CsGy2G022050 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G022050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	exosome complex exonuclease RRP46 homolog
Location	Gy14Chr2: 30497168 .. 30500178 (+)
RNA-Seq Expression	CsGy2G022050
Synteny	CsGy2G022050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAGACAGAGATGATGGTCGTACCCCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTCTCTCCATCTTCCACCGACTTCTCTTACTTCTTGCTTTATTAGTTTATGAGCTGGTTTAATTTTGGGAAGTTGTGTTATTTTTCACTGAGTAAGTTTGTTTATCTTGGACTGTGTAGGTGATACGAAGGTTCTTGCTGCTGTCTATGGACCTAAAGCTGGAACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCTAAGACAGGGCAAATTGGTAAGCTTCATGTCTTTCTCCATCTCTGATTCCTATGATAAAATTTCCATTTCCTGAGCTTACTAGTTAATGGCATTGGTAATCTGGTTTTCTTCGCACGCAGTTTACTATTTTGTGTTACAGTTGTATTGAAAACAGCTGATGATATTCTTTGAATGTTCTTGAACCATTTCCTATTTGTTTATCATTACACATTTTATGATGTGTTAGGAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTAAGTCTTACCTTTTTCCCGTTTTTGATGCAAAATGCATTTGATTTCGTGATATGCTACATGTAGTCGTCTTCTTTTGTTCCTGTTCTAAAAACTCTATAGTGCTTGCTCCATGGTGATTTTTTAAAGCGTATTTAACATACATCCAATAGGCATCTCAAAATGTTGTGGATGGTAAGCAAGTTGTAACCCAAGACAAACGATCCTCAACATTCAATTTTCAAATTTATGTTATAGTTATTCAGTTTTATAGTCGTGAAAAATATCATTCTTTAGAGAATTCTTTCTATTCCAATGTTCCTTATAGTCCCATCCAACCCAAGTTTTCTGATTTTTGCTATACTACTCCCGACATGGGCATTTACATAGCGCCACGGCATGTTAATCATTTTGTTTTTCATGTGAAACTTCAAACAACTTGGGAAATAATTAGCCGCAGTATGCTATTCTGTTATTGAGCCTATGTTTATGGAAAGTGGAAATATTCTTAAACCTTTAAGGAGACCTTTATTTTAAAATTGTCGCTGATGGAAATTGGTCCAACATTTGTTCCTTCCCACATCATATTATCATAAAAAATGTTTTGGACTGAACTTTGAAATACATTACATTTAACGCCTTTTCATTACTTTTGCTGCAAACTAGTTTCTTATCTCAAATACATTGATGTTTCCCCCCATAATTGCAGGTTATTCATGATGATGGAGCTGTATCCCTTGTAATTTTATACCTTTTTTTGTAGATTACTAAAGATAATTTTAGGAGAAAACATATGTTACTTACGACACATATAAGTCATTTCATTATGATTCTATTCTGTCCAACTCCTCGCACATACATTAGGGTTGCTGAACCTACCATACTATATAAGAAATTATTCATATTAATATAACCATGGGAATTTACTGTTGGCCCAAGGAAAAAGGATGAACTAGTGCTTACTTACCAATATACTACACACAATTTTCTTATAAATTTGGAGTGCTTTGCACCCTTCTTAAAATATCTTCAAGAACTTCTTTAACAGACTTCTCAAATAGCTTCTTCCTTGTGCTATTAACGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGGTAATTAAGTTTTATGGTCTTATTATTTATGGTCTTATTATTTATGTCTTCACCTGATAAAGGAAAGATTGGCACTGACTGCTCTGCTCTCACCTGATAAAGGAAAGATTGGCACTGACTGCTCTGCTCTGTAAATACAGTTGCGATTTCGTGTTGTTTGTCTGAGAATGGATATGTTATTTTGGATCCAACCAAGATAGAGGAGGAGGTCAGTACTTCACTTTTATTTAATTTATAATACCGTTTGTGGCAGTGCTTGTCCAATTTTGCTGTTTACATTTTTATAAGCATAGAAATGGTATACTGGTCTTAGCAGGGGTTAGGTAAGTAGTTCCAGATTATTAAATTTCTCAAAGAAACCGGGGAAGAGTGAAAATGGTTGAGTTTGATTACTAATCAAGTGAGTTTTGAAGAAAAATGAATTTGAAATTGCAGAAAATGAAGGCCTCTGTGCATTTGGTCTTCCCAAATGCACCTGTCTCAGTAGTTCCTGAAGGATCTACACAAGGTGTAGGTGAACCACTGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGGTATTTTGTCACAAAACATAGCTATTTTCCTCTGGTCGTAATTAAACTTACACGTCTGTTCTGAGTTTTAATAGATTTTTCATTTTAGAATTTCTGTGACTCAACAAGCTTAAACTGAATGTTCATTTCTATATCATATCATGTTAATAATCACATGCTATTATAGTAAGATTACGCATGTCACTATGGTTAAAGTGCTCTTATACTATATGCTCGAGTCACCAACACATTTTGGACAAATTTCTTTTCCTATTTTTTTTTATTCTAGATATATTTTCACTCTCTTGACACTGTAACACAGTCCTTAGATGGACATAATAGATTATTAATTCTCCATGGTTAGGCACACTTCTCTCATCATGCCATGTTTTTCTTTGTAACGTTGTGTTGTGTTTGAAAATGGATTGGGATCTTGTTATAGCATCAAAGGTCAAAACTAGTACAGTTATTCTCCTCTTAGTACAGTTATTATCCTCTGATTGCTTATGGAATCTGAAAAAGTGTGAATGTTAGATGGAAAAATAAGAGTTGGGATCTAAGTTTGTTGTCGTTTAATGTTTAAAGTGGACGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACTACAAAAATGTCTGCTTTTCTGAGGAGAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA

mRNA sequence

ATGGAGATAGACAGAGATGATGGTCGTACCCCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGATACGAAGGTTCTTGCTGCTGTCTATGGACCTAAAGCTGGAACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCTAAGACAGGGCAAATTGGAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCTATTAACGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCGTGTTGTTTGTCTGAGAATGGATATGTTATTTTGGATCCAACCAAGATAGAGGAGGAGAAAATGAAGGCCTCTGTGCATTTGGTCTTCCCAAATGCACCTGTCTCAGTAGTTCCTGAAGGATCTACACAAGGTGTAGGTGAACCACTGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGACGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACTACAAAAATGTCTGCTTTTCTGAGGAGAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA

Coding sequence (CDS)

ATGGAGATAGACAGAGATGATGGTCGTACCCCTAACCAGTTGAGACCACTTGCTTGTTCTTGCAACGTTCTTAATCGTGCTCATGGCTCCGCCAGTTGGTCCCAAGGTGATACGAAGGTTCTTGCTGCTGTCTATGGACCTAAAGCTGGAACGAAGAAGAATGAAAATCCTGAGAAGGCTTCAATTGAGGTTATATGGAAACCTAAGACAGGGCAAATTGGAAAACTGGAAAGGGAGTGTGAGATGATATTAAAGCGGACATTGCAGAGTATTTGCATATTAACTACTAATCCCAATACCACCACATCTATTATTGTTCAGGTTATTCATGATGATGGAGCTCTTCTTCCTTGTGCTATTAACGCATCATGTGCTGCCCTTGTAGATGCCGGAATTCCTTTAAAGCATCTTGCTGTTGCGATTTCGTGTTGTTTGTCTGAGAATGGATATGTTATTTTGGATCCAACCAAGATAGAGGAGGAGAAAATGAAGGCCTCTGTGCATTTGGTCTTCCCAAATGCACCTGTCTCAGTAGTTCCTGAAGGATCTACACAAGGTGTAGGTGAACCACTGGAGCATGGAATAATCACATCTGTAACTCAGGGTGCAATGTCAGTGGACGATTATATTCACTGCCTGGAACGGGGGCGTGCTGCTACTACAAAAATGTCTGCTTTTCTGAGGAGAAGTTTGCAGCCCCAACTCCCAATGGATTCCTCAAAAGCTGGCTGA

Protein sequence

MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSSKAG*

Homology

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BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot
Match: Q9LX74 (Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP46 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 5.2e-104
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

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BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot
Match: Q84T68 (Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RRP46 PE=1 SV=2)

HSP 1 Score: 301.6 bits (771), Expect = 8.1e-81
Identity = 153/238 (64.29%), Postives = 185/238 (77.73%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME  R DGR PNQLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKA
Sbjct: 1   MEESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT +PNTTTS+I+QV+ +DG+LLPCAI
Sbjct: 61  SIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA CAALV AGIPLKHLAVAI C + E+G VILD  K EE+++K+  HLVFPN+  S   
Sbjct: 121 NACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASS 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMD 239
           +   Q   E  E G+ITS+T G MS +DY  C+ERG AA++++S F+R +LQ Q P D
Sbjct: 181 KEPNQ-KEEDSERGLITSITHGVMSEEDYFSCIERGLAASSRISDFMRTTLQKQAPGD 237

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BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot
Match: Q9NQT4 (Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-33
Identity = 79/219 (36.07%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 14  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 74  GKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIP 133
           G  E+  E +++ T +++ + T +P T+ ++++QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 134 LKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEH 193
           ++ L   ++C L  +G ++LDPT  +E++ +A +                     + +E 
Sbjct: 148 MRALFCGVACALDSDGTLVLDPTSKQEKEARAVLTFAL-----------------DSVER 207

Query: 194 GIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQ 233
            ++ S T+G  S  +   CL   +AA+  +  F R SLQ
Sbjct: 208 KLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQ 229

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BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot
Match: Q9CRA8 (Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.3e-33
Identity = 79/219 (36.07%), Postives = 124/219 (56.62%), Query Frame = 0


Query: 14  LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
           LR  AC  N+L+R  GSAS+ QGDT VLA VYGP       E   KA++EVI +PK G  
Sbjct: 28  LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87

Query: 74  GKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAINASCAALVDAGIP 133
           G  E+  E +++ T +++ +   +P T+ ++++QV+ D G+LL C +NA+C ALVDAG+P
Sbjct: 88  GVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147

Query: 134 LKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVPEGSTQGVGEPLEH 193
           ++ L   ++C L  +G ++LDPT  +E++ +A +     +A                 E 
Sbjct: 148 MRALFCGVTCALDSDGNLVLDPTTKQEKEARAILTFALDSA-----------------EQ 207

Query: 194 GIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQ 233
            ++ S T+G  S  +   CL   +AA+  +  F R SLQ
Sbjct: 208 KLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQ 229

[Close]

BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot
Match: Q9SP08 (Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 5   RDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEV 64
           R DGR  N++R +     V+++A GSA +  G+TKV+AAVYGP+    K++  +     V
Sbjct: 10  RLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVV 69

Query: 65  IWKPKTGQIGKLER----------ECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGA 124
           + +    Q    +R          E  +++++T+++  +    P++   I +QV+  DG 
Sbjct: 70  LCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGG 129

Query: 125 LLPCAINASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASV 168
                INA+  AL DAGIP++ LAV+ S     N   +LD   +E+    A V
Sbjct: 130 TRSACINAATLALADAGIPMRDLAVSCSAGYL-NSTPLLDLNYVEDSAGGADV 181

[Close]

BLAST of CsGy2G022050 vs. NCBI nr
Match: XP_004150286.1 (exosome complex exonuclease RRP46 homolog [Cucumis sativus] >KGN62820.1 hypothetical protein Csa_022164 [Cucumis sativus])

HSP 1 Score: 486 bits (1250), Expect = 5.19e-173
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPM+SS
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSS 240

Query: 241 KAG 243
           KAG
Sbjct: 241 KAG 243

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BLAST of CsGy2G022050 vs. NCBI nr
Match: XP_008445020.1 (PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis melo] >KAA0065035.1 exosome complex exonuclease RRP46-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 482 bits (1240), Expect = 1.74e-171
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQGVGEPLEHG+ITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSS
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLSMDSS 240

Query: 241 KAG 243
           KAG
Sbjct: 241 KAG 243

[Close]

BLAST of CsGy2G022050 vs. NCBI nr
Match: XP_022951618.1 (exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exosome complex exonuclease RRP46-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020307.1 Exosome complex exonuclease RRP46-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461 bits (1187), Expect = 2.09e-163
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQ  GEPLE+GIITS+TQGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240

Query: 241 KAG 243
           K G
Sbjct: 241 KVG 243

[Close]

BLAST of CsGy2G022050 vs. NCBI nr
Match: XP_023002484.1 (exosome complex exonuclease RRP46 homolog [Cucurbita maxima])

HSP 1 Score: 460 bits (1184), Expect = 5.99e-163
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQ  GEPLE+GIITS+TQGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240

Query: 241 KAG 243
           K G
Sbjct: 241 KVG 243

[Close]

BLAST of CsGy2G022050 vs. NCBI nr
Match: XP_023538111.1 (exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458 bits (1178), Expect = 4.92e-162
Identity = 225/243 (92.59%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           ME+DRDDGRT NQLRPLACSCNVLNRA+GSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEMDRDDGRTANQLRPLACSCNVLNRAYGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQ  GEPLE+GIITS+TQGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240

Query: 241 KAG 243
           K G
Sbjct: 241 KVG 243

[Close]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL
Match: A0A0A0LLJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1)

HSP 1 Score: 486 bits (1250), Expect = 2.51e-173
Identity = 242/243 (99.59%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPM+SS
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSS 240

Query: 241 KAG 243
           KAG
Sbjct: 241 KAG 243

[Close]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL
Match: A0A5A7VGL5 (Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003630 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 8.42e-172
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQGVGEPLEHG+ITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSS
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLSMDSS 240

Query: 241 KAG 243
           KAG
Sbjct: 241 KAG 243

[Close]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL
Match: A0A1S3BB90 (exosome complex exonuclease RRP46 homolog OS=Cucumis melo OX=3656 GN=LOC103488187 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 8.42e-172
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPN PVSVVP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQGVGEPLEHG+ITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQL MDSS
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLSMDSS 240

Query: 241 KAG 243
           KAG
Sbjct: 241 KAG 243

[Close]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL
Match: A0A6J1GI69 (exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454378 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 1.01e-163
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQ  GEPLE+GIITS+TQGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240

Query: 241 KAG 243
           K G
Sbjct: 241 KVG 243

[Close]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL
Match: A0A6J1KQK5 (exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496308 PE=4 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 2.90e-163
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1   MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
           SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSI+VQVIHDDGALLPCAI
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NASCAALVDAGIPLKHLAVAISCCLSE+GYVILDPTK+EE+KMKASVHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGSTQ  GEPLE+GIITS+TQGAMSVDDYIHCLERGRAAT KMSAFLRRSLQPQLP DSS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240

Query: 241 KAG 243
           K G
Sbjct: 241 KVG 243

[Close]

BLAST of CsGy2G022050 vs. TAIR 10
Match: AT3G46210.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

[Close]

BLAST of CsGy2G022050 vs. TAIR 10
Match: AT3G46210.2 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

[Close]

BLAST of CsGy2G022050 vs. TAIR 10
Match: AT3G46210.3 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

[Close]

BLAST of CsGy2G022050 vs. TAIR 10
Match: AT3G46210.4 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

[Close]

BLAST of CsGy2G022050 vs. TAIR 10
Match: AT3G46210.5 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 182/243 (74.90%), Postives = 211/243 (86.83%), Query Frame = 0


Query: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
           MEIDR+DGRTPNQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
             EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT NPNTTTS+I+QV+HDDG+LLPCAI
Sbjct: 61  CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120

Query: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
           NA+CAALVDAGIP+KHLAVAI CCL+ENGY++LDP K+EE+KM A  +LVFPN  +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180

Query: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMDSS 240
           EGS+   GEP+EHGIITS+T G MSVDDY  C+E GRAAT  +SAF R++ Q      SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239

Query: 241 KAG 244
           KAG
Sbjct: 241 KAG 239

The following BLAST results are available for this feature:

BLAST of CsGy2G022050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX74	5.2e-104	74.90	Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP...	[more]
Q84T68	8.1e-81	64.29	Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9NQT4	1.6e-33	36.07	Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1	[more]
Q9CRA8	6.3e-33	36.07	Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1	[more]
Q9SP08	1.0e-14	30.64	Exosome complex component RRP41 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP41...	[more]

BLAST of CsGy2G022050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150286.1	5.19e-173	99.59	exosome complex exonuclease RRP46 homolog [Cucumis sativus] >KGN62820.1 hypothet...	[more]
XP_008445020.1	1.74e-171	98.77	PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis melo] >KAA0065035....	[more]
XP_022951618.1	2.09e-163	93.42	exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exo...	[more]
XP_023002484.1	5.99e-163	93.42	exosome complex exonuclease RRP46 homolog [Cucurbita maxima]	[more]
XP_023538111.1	4.92e-162	92.59	exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G022050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLJ9	2.51e-173	99.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1	[more]
A0A5A7VGL5	8.42e-172	98.77	Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BB90	8.42e-172	98.77	exosome complex exonuclease RRP46 homolog OS=Cucumis melo OX=3656 GN=LOC10348818...	[more]
A0A6J1GI69	1.01e-163	93.42	exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KQK5	2.90e-163	93.42	exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CsGy2G022050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46210.1	3.7e-105	74.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.2	3.7e-105	74.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.3	3.7e-105	74.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.4	3.7e-105	74.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G46210.5	3.7e-105	74.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 13..133 e-value: 1.9E-25 score: 89.9
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 1..241 e-value: 3.9E-70 score: 238.0
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 136..215 e-value: 1.3E-4 score: 21.9
None	No IPR available	PANTHER	PTHR11953:SF1	EXOSOME COMPLEX COMPONENT RRP46	coord: 1..233
None	No IPR available	PANTHER	PTHR11953	EXOSOME COMPLEX COMPONENT	coord: 1..233
None	No IPR available	CDD	cd11372	RNase_PH_RRP46	coord: 14..228 e-value: 1.54609E-82 score: 243.241
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 5..163
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 133..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G022050.2	CsGy2G022050.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0034475	U4 snRNA 3'-end processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004536	deoxyribonuclease activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0003727	single-stranded RNA binding