	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G025180.1	CsGy2G025180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane