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CsGy2G020480 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAA ATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAA ATGGCGGTGTCCACAAAACTGACGCACACAGCGGTGGTGAAGCAGATTAAGAAGCGGTGTTCCAGTTTAAGAATAGCAAAAAAGAATAAGAACAACAACAACAACAACACTCACCTCCAATGCGGCGGTGGAGAAGAGATTCCGGTGGATGTCCCCAAAGGCCATTTTGTGGTGTATGTGAGTGAGAATAGAAGCCGTTACATTGTGCCGCTTACGTTTTTAACGAGGCCGGAGTTTCAAATTCTTCTGCAATTGGCTGAGGAGGAATTTGGGTTCAGTCATAATATGGGCCTTACTATCCCTTGTGAGGAGCAAGTCTTTCAATCTCTCACTTCCATGCTTCGATAA MAVSTKLTHTAVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR* Homology
BLAST of CsGy2G020480 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32 Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.6e-21 Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of CsGy2G020480 vs. NCBI nr
Match: XP_004152658.1 (auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical protein Csa_021944 [Cucumis sativus]) HSP 1 Score: 231 bits (589), Expect = 1.98e-76 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsGy2G020480 vs. NCBI nr
Match: XP_008444786.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 212 bits (540), Expect = 6.73e-69 Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of CsGy2G020480 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida]) HSP 1 Score: 204 bits (520), Expect = 5.47e-66 Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of CsGy2G020480 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165 bits (417), Expect = 2.44e-50 Identity = 88/110 (80.00%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of CsGy2G020480 vs. NCBI nr
Match: XP_022962125.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata]) HSP 1 Score: 160 bits (404), Expect = 2.82e-48 Identity = 87/116 (75.00%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1) HSP 1 Score: 231 bits (589), Expect = 9.58e-77 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 3.26e-69 Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy TrEMBL
Match: A0A1S3BB62 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 3.26e-69 Identity = 110/117 (94.02%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1) HSP 1 Score: 160 bits (404), Expect = 1.37e-48 Identity = 87/116 (75.00%), Postives = 89/116 (76.72%), Query Frame = 0
BLAST of CsGy2G020480 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1) HSP 1 Score: 159 bits (403), Expect = 1.61e-48 Identity = 86/109 (78.90%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of CsGy2G020480 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33 Identity = 75/118 (63.56%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of CsGy2G020480 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 138.3 bits (347), Expect = 4.0e-33 Identity = 72/115 (62.61%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of CsGy2G020480 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33 Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of CsGy2G020480 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 134.4 bits (337), Expect = 5.8e-32 Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0
BLAST of CsGy2G020480 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 131.7 bits (330), Expect = 3.7e-31 Identity = 73/113 (64.60%), Postives = 83/113 (73.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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