CsGy2G024550 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G024550
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 32299543 .. 32300222 (+)
RNA-Seq ExpressionCsGy2G024550
SyntenyCsGy2G024550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATCTTAATACAAAGGCGTCCGATTACTACTACTAATACGGTACGTATTCCCCCCAAAAGGGAGAAAATTCCTCGCCGATTTTTCCCTTTACTCCAAGTCTTCCACACAGCGGACAAAGTCAAATATGAGAAACCCCACCGATTTGTCCCAATTGGAAACTCTTTCTTCCTAATTTCCTCGCCGGTGTCTTTCCTCTTCGTTTTCCCCCAATGCCTTTTGTTTTTTGGTGATTGTTCATTGATTCTTTTTCACCATCTCTCTTCCTTGGCTGCGGAAATTTGGTTTAGGTGAGATATGATTATTCTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTAAGTTTAGGATTTTGATGTCATCCGGGACTGTTCTTACTGCTCTTGATTATTTGCTATTTTGTTTGGTTTCTGTTGATCTCTTCAATTTGATTTTTGTATTGTTTCTTCTTTTTGAACTGTTAACGCGTTTGAAGACGATCTGTTGAATCGATTATGCTCAACTTGCTTTCTGTGTTTTGTTCCTTCTAATGCCAGAATATTCAACCGGAGTAGGCTGGTTTCTTCTGAGTACCATCGGTTGTTCCCCAATTGCTTTGATCTGCAACCGATAATTTACTTGCAATTTGTTTGGTTTCTGGAAAAATTCGCGAAAATCAATTGCAATTTTGTCGTTTGA

mRNA sequence

ATGTTAATCTTAATACAAAGGCGTCCGATTACTACTACTAATACGGTACGTATTCCCCCCAAAAGGGAGAAAATTCCTCGCCGATTTTTCCCTTTACTCCAAGTCTTCCACACAGCGGACAAAGTCAAATATGAGAAACCCCACCGATTTGTCCCAATTGGAAACTCTTTCTTCCTAATTTCCTCGCCGGTGTCTTTCCTCTTCGTTTTCCCCCAATGCCTTTTGTTTTTTGGTGATTGTTCATTGATTCTTTTTCACCATCTCTCTTCCTTGGCTGCGGAAATTTGGTTTAGAATATTCAACCGGAGTAGGCTGGTTTCTTCTGAGTACCATCGGTTGTTCCCCAATTGCTTTGATCTGCAACCGATAATTTACTTGCAATTTGTTTGGTTTCTGGAAAAATTCGCGAAAATCAATTGCAATTTTGTCGTTTGA

Coding sequence (CDS)

ATGTTAATCTTAATACAAAGGCGTCCGATTACTACTACTAATACGGTACGTATTCCCCCCAAAAGGGAGAAAATTCCTCGCCGATTTTTCCCTTTACTCCAAGTCTTCCACACAGCGGACAAAGTCAAATATGAGAAACCCCACCGATTTGTCCCAATTGGAAACTCTTTCTTCCTAATTTCCTCGCCGGTGTCTTTCCTCTTCGTTTTCCCCCAATGCCTTTTGTTTTTTGGTGATTGTTCATTGATTCTTTTTCACCATCTCTCTTCCTTGGCTGCGGAAATTTGGTTTAGAATATTCAACCGGAGTAGGCTGGTTTCTTCTGAGTACCATCGGTTGTTCCCCAATTGCTTTGATCTGCAACCGATAATTTACTTGCAATTTGTTTGGTTTCTGGAAAAATTCGCGAAAATCAATTGCAATTTTGTCGTTTGA

Protein sequence

MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLISSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDLQPIIYLQFVWFLEKFAKINCNFVV*
Homology
[Close]
BLAST of CsGy2G024550 vs. NCBI nr
Match: KGN63087.1 (hypothetical protein Csa_022442 [Cucumis sativus])

HSP 1 Score: 298 bits (762), Expect = 7.03e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI 60
           MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI
Sbjct: 1   MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI 60

Query: 61  SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL 120
           SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL
Sbjct: 61  SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL 120

Query: 121 QPIIYLQFVWFLEKFAKINCNFVV 144
           QPIIYLQFVWFLEKFAKINCNFVV
Sbjct: 121 QPIIYLQFVWFLEKFAKINCNFVV 144

[Close]
BLAST of CsGy2G024550 vs. ExPASy TrEMBL
Match: A0A0A0LQM5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401470 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 3.41e-102
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI 60
           MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI
Sbjct: 1   MLILIQRRPITTTNTVRIPPKREKIPRRFFPLLQVFHTADKVKYEKPHRFVPIGNSFFLI 60

Query: 61  SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL 120
           SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL
Sbjct: 61  SSPVSFLFVFPQCLLFFGDCSLILFHHLSSLAAEIWFRIFNRSRLVSSEYHRLFPNCFDL 120

Query: 121 QPIIYLQFVWFLEKFAKINCNFVV 144
           QPIIYLQFVWFLEKFAKINCNFVV
Sbjct: 121 QPIIYLQFVWFLEKFAKINCNFVV 144

The following BLAST results are available for this feature:
BLAST of CsGy2G024550 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G024550 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63087.17.03e-102100.00hypothetical protein Csa_022442 [Cucumis sativus][more]
BLAST of CsGy2G024550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQM53.41e-102100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401470 PE=4 SV=1[more]
BLAST of CsGy2G024550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G024550.2CsGy2G024550.2mRNA