CsGy2G025150 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G025150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein of unknown function (DUF 3339)
Location	Gy14Chr2: 32710865 .. 32711074 (-)
RNA-Seq Expression	CsGy2G025150
Synteny	CsGy2G025150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATTGGGCCCCTGTTCTAATAGCTGTTATACTGTTCGTAGTTCTTAGCCCCGGCGTTCTGTTTCAGCTTCCTGGAAATGACAGAGTTGTGCAGTTCATCAACATGCAAACCAGTGCCATCTCCGTCTTCGTTCACTCCATCTTTTTCTTTGGCCTCATCACTATCTTTGTCATCGCCATTGACGTCCATATTTCCTCTGGATAA

mRNA sequence

ATGGGGGATTGGGCCCCTGTTCTAATAGCTGTTATACTGTTCGTAGTTCTTAGCCCCGGCGTTCTGTTTCAGCTTCCTGGAAATGACAGAGTTGTGCAGTTCATCAACATGCAAACCAGTGCCATCTCCGTCTTCGTTCACTCCATCTTTTTCTTTGGCCTCATCACTATCTTTGTCATCGCCATTGACGTCCATATTTCCTCTGGATAA

Coding sequence (CDS)

ATGGGGGATTGGGCCCCTGTTCTAATAGCTGTTATACTGTTCGTAGTTCTTAGCCCCGGCGTTCTGTTTCAGCTTCCTGGAAATGACAGAGTTGTGCAGTTCATCAACATGCAAACCAGTGCCATCTCCGTCTTCGTTCACTCCATCTTTTTCTTTGGCCTCATCACTATCTTTGTCATCGCCATTGACGTCCATATTTCCTCTGGATAA

Protein sequence

MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVIAIDVHISSG*

Homology

[Close]

BLAST of CsGy2G025150 vs. NCBI nr
Match: XP_011649952.1 (uncharacterized protein LOC101212375 [Cucumis sativus] >KGN63158.1 hypothetical protein Csa_022526 [Cucumis sativus])

HSP 1 Score: 131 bits (330), Expect = 2.37e-38
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI
Sbjct: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60

Query: 61 AIDVHISSG 69
          AIDVHISSG
Sbjct: 61 AIDVHISSG 69

[Close]

BLAST of CsGy2G025150 vs. NCBI nr
Match: XP_008441320.1 (PREDICTED: uncharacterized protein LOC103485470 [Cucumis melo])

HSP 1 Score: 124 bits (312), Expect = 1.33e-35
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          MGDW PVLIAVILFVVLSPGVLFQLPGNDRVVQF+NMQTSAISVFVHSI FFGLITIFVI
Sbjct: 1  MGDWGPVLIAVILFVVLSPGVLFQLPGNDRVVQFVNMQTSAISVFVHSIIFFGLITIFVI 60

Query: 61 AIDVHISSG 69
          AI VHISSG
Sbjct: 61 AIGVHISSG 69

[Close]

BLAST of CsGy2G025150 vs. NCBI nr
Match: XP_038886424.1 (uncharacterized protein LOC120076617 [Benincasa hispida])

HSP 1 Score: 122 bits (305), Expect = 1.55e-34
Identity = 61/69 (88.41%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          MGDW PV+IAV+LFV+LSPGVLFQLPGN+RVVQF+NMQTSAISVFVH+I FFGLITIFVI
Sbjct: 1  MGDWGPVVIAVVLFVILSPGVLFQLPGNNRVVQFLNMQTSAISVFVHTIIFFGLITIFVI 60

Query: 61 AIDVHISSG 69
          AIDVHISSG
Sbjct: 61 AIDVHISSG 69

[Close]

BLAST of CsGy2G025150 vs. NCBI nr
Match: XP_002509498.1 (uncharacterized protein LOC8271433 [Ricinus communis] >EEF50885.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 108 bits (269), Expect = 4.84e-29
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PV+IAV+LFVVLSPGVLFQLPGN RVV+F N+QTS +SVFVH+I FFGLITIF+I
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 61 AIDVHISSG 69
          AI VHI++G
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of CsGy2G025150 vs. NCBI nr
Match: XP_022134280.1 (uncharacterized protein LOC111006581 [Momordica charantia])

HSP 1 Score: 107 bits (268), Expect = 6.88e-29
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PVLIAV+LFVVLSPGVLFQLPG  RVV+F+N++TSAISVFVH++ FFGLITIF+I
Sbjct: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 61 AIDVHISSG 69
          AI VHI++G
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL
Match: A0A0A0LMX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406080 PE=4 SV=1)

HSP 1 Score: 131 bits (330), Expect = 1.15e-38
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI
Sbjct: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60

Query: 61 AIDVHISSG 69
          AIDVHISSG
Sbjct: 61 AIDVHISSG 69

[Close]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL
Match: A0A1S3B351 (uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 6.43e-36
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          MGDW PVLIAVILFVVLSPGVLFQLPGNDRVVQF+NMQTSAISVFVHSI FFGLITIFVI
Sbjct: 1  MGDWGPVLIAVILFVVLSPGVLFQLPGNDRVVQFVNMQTSAISVFVHSIIFFGLITIFVI 60

Query: 61 AIDVHISSG 69
          AI VHISSG
Sbjct: 61 AIGVHISSG 69

[Close]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL
Match: B9RBG4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1)

HSP 1 Score: 108 bits (269), Expect = 2.35e-29
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PV+IAV+LFVVLSPGVLFQLPGN RVV+F N+QTS +SVFVH+I FFGLITIF+I
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 61 AIDVHISSG 69
          AI VHI++G
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL
Match: A0A6J1BXW3 (uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006581 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 3.33e-29
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PVLIAV+LFVVLSPGVLFQLPG  RVV+F+N++TSAISVFVH++ FFGLITIF+I
Sbjct: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 61 AIDVHISSG 69
          AI VHI++G
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL
Match: A0A2C9U7J2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 7.87e-28
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PV++AV+LFVVLSPGVLFQLPG  RVV+F NMQTS  SVFVH+I FFGLITIF+I
Sbjct: 1  MADWGPVVVAVVLFVVLSPGVLFQLPGKGRVVEFANMQTSGASVFVHTIIFFGLITIFLI 60

Query: 61 AIDVHISSG 69
          AI +HI++G
Sbjct: 61 AIGIHITTG 69

[Close]

BLAST of CsGy2G025150 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-21
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PVLIAVILFVVLSPG+LFQ+P   RVV+F NMQTS  S+ VH+I FFGLITIF I
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AIDVHISSG 70
          AI+VHI SG
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of CsGy2G025150 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 91.7 bits (226), Expect = 2.6e-19
Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PV++AVILFV+L+PG+LFQ+P   RVV+F NMQTS  S+ VH+I FFGLITIF I
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AIDVHISSG 70
          AI +HI +G
Sbjct: 61 AIRLHIYTG 69

[Close]

BLAST of CsGy2G025150 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 85.9 bits (211), Expect = 1.4e-17
Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 1  MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
          M DW PVL+ VILFV+L+PG+LFQLPG  + V+F N QTSA+SV VHS+ +F L+ +F++
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AIDVHISSG 70
          A+ +HI  G
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of CsGy2G025150 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-16
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 3  DWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVIAI 62
          DW PV +AV+LFVVLSPG+LFQLP   RV++  NM TS IS+ VH+I FF +ITI VIAI
Sbjct: 5  DWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIAI 64

Query: 63 DVHI 67
           +HI
Sbjct: 65 QIHI 68

[Close]

BLAST of CsGy2G025150 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 7.8e-16
Identity = 35/69 (50.72%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 1   MGDWAPVLIAVILFVVLSPGVLFQLPGNDRVVQFINMQTSAISVFVHSIFFFGLITIFVI 60
           M DWAPVL+ V+LFV+LSPG+LF LPGN+R V F  ++T+  ++ VH++ FF + TI ++
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  AIDVHISSG 70
           A+++HI +G
Sbjct: 134 ALNLHIYTG 142

The following BLAST results are available for this feature:

BLAST of CsGy2G025150 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G025150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649952.1	2.37e-38	100.00	uncharacterized protein LOC101212375 [Cucumis sativus] >KGN63158.1 hypothetical ...	[more]
XP_008441320.1	1.33e-35	94.20	PREDICTED: uncharacterized protein LOC103485470 [Cucumis melo]	[more]
XP_038886424.1	1.55e-34	88.41	uncharacterized protein LOC120076617 [Benincasa hispida]	[more]
XP_002509498.1	4.84e-29	76.81	uncharacterized protein LOC8271433 [Ricinus communis] >EEF50885.1 conserved hypo...	[more]
XP_022134280.1	6.88e-29	76.81	uncharacterized protein LOC111006581 [Momordica charantia]	[more]

BLAST of CsGy2G025150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMX4	1.15e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406080 PE=4 SV=1	[more]
A0A1S3B351	6.43e-36	94.20	uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=...	[more]
B9RBG4	2.35e-29	76.81	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1	[more]
A0A6J1BXW3	3.33e-29	76.81	uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A2C9U7J2	7.87e-28	73.91	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=...	[more]

BLAST of CsGy2G025150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63500.1	1.6e-21	73.91	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	2.6e-19	65.22	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	1.4e-17	56.52	Protein of unknown function (DUF 3339)	[more]
AT3G01940.1	3.5e-16	64.06	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	7.8e-16	50.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..66 e-value: 7.8E-32 score: 109.3
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF69	SUBFAMILY NOT NAMED	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G025150.1	CsGy2G025150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane