CsGy2G019240 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G019240
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionsuccinate dehydrogenase subunit 5, mitochondrial
LocationGy14Chr2: 28696074 .. 28697881 (-)
RNA-Seq ExpressionCsGy2G019240
SyntenyCsGy2G019240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCATTTCGAACAGCCTCCGCTCTCTGAGTTAGCTTTTAATTTTGCAGTTTCAAGGTAAAGAGGGAAAGTCATGGAGAAAACTGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTGCTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTCCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGGTACGCTTCTTAATTAGTTATTTTTCTTTCATAGATTTAAATCTTTCCTGATTAATTTGGAAGGAAGCGGAATTCCTTGTTCGCTATTCTTTGATCAACTTAATAAATGCTAGCTATTGAGCTTTTTTCTCACGATTGCCGATATGCTTGTGTATTACTCGTGATTAGTTAAATGTATGGTTCTTCTTCCATGAAGTACACATACAGATTTAGTTCTTCCAATTTAAAGTATTGCTCGCTGTATTCGTTTAGTAAATTGCTACATTATTTTCTGTATTAATATCTATCATCAGGTCAATTGTGCGACGAGTCTTTATAGTGCGCGCAGTGTGCTTTTTCTGTGAAATGCCAAACTTCTCCTTATCGTAACTTTAAGCAATGTCTTTGTCTCAAAGAATCTTAACAAAACCAATTTCGTATGTGAGGCCAAGGAATATCAAGTAAAATATTAAAATTCATTTACCATTGTATTTTATTATTTCAGGTCGCCATGGTGATCTGATTGTATGAACAATGTAGATACACTCAATTAAATTCTTATTTCTGCATTTTAATGTTTGAAAATATATCATATACCTGTCTCTGGTAAATTTCTGCAGATTGTAGCTATCCATCTGGTGTAGGGCACGCTAGATATTTTAGTGCTGATGTAGTTAGCATGCCCACAATTGAAGATCCCAAGCTTCAGAACGTTTTCAAGGATTTAATGGCTGCAAGTTGGGATAAGCTTCCTGAGGCGGTTATTTATGATGTAAAGACCGCGTTGTCTGGAAGCACTGATGATAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCGGCTGAGGAGTTTGGGGATATGCTTATCAATTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGGTATTGGACTTACAGATTTATCATTTTGTATTTTTTTTTTTGCCAGTTGTTTATAATGTAAAAACTTCTGAGACAATCTGCAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAAGGCATTACATACGGTTCATGAACGCTATATAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAACAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTAAGAAGCCTTTCTGCTTTGTAGTTTCTAAGTTGCTATTTTTAAACATTTAAGTTGGTGAATTAAATATAGCCCATTAGGCAAATACAATTGCCAACTTAGAATCCTTGCACCATTACATTATAAAAGAGTGGAGTCTTTTGATCACAATATGTTAATTTTGAACTGGTAAGAAAGCTTATATGGGAACACTGGGCTAGGAGTTTGGTGACTCATCCTTGTTTACTTTTATAAACCCTGCAGATTAATACATGTTCAGCTATAATAATTTAATCATATACTTGCATTGGAAAGAGTTAACGCTTTTGTTATTCTAATTATAATAAATGGCTTTTCTTTTTTAAAATTTAATAAACGAATTTGATCATTTGTTTGTTAACCATGCC

mRNA sequence

GTCATTTCGAACAGCCTCCGCTCTCTGAGTTAGCTTTTAATTTTGCAGTTTCAAGGTAAAGAGGGAAAGTCATGGAGAAAACTGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTGCTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTCCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTAGCTATCCATCTGGTGTAGGGCACGCTAGATATTTTAGTGCTGATGTAGTTAGCATGCCCACAATTGAAGATCCCAAGCTTCAGAACGTTTTCAAGGATTTAATGGCTGCAAGTTGGGATAAGCTTCCTGAGGCGGTTATTTATGATGTAAAGACCGCGTTGTCTGGAAGCACTGATGATAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCGGCTGAGGAGTTTGGGGATATGCTTATCAATTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAAGGCATTACATACGGTTCATGAACGCTATATAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAACAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTAAGAAGCCTTTCTGCTTTGTAGTTTCTAAGTTGCTATTTTTAAACATTTAAGTTGGTGAATTAAATATAGCCCATTAGGCAAATACAATTGCCAACTTAGAATCCTTGCACCATTACATTATAAAAGAGTGGAGTCTTTTGATCACAATATGTTAATTTTGAACTGGTAAGAAAGCTTATATGGGAACACTGGGCTAGGAGTTTGGTGACTCATCCTTGTTTACTTTTATAAACCCTGCAGATTAATACATGTTCAGCTATAATAATTTAATCATATACTTGCATTGGAAAGAGTTAACGCTTTTGTTATTCTAATTATAATAAATGGCTTTTCTTTTTTAAAATTTAATAAACGAATTTGATCATTTGTTTGTTAACCATGCC

Coding sequence (CDS)

ATGGAGAAAACTGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTGCTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTCCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTAGCTATCCATCTGGTGTAGGGCACGCTAGATATTTTAGTGCTGATGTAGTTAGCATGCCCACAATTGAAGATCCCAAGCTTCAGAACGTTTTCAAGGATTTAATGGCTGCAAGTTGGGATAAGCTTCCTGAGGCGGTTATTTATGATGTAAAGACCGCGTTGTCTGGAAGCACTGATGATAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCGGCTGAGGAGTTTGGGGATATGCTTATCAATTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAAGGCATTACATACGGTTCATGAACGCTATATAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAACAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTAAGAAGCCTTTCTGCTTTGTAG

Protein sequence

MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSDCSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSLSAL*
Homology
[Close]
BLAST of CsGy2G019240 vs. ExPASy Swiss-Prot
Match: Q9SX77 (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.1e-58
Identity = 121/220 (55.00%), Postives = 149/220 (67.73%), Query Frame = 0 

Query: 28  NLLQSNHQVARSFFYLSSHRPSFSDSPQ------------------RVSSDCSYP--SGV 87
           +LLQ +H + +   +LS HR   + +P                    VS D  YP   G+
Sbjct: 27  SLLQGSHHIEK---HLSRHRTLITVAPNASVIGDVQINKGSFISYASVSRDLQYPRAMGM 86

Query: 88  GHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEI 147
           G  R FS DV  MP +ED  + N FKDLMAA W +LP AV+ D KTA+S +TDDKAG+E 
Sbjct: 87  GQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEA 146

Query: 148 VENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDS 207
           ++NVFRAAEA EEFG +L ++KMEIDDSIG+SGE VKPL +++  AL T ++RY  YLDS
Sbjct: 147 LKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDS 206

Query: 208 FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 228
           F PEE YL+KKVE ELGTKMI+LKMRCSGLGSEWGKV  L
Sbjct: 207 FEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVL 243

[Close]
BLAST of CsGy2G019240 vs. ExPASy Swiss-Prot
Match: Q0JDA2 (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.1e-50
Identity = 92/154 (59.74%), Postives = 123/154 (79.87%), Query Frame = 0 

Query: 71  RYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVEN 130
           R FS++   +P I DP++++ FKDLMAASW  LP++++ + K A S +TDDKAGKE + N
Sbjct: 61  RLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLN 120

Query: 131 VFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGP 190
           VFRAAEA EEFG +L+ L+M +DD  G++GENV PL   ++ A+ + ++RY+ YL+SFGP
Sbjct: 121 VFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGP 180

Query: 191 EENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV 225
           EENYLRKKVE ELGTKMI+LKMRCSG+GSEWGK+
Sbjct: 181 EENYLRKKVENELGTKMIHLKMRCSGVGSEWGKI 214

[Close]
BLAST of CsGy2G019240 vs. NCBI nr
Match: XP_004152731.1 (succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 hypothetical protein Csa_021793 [Cucumis sativus])

HSP 1 Score: 444 bits (1141), Expect = 1.18e-156
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. NCBI nr
Match: XP_008444638.1 (PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 417 bits (1071), Expect = 5.51e-146
Identity = 212/227 (93.39%), Postives = 216/227 (95.15%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARS FYLSSHR SFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSVFYLSSHRSSFSDSPQRVSYD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           CSYPSGVGHARYFSADVVSMP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKEIVENVFRAA AAEEFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+R
Sbjct: 121 DKAGKEIVENVFRAAVAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. NCBI nr
Match: XP_038884886.1 (succinate dehydrogenase subunit 5, mitochondrial [Benincasa hispida])

HSP 1 Score: 388 bits (996), Expect = 1.48e-134
Identity = 194/227 (85.46%), Postives = 209/227 (92.07%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEK VILRSLLRSVRARSY IAGVT+RNLLQSNHQ ARSFFYLSSHR SFSDSPQ+VSSD
Sbjct: 1   MEKMVILRSLLRSVRARSYAIAGVTYRNLLQSNHQAARSFFYLSSHRSSFSDSPQKVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           C Y SGVGHAR+FS DVVSMPTI D  L+N FKDLMAASWDKLPE+++YDVK AL+GSTD
Sbjct: 61  CGYLSGVGHARFFSVDVVSMPTIGDSNLRNAFKDLMAASWDKLPESLVYDVKAALTGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKEIVENVFRAAEAAEEFG +LI++KMEIDDSIGLSGE+VKP+SDELK AL TVH+R
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGGILISMKMEIDDSIGLSGEDVKPVSDELKNALRTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           Y+ YLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YVTYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. NCBI nr
Match: KAG6598386.1 (Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375 bits (964), Expect = 9.94e-130
Identity = 190/223 (85.20%), Postives = 204/223 (91.48%), Query Frame = 0 

Query: 5   VILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSDCSYP 64
           VILRSLLRSVRARSY IAGVTHRNLLQS+HQ ARSFF LSSHR SFSD P RVSSDC Y 
Sbjct: 2   VILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSDCGYL 61

Query: 65  SGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAG 124
           SGV HAR+FS DVV+MPTI D KLQN FKDLMAASWD LPE+V+YDVK ALSGST+DKAG
Sbjct: 62  SGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKAG 121

Query: 125 KEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAY 184
           KEIVENVFRAAEAAE+FGD+L+NLKMEIDDSIG+SGE+VKPLSDELKKAL TV++RY AY
Sbjct: 122 KEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTAY 181

Query: 185 LDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           LD+FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 182 LDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 224

[Close]
BLAST of CsGy2G019240 vs. NCBI nr
Match: XP_022144354.1 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 375 bits (964), Expect = 1.11e-129
Identity = 187/227 (82.38%), Postives = 202/227 (88.99%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEK +ILRSLLRSVR  SYG+AGV HRNLLQS+HQ ARS F+LSSHR S SDS QRVSSD
Sbjct: 1   MEKMMILRSLLRSVRVGSYGVAGVRHRNLLQSHHQAARSLFHLSSHRSSVSDSLQRVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           C YPSGVG  R+FS DVV MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTD
Sbjct: 61  CGYPSGVGRVRFFSVDVVHMPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKE+VENVFRAAEA EEFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+R
Sbjct: 121 DKAGKEVVENVFRAAEAVEEFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           Y  YLD+FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YTTYLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match: A0A0A0LP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 5.72e-157
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER
Sbjct: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match: A0A1S3BAR6 (succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487909 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.67e-146
Identity = 212/227 (93.39%), Postives = 216/227 (95.15%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARS FYLSSHR SFSDSPQRVS D
Sbjct: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSVFYLSSHRSSFSDSPQRVSYD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           CSYPSGVGHARYFSADVVSMP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTD
Sbjct: 61  CSYPSGVGHARYFSADVVSMPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKEIVENVFRAA AAEEFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+R
Sbjct: 121 DKAGKEIVENVFRAAVAAEEFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match: A0A6J1CS25 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014059 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 5.35e-130
Identity = 187/227 (82.38%), Postives = 202/227 (88.99%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEK +ILRSLLRSVR  SYG+AGV HRNLLQS+HQ ARS F+LSSHR S SDS QRVSSD
Sbjct: 1   MEKMMILRSLLRSVRVGSYGVAGVRHRNLLQSHHQAARSLFHLSSHRSSVSDSLQRVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           C YPSGVG  R+FS DVV MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTD
Sbjct: 61  CGYPSGVGRVRFFSVDVVHMPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKE+VENVFRAAEA EEFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+R
Sbjct: 121 DKAGKEVVENVFRAAEAVEEFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           Y  YLD+FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 181 YTTYLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match: A0A6J1C282 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007602 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 2.53e-128
Identity = 187/227 (82.38%), Postives = 201/227 (88.55%), Query Frame = 0 

Query: 1   MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSD 60
           MEK VILRSLLRSVR  SYG+AGV HRNLLQS+HQ ARSFFYLSSHR S SD PQRVSSD
Sbjct: 1   MEKMVILRSLLRSVRVGSYGVAGVRHRNLLQSHHQAARSFFYLSSHRSSLSDFPQRVSSD 60

Query: 61  CSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTD 120
           C Y SGVG AR FS DVV M TIED KLQNVFKDLMA SWD+LP +V+YDVK ALSGSTD
Sbjct: 61  CCYLSGVGRARLFSVDVVRMATIEDSKLQNVFKDLMATSWDELPNSVVYDVKAALSGSTD 120

Query: 121 DKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHER 180
           DKAGKE+VENVFRAAEA EEFG +LI+LKM+IDDSIGLSGE+VKPLSDELK ALHTVH+R
Sbjct: 121 DKAGKEVVENVFRAAEAVEEFGGILISLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDR 180

Query: 181 YIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           Y  YLD+FGPEENYLRKKVET+LGTKMIYLK+RCSGLGSEWGKV  L
Sbjct: 181 YTTYLDAFGPEENYLRKKVETDLGTKMIYLKIRCSGLGSEWGKVSVL 227

[Close]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match: A0A6J1HCU3 (succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111462814 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 3.35e-128
Identity = 190/224 (84.82%), Postives = 204/224 (91.07%), Query Frame = 0 

Query: 5   VILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSS-DCSY 64
           VILRSLLRSVRARSY IAGVTHRNLLQS+HQ ARSFF LSSHR SFSD P RVSS DC Y
Sbjct: 2   VILRSLLRSVRARSYVIAGVTHRNLLQSHHQAARSFFSLSSHRSSFSDFPPRVSSADCGY 61

Query: 65  PSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKA 124
            SGV HAR+FS DVV+MPTI D KLQN FKDLMAASWD LPE+V+YDVK ALSGST+DKA
Sbjct: 62  LSGVAHARFFSVDVVNMPTIGDTKLQNAFKDLMAASWDNLPESVVYDVKAALSGSTEDKA 121

Query: 125 GKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIA 184
           GKEIVENVFRAAEAAE+FGD+L+NLKMEIDDSIG+SGE+VKPLSDELKKAL TV++RY A
Sbjct: 122 GKEIVENVFRAAEAAEDFGDILVNLKMEIDDSIGVSGEDVKPLSDELKKALQTVYDRYTA 181

Query: 185 YLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 227
           YLD+FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKV  L
Sbjct: 182 YLDAFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVL 225

[Close]
BLAST of CsGy2G019240 vs. TAIR 10
Match: AT1G47420.1 (succinate dehydrogenase 5 )

HSP 1 Score: 224.9 bits (572), Expect = 6.5e-59
Identity = 121/220 (55.00%), Postives = 149/220 (67.73%), Query Frame = 0 

Query: 28  NLLQSNHQVARSFFYLSSHRPSFSDSPQ------------------RVSSDCSYP--SGV 87
           +LLQ +H + +   +LS HR   + +P                    VS D  YP   G+
Sbjct: 27  SLLQGSHHIEK---HLSRHRTLITVAPNASVIGDVQINKGSFISYASVSRDLQYPRAMGM 86

Query: 88  GHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEI 147
           G  R FS DV  MP +ED  + N FKDLMAA W +LP AV+ D KTA+S +TDDKAG+E 
Sbjct: 87  GQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEA 146

Query: 148 VENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDS 207
           ++NVFRAAEA EEFG +L ++KMEIDDSIG+SGE VKPL +++  AL T ++RY  YLDS
Sbjct: 147 LKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDS 206

Query: 208 FGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVRSL 228
           F PEE YL+KKVE ELGTKMI+LKMRCSGLGSEWGKV  L
Sbjct: 207 FEPEEVYLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVL 243

The following BLAST results are available for this feature:
BLAST of CsGy2G019240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SX779.1e-5855.00Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q0JDA24.1e-5059.74Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of CsGy2G019240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152731.11.18e-15699.12succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 h... [more]
XP_008444638.15.51e-14693.39PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo][more]
XP_038884886.11.48e-13485.46succinate dehydrogenase subunit 5, mitochondrial [Benincasa hispida][more]
KAG6598386.19.94e-13085.20Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperm... [more]
XP_022144354.11.11e-12982.38succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 [Momordica char... [more]
BLAST of CsGy2G019240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP605.72e-15799.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1[more]
A0A1S3BAR62.67e-14693.39succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1CS255.35e-13082.38succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica ch... [more]
A0A6J1C2822.53e-12882.38succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica ch... [more]
A0A6J1HCU33.35e-12884.82succinate dehydrogenase subunit 5, mitochondrial-like OS=Cucurbita moschata OX=3... [more]
BLAST of CsGy2G019240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47420.16.5e-5955.00succinate dehydrogenase 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPFAMPF14290DUF4370coord: 1..227
e-value: 2.8E-93
score: 312.1
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPANTHERPTHR36139SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..227
NoneNo IPR availablePANTHERPTHR36139:SF1SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G019240.2CsGy2G019240.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0045273 respiratory chain complex II