CsGy2G023260 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G023260
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPhospholipase D
LocationGy14Chr2: 31309827 .. 31311386 (+)
RNA-Seq ExpressionCsGy2G023260
SyntenyCsGy2G023260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACGCTTGCTTCATGGGACGCTGCATGCCGATATATATGAAATCGACAGGCTTCAAACTGGATTTCCTGTTTTCTGCGGGAAGGTATGCTTCAACAAGTTCCGTTGATTTTGATTCTATATCTCATTTTTGTAGAATGTAATTAAAATATATTTCTCTTGTCTTGAACCAAACTTAACAAACAGCATATTCGATTGGTAATGAAATTGTTTTAGATGATGAGTGTTGTCCTCTAAGAAACACTTATAATGGAGAAAACATAGATTATCATGTTGACTTTATACATGCTGAAAATAACCTTGGTTAAATAAACATTTCCATGTCTTTGGAAGAGAAAAGGAGTTTAAGTGAAAAGGACTGGTTTATAAGAAACAAAAGCAGTTTAGTACCCAAATCTCTATGTTTCAAGATGAATTGAATTCCTTTTCAATTCTATTGCAAATTAAAAGAGTTTGGATGTCATTATGGCGTTGGTATGTTATTTATGGTGATGGCTTCATAGTGTGTTCTAACTCTAAGCTTGTTATAATGAGTTCGCTGAATTTATTAGCTGACATTTCTTAGCGTCTTGAGTTTGTTATAAAATTTGGTGTAAAAGATTTGATACGATTTCTTTTATCTGCATTTTTGTGCATTGAAGTTCATCAATAATCTTAATTCTACAAAATTGTATTTACTACATTATTTGCAGTCTCTAACTGAGCTGAATTTTTCATTGCAGGACAAAAGGGTAAGAGTCTTTCTTTGTGAGATTACTTGAAAAAGTCAGGTTTTCATCCAATCCATCAATGCTCTAGTTAATTTTAGATTCATTTATCATATTTTTCCTCATGGATATCCAAGAATTCTGTCTGTTCTCAAACTCCTATGACGTAAATTTATCTTATAACTTAGCATTGGCCTGTGTCCTTTTATCTCTAAAATGTGTGGCTTGATATACTGTGCAAGGTTGATAATTAGAAATATAAATTACCTCTTTCCCAGTTGTGGTCCTGCTATGCTACAAAACTAGAAGAAAAAATTAGTGCAAAAATAAATAAATAAACATGTCAAAAAATGGCACAGGAAGCTGTTCCATTCCTGATATTTGAAGTTTTTTATATTTGTTCATTGTAACAATTGATTAATATAATCATTAGGAGTAAGTTCCGTGATATGATTTCTATGGCCTGTTGGTTCTCTGAGTTTCTTATTTAGATAAAATTTGAATCCAGCAAAAGTATCATTTCCACATAAATTGGAACTAAAACTCTTATGTTCAAAAACCATTAAGCTGGTGACTTTTGGGAAGAATAACCAACAATAAAAGCATCTTTACTGGCCTTACATCTTCCTATAGAAGCTAGTTATTCTTTTAGGACCTCCTCATAATTGGAACTTAAGATCCTCTCTTGATAACTTTTACTTATCCTCACATTTTCATCTTCTTTTCATGTGAAAAGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGATGCATCCTTTGTCGTCCTGAGGTATGTAAATTTTCGGTGAATGTAGCATTGTTTCGTGTCTTATCCTTTAACTGGGGTCTAA

mRNA sequence

ATGCCACGCTTGCTTCATGGGACGCTGCATGCCGATATATATGAAATCGACAGGCTTCAAACTGGATTTCCTGTTTTCTGCGGGAAGGACAAAAGGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGATGCATCCTTTGTCGTCCTGAGCATTGTTTCGTGTCTTATCCTTTAACTGGGGTCTAA

Coding sequence (CDS)

ATGCCACGCTTGCTTCATGGGACGCTGCATGCCGATATATATGAAATCGACAGGCTTCAAACTGGATTTCCTGTTTTCTGCGGGAAGGACAAAAGGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGATGCATCCTTTGTCGTCCTGAGCATTGTTTCGTGTCTTATCCTTTAACTGGGGTCTAA

Protein sequence

MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPEHCFVSYPLTGV*
Homology
[Close]
BLAST of CsGy2G023260 vs. NCBI nr
Match: XP_011649822.1 (phospholipase D alpha 1 isoform X1 [Cucumis sativus] >XP_011649823.1 phospholipase D alpha 1 isoform X1 [Cucumis sativus] >XP_031737205.1 phospholipase D alpha 1 isoform X1 [Cucumis sativus] >XP_031737206.1 phospholipase D alpha 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 111 bits (277), Expect = 1.49e-26
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. NCBI nr
Match: XP_008445210.1 (PREDICTED: phospholipase D alpha 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 107 bits (266), Expect = 4.58e-25
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIY ID+LQTGFP+FCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHADIYGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. NCBI nr
Match: XP_038885340.1 (phospholipase D alpha 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 104 bits (259), Expect = 4.05e-24
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIY IDRLQTGFP+FCGKDKRSTKKFLAGVKR ILCRPE
Sbjct: 1  MPRLLHGTLHADIYRIDRLQTGFPIFCGKDKRSTKKFLAGVKRRILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. NCBI nr
Match: XP_022131534.1 (phospholipase D alpha 1-like isoform X4 [Momordica charantia])

HSP 1 Score: 103 bits (257), Expect = 7.54e-24
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHA+I+ ID+LQTGFP+FCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHANIFGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. NCBI nr
Match: XP_022961928.1 (phospholipase D alpha 1-like [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 3.16e-22
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIY ID+L+TG PVFCGKDKRS KKFLAG+KRC+LCRPE
Sbjct: 1  MPRLLHGTLHADIYGIDKLRTGCPVFCGKDKRSAKKFLAGMKRCLLCRPE 50

[Close]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match: A0A0A0LMC1 (Phospholipase D OS=Cucumis sativus OX=3659 GN=Csa_2G381740 PE=3 SV=1)

HSP 1 Score: 111 bits (277), Expect = 7.24e-27
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match: A0A1S3BBN4 (Phospholipase D OS=Cucumis melo OX=3656 GN=LOC103488309 PE=3 SV=1)

HSP 1 Score: 107 bits (266), Expect = 2.22e-25
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIY ID+LQTGFP+FCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHADIYGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match: A0A6J1BQH8 (Phospholipase D OS=Momordica charantia OX=3673 GN=LOC111004699 PE=3 SV=1)

HSP 1 Score: 103 bits (257), Expect = 3.65e-24
Identity = 45/50 (90.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHA+I+ ID+LQTGFP+FCGKDKRSTKKFLAGVKRCILCRPE
Sbjct: 1  MPRLLHGTLHANIFGIDKLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPE 50

[Close]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match: A0A6J1HDA4 (Phospholipase D OS=Cucurbita moschata OX=3662 GN=LOC111462553 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.53e-22
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTLHADIY ID+L+TG PVFCGKDKRS KKFLAG+KRC+LCRPE
Sbjct: 1  MPRLLHGTLHADIYGIDKLRTGCPVFCGKDKRSAKKFLAGMKRCLLCRPE 50

[Close]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match: A0A6J1K705 (Phospholipase D OS=Cucurbita maxima OX=3661 GN=LOC111491747 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.70e-19
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0 

Query: 1  MPRLLHGTLHADIYEIDRLQTGFPVFCGKDKRSTKKFLAGVKRCILCRPE 50
          MPRLLHGTL ADIY ID+L+TG P+FCGKDKRS KKFLAGVKR ILC PE
Sbjct: 1  MPRLLHGTLQADIYGIDKLRTGCPIFCGKDKRSAKKFLAGVKRRILCCPE 50

The following BLAST results are available for this feature:
BLAST of CsGy2G023260 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G023260 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649822.11.49e-26100.00phospholipase D alpha 1 isoform X1 [Cucumis sativus] >XP_011649823.1 phospholipa... [more]
XP_008445210.14.58e-2594.00PREDICTED: phospholipase D alpha 1-like isoform X1 [Cucumis melo][more]
XP_038885340.14.05e-2494.00phospholipase D alpha 1-like isoform X1 [Benincasa hispida][more]
XP_022131534.17.54e-2490.00phospholipase D alpha 1-like isoform X4 [Momordica charantia][more]
XP_022961928.13.16e-2286.00phospholipase D alpha 1-like [Cucurbita moschata][more]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMC17.24e-27100.00Phospholipase D OS=Cucumis sativus OX=3659 GN=Csa_2G381740 PE=3 SV=1[more]
A0A1S3BBN42.22e-2594.00Phospholipase D OS=Cucumis melo OX=3656 GN=LOC103488309 PE=3 SV=1[more]
A0A6J1BQH83.65e-2490.00Phospholipase D OS=Momordica charantia OX=3673 GN=LOC111004699 PE=3 SV=1[more]
A0A6J1HDA41.53e-2286.00Phospholipase D OS=Cucurbita moschata OX=3662 GN=LOC111462553 PE=3 SV=1[more]
A0A6J1K7052.70e-1982.00Phospholipase D OS=Cucurbita maxima OX=3661 GN=LOC111491747 PE=3 SV=1[more]
BLAST of CsGy2G023260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G023260.2CsGy2G023260.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046466 membrane lipid catabolic process
biological_process GO:0046470 phosphatidylcholine metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009651 response to salt stress
biological_process GO:0009414 response to water deprivation
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity
molecular_function GO:0004630 phospholipase D activity