CsGy2G020180 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G020180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Thioredoxin
Location	Gy14Chr2: 29218786 .. 29219750 (-)
RNA-Seq Expression	CsGy2G020180
Synteny	CsGy2G020180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAATGTTAAGGAATTCGACGAGCAAGTACGCATAGGAAAGGAAGCGAGAAAACTGGTATGATTTTCGCTTTTTTACGACTTTCCATTTCTACTTTCATTTGATACATTTTTTTGTATGTGATTTCGGTGGAATTTTGGATTTGATGCGTGGGCATATCGGAACATCTTTAGGGTTTCTTCTGTTGCATTATTATGGTTATTGTTAGAGTTTCTTCTGTTCGGTGATTTTGGGAAAACTCGCGATTCATTCGTTAGGGTTTCTGATATTTATGTTTGATTGTGTCTGGTTATTTGTTTAATTTCTTCAGTTTTGACTAGTTATATTTCATTTGAAATGTGGAAATTGCTAATAGGACGAATAATCGAATGTTTTGATTTTATCATTCTCTTCAATTTTTTTCGTTACTCGTTTCGTGTCTTTTTAGAACAAATCTTTGGGATATTTCTCCTTGTTATATATAGTTTCAGCTCTGTTGTTCCTGATGTTTCTAGAATTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGAGTTGGCTAAGAAGAATCCCCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGTAAAGAAATTTATCCCCTTTTCAACTTTTCCCAAACTATCGTATTATGCTCTCTTGATACAGTGGAATGGAACTGGTCTGTTGATTTGATATTTTCTTTCTCTCTCTCTCTCTCAAACAATGGCTCCTGTTTCTTTGCAGGCAATTGCTGCGAGGTTCAACGTTGATGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAGGATCGTCGGTGCTGACAAGAATGGGCTGATGGACAAGGTAATTGAGTTGTGCGGTCCAGTTCCATCAACTTCTACTGCATAA

mRNA sequence

ATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAATGTTAAGGAATTCGACGAGCAAGTACGCATAGGAAAGGAAGCGAGAAAACTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGAGTTGGCTAAGAAGAATCCCCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCAACGTTGATGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAGGATCGTCGGTGCTGACAAGAATGGGCTGATGGACAAGGTAATTGAGTTGTGCGGTCCAGTTCCATCAACTTCTACTGCATAA

Coding sequence (CDS)

ATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAATGTTAAGGAATTCGACGAGCAAGTACGCATAGGAAAGGAAGCGAGAAAACTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGAGTTGGCTAAGAAGAATCCCCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCAACGTTGATGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAGGATCGTCGGTGCTGACAAGAATGGGCTGATGGACAAGGTAATTGAGTTGTGCGGTCCAGTTCCATCAACTTCTACTGCATAA

Protein sequence

MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIFLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPSTSTA*

Homology

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BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 2   AEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIF 61
           +EEGQV G H V+E++E  + G E +KL+VVDFTASWC PCRFIAPI A++AKK PH IF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPSTS 121
           LKVDVDE++ ++A ++V+AMPTF F++D  EV   R+VGA K  L   +++   P   T+
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVD--RVVGAKKEELQQTIVKHAAPATVTA 126

[Close]

BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 64/122 (52.46%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 2   AEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIF 61
           AEEG VI  HN  EFD Q+   KEA K++++DFTASWC PCRFIAP+FAE AKK P A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPSTS 121
           LKVDVDE++ +A ++NV+AMPTF F++D  E  + ++VGA K+ L + +++  G   +++
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 TA 124
           +A
Sbjct: 123 SA 122

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BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 64/122 (52.46%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 2   AEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIF 61
           AEEG VI  HN  EFD Q+   KEA K++++DFTASWC PCRFIAP+FAE AKK P A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPSTS 121
           LKVDVDE++ +A ++NV+AMPTF F++D  E  + ++VGA K+ L + +++  G   +++
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 TA 124
           +A
Sbjct: 123 SA 122

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BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.3e-30
Identity = 61/119 (51.26%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MA EG+VI  H ++ ++E+V+   E++KLIV+DFTASWCPPCRFIAP+FAE+AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPS 120
           F K+DVDE+QA+A  F V+AMPTF F+++   +   R+VGA K+ + +K+++  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]

BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.0e-28
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIG+H V  ++E ++ G + +KLIVVDFTASWC PC+FIA  +AELAKK P   
Sbjct: 1   MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVT 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDE++++A  + V+AMPTF F+++   V   ++VGA K+ L   + +    + ST
Sbjct: 61  FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVD--KVVGAKKDELQQTIAK---HISST 118

Query: 121 STA 124
           STA
Sbjct: 121 STA 118

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BLAST of CsGy2G020180 vs. NCBI nr
Match: XP_004152672.3 (thioredoxin H1 [Cucumis sativus] >KAE8652116.1 hypothetical protein Csa_022569 [Cucumis sativus])

HSP 1 Score: 248 bits (634), Expect = 4.89e-83
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

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BLAST of CsGy2G020180 vs. NCBI nr
Match: XP_004152675.2 (thioredoxin H1-like [Cucumis sativus] >KGN62637.1 hypothetical protein Csa_021900 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 3.41e-65
Identity = 100/123 (81.30%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASWCPPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQAIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 STA 123
             A
Sbjct: 121 PKA 123

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BLAST of CsGy2G020180 vs. NCBI nr
Match: XP_008444760.1 (PREDICTED: thioredoxin H-type 1 [Cucumis melo])

HSP 1 Score: 190 bits (482), Expect = 7.39e-60
Identity = 97/123 (78.86%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIH+V+EFD  V  GKE  KLIVVDFTASWCPPCRFIAP+FAELAK  PH I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQ IAARF V+AMPTFAFV+D  EVS  RIVGADK GL   V ELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

Query: 121 STA 123
           S A
Sbjct: 121 SVA 123

[Close]

BLAST of CsGy2G020180 vs. NCBI nr
Match: KAA0065199.1 (thioredoxin H-type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 1.98e-58
Identity = 96/121 (79.34%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIH+V+EFD  V  GKE  KLIVVDFTASWCPPCRFIAP+FAELAK  PH I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQ IAARF V+AMPTFAFV+D  EVS+ RIVGADK GL   V ELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSARRIVGADKVGLGRNVSELCGPVPST 120

[Close]

BLAST of CsGy2G020180 vs. NCBI nr
Match: XP_038884374.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 163 bits (413), Expect = 2.40e-49
Identity = 83/123 (67.48%), Postives = 99/123 (80.49%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIH V+EFD  V++G EA KLIVVDFTASWCPPCRFIAPIFAELAK N + I
Sbjct: 1   MAEEGQVIGIHKVEEFDTLVKLGNEAGKLIVVDFTASWCPPCRFIAPIFAELAKANVNVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEV+ IA ++ V+AMPTF F++DE E+  HRIVGADK  L +KV EL     ++
Sbjct: 61  FLKVDVDEVKEIAEKYGVNAMPTFVFLKDENEI--HRIVGADKVQLGNKVAELARSAAAS 120

Query: 121 STA 123
           +T+
Sbjct: 121 ATS 121

[Close]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL
Match: A0A0A0LLJ2 (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G362505 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 6.54e-81
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASW PPCRFIAPIFAELAKKNPHAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWRPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEV+AIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST
Sbjct: 61  FLKVDVDEVRAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 STA 123
           STA
Sbjct: 121 STA 123

[Close]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL
Match: A0A0A0LPD3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362500 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 1.65e-65
Identity = 100/123 (81.30%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASWCPPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQAIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 STA 123
             A
Sbjct: 121 PKA 123

[Close]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL
Match: A0A1S3BBV0 (thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 3.58e-60
Identity = 97/123 (78.86%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIH+V+EFD  V  GKE  KLIVVDFTASWCPPCRFIAP+FAELAK  PH I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQ IAARF V+AMPTFAFV+D  EVS  RIVGADK GL   V ELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

Query: 121 STA 123
           S A
Sbjct: 121 SVA 123

[Close]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL
Match: A0A5A7VIA6 (Thioredoxin H-type 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005360 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 9.59e-59
Identity = 96/121 (79.34%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIGIH+V+EFD  V  GKE  KLIVVDFTASWCPPCRFIAP+FAELAK  PH I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEVQ IAARF V+AMPTFAFV+D  EVS+ RIVGADK GL   V ELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSARRIVGADKVGLGRNVSELCGPVPST 120

[Close]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL
Match: A0A6J1CST8 (thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV=1)

HSP 1 Score: 156 bits (395), Expect = 6.40e-47
Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MAEEGQVIG+HNV+ FD+ ++ G E+ KLIVVDFTASWCPPCRFIAPIFAELAK +   I
Sbjct: 1   MAEEGQVIGVHNVEAFDDLLKKGTESGKLIVVDFTASWCPPCRFIAPIFAELAKAHIGVI 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120
           FLKVDVDEV+ ++ +F V AMPTF F+++  EV + RIVGADK  L  +V+ L  P  +T
Sbjct: 61  FLKVDVDEVKEVSEKFEVTAMPTFVFLKEGAEVKNSRIVGADKVELGKRVLALSAPAAAT 120

Query: 121 STA 123
           S A
Sbjct: 121 SAA 123

[Close]

BLAST of CsGy2G020180 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 131.3 bits (329), Expect = 5.2e-31
Identity = 61/119 (51.26%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MA EG+VI  H ++ ++E+V+   E++KLIV+DFTASWCPPCRFIAP+FAE+AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPS 120
           F K+DVDE+QA+A  F V+AMPTF F+++   +   R+VGA K+ + +K+++  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]

BLAST of CsGy2G020180 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 2   AEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKK-NPHAI 61
           AEEGQVIG H    +  Q+   KE+ KLIV+DFTASWCPPCR IAPIF +LAKK    AI
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCG 116
           F KVDVDE+Q++A  F V+AMPTF F++    V   ++VGA+K  L  K+++  G
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVD--KLVGANKEDLQAKIVKHTG 115

[Close]

BLAST of CsGy2G020180 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 121.3 bits (303), Expect = 5.4e-28
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60
           MA EG+VI  H V+++ E+++   E++KLIV+DFTA+WCPPCRFIAP+FA+LAKK+   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLM 108
           F KVDVDE+  +A  F V AMPTF F++ E E+    +VGA K  ++
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMK-EGEI-KETVVGAAKEEII 105

[Close]

BLAST of CsGy2G020180 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 117.9 bits (294), Expect = 6.0e-27
Identity = 54/109 (49.54%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 2   AEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIF 61
           +EEGQVI  H V+ ++EQ++   E++ L+VVDFTASWC PCRFIAP FA+LAKK P+ +F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKV 111
           LKVD DE++++A+ + + AMPTF F+++   +   ++VGA K+ L   +
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILD--KVVGAKKDELQSTI 109

[Close]

BLAST of CsGy2G020180 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-24
Identity = 44/109 (40.37%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 4   EGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAIFLK 63
           +G+VI IH+  E + + +  K+A +L+++ FTA+WC PCR+++P+++ LA ++   +FLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIE 113
           VD+D+   +AA +N+ ++PTF F+RD  EV   ++VGADK  L  K+ +
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVD--KVVGADKGSLEQKIAQ 375

The following BLAST results are available for this feature:

BLAST of CsGy2G020180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29449	1.2e-32	54.17	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q0D840	2.1e-32	52.46	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	2.1e-32	52.46	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
Q39241	7.3e-30	51.26	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
Q07090	9.0e-28	52.03	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]

BLAST of CsGy2G020180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152672.3	4.89e-83	100.00	thioredoxin H1 [Cucumis sativus] >KAE8652116.1 hypothetical protein Csa_022569 [...	[more]
XP_004152675.2	3.41e-65	81.30	thioredoxin H1-like [Cucumis sativus] >KGN62637.1 hypothetical protein Csa_02190...	[more]
XP_008444760.1	7.39e-60	78.86	PREDICTED: thioredoxin H-type 1 [Cucumis melo]	[more]
KAA0065199.1	1.98e-58	79.34	thioredoxin H-type 1 [Cucumis melo var. makuwa]	[more]
XP_038884374.1	2.40e-49	67.48	thioredoxin H-type-like [Benincasa hispida]	[more]

BLAST of CsGy2G020180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLJ2	6.54e-81	98.37	Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G362505 PE=4 SV=1	[more]
A0A0A0LPD3	1.65e-65	81.30	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362500...	[more]
A0A1S3BBV0	3.58e-60	78.86	thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1	[more]
A0A5A7VIA6	9.59e-59	79.34	Thioredoxin H-type 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G...	[more]
A0A6J1CST8	6.40e-47	62.60	thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV...	[more]

BLAST of CsGy2G020180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45145.1	5.2e-31	51.26	thioredoxin H-type 5	[more]
AT1G19730.1	3.2e-28	54.78	Thioredoxin superfamily protein	[more]
AT5G42980.1	5.4e-28	52.34	thioredoxin 3	[more]
AT3G51030.1	6.0e-27	49.54	thioredoxin H-type 1	[more]
AT3G17880.1	2.1e-24	40.37	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 77..88 score: 32.69 coord: 30..38 score: 53.21 coord: 38..47 score: 58.56
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..116 e-value: 3.3E-33 score: 116.2
None	No IPR available	PANTHER	PTHR10438:SF399	THIOREDOXIN	coord: 1..118
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 14..110 e-value: 1.74366E-32 score: 107.644
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 11..108 e-value: 1.5E-23 score: 82.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..123 score: 12.733473
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G020180.2	CsGy2G020180.2	mRNA