![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CsGy2G018580 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAAAACGCTTTAAATACCCTTCAAAATCACCCAAAAGATCTCACACTACAATTTGCCTTAGTTTGTTGTTCCTCAAGAAAATGAAGTTCCTTCATCTTCTTACTTGGCTTCTCCTTCTCACCTCCTTCCTGGAGCTCTCATTGGGTGCCCCAGGTAAAGAAATTAATTAACGTTTGAAACTGAACAACAACATCATATCATTAATTTTATTGTAAAGATTATAACGTACGGTTTTTTTATTTGTTTTGTGTGTGAAAGGTTTCTGCGGTTGGAAATGTAGAAGGAGATGTTCCAAAGCTGGGGTGCGAGATAGGTGCATGAAGTACTGTGGGATATGCTGTGAGAAATGTGGGTGTGTGCCGTCCGGGACTTATGGGAATAAACACGAATGCCCTTGCTATGGGAACTTGAAGAACTCCAAGGGCAACTCCAAATGTCCTTAATTACATTAAACCCTAAACCAGCCTTTACTTTATTGCCTTTTCCCAACCTATGTTTCCTTCTGTACGAACCCTTCTTACTTTGACTAAATGAAATATATATTTACTTCTCTCCAACTATATCTATCTAGACTTGTATGAAATTTACAATACC GAAAAAAAAACGCTTTAAATACCCTTCAAAATCACCCAAAAGATCTCACACTACAATTTGCCTTAGTTTGTTGTTCCTCAAGAAAATGAAGTTCCTTCATCTTCTTACTTGGCTTCTCCTTCTCACCTCCTTCCTGGAGCTCTCATTGGGTGCCCCAGGTTTCTGCGGTTGGAAATGTAGAAGGAGATGTTCCAAAGCTGGGGTGCGAGATAGGTGCATGAAGTACTGTGGGATATGCTGTGAGAAATGTGGGTGTGTGCCGTCCGGGACTTATGGGAATAAACACGAATGCCCTTGCTATGGGAACTTGAAGAACTCCAAGGGCAACTCCAAATGTCCTTAATTACATTAAACCCTAAACCAGCCTTTACTTTATTGCCTTTTCCCAACCTATGTTTCCTTCTGTACGAACCCTTCTTACTTTGACTAAATGAAATATATATTTACTTCTCTCCAACTATATCTATCTAGACTTGTATGAAATTTACAATACC ATGAAGTTCCTTCATCTTCTTACTTGGCTTCTCCTTCTCACCTCCTTCCTGGAGCTCTCATTGGGTGCCCCAGGTTTCTGCGGTTGGAAATGTAGAAGGAGATGTTCCAAAGCTGGGGTGCGAGATAGGTGCATGAAGTACTGTGGGATATGCTGTGAGAAATGTGGGTGTGTGCCGTCCGGGACTTATGGGAATAAACACGAATGCCCTTGCTATGGGAACTTGAAGAACTCCAAGGGCAACTCCAAATGTCCTTAA MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPSGTYGNKHECPCYGNLKNSKGNSKCP* Homology
BLAST of CsGy2G018580 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-26 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.2e-24 Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-23 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-23 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy Swiss-Prot
Match: C0HLQ1 (Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22 Identity = 43/59 (72.88%), Postives = 46/59 (77.97%), Query Frame = 0
BLAST of CsGy2G018580 vs. NCBI nr
Match: XP_004142881.1 (peamaclein [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_018588 [Cucumis sativus]) HSP 1 Score: 190 bits (482), Expect = 4.66e-61 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy2G018580 vs. NCBI nr
Match: XP_008444582.1 (PREDICTED: peamaclein-like [Cucumis melo]) HSP 1 Score: 187 bits (475), Expect = 5.46e-60 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CsGy2G018580 vs. NCBI nr
Match: XP_038885998.1 (peamaclein-like [Benincasa hispida]) HSP 1 Score: 161 bits (407), Expect = 1.61e-49 Identity = 71/85 (83.53%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CsGy2G018580 vs. NCBI nr
Match: XP_022961995.1 (peamaclein-like [Cucurbita moschata] >KAG7029319.1 Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159 bits (401), Expect = 1.07e-48 Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CsGy2G018580 vs. NCBI nr
Match: XP_023546651.1 (peamaclein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157 bits (396), Expect = 6.22e-48 Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy TrEMBL
Match: A0A0A0LKN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=3 SV=1) HSP 1 Score: 190 bits (482), Expect = 2.26e-61 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy TrEMBL
Match: A0A1S3BAP8 (peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103487854 PE=3 SV=1) HSP 1 Score: 187 bits (475), Expect = 2.64e-60 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy TrEMBL
Match: A0A6J1HDT0 (peamaclein-like OS=Cucurbita moschata OX=3662 GN=LOC111462598 PE=3 SV=1) HSP 1 Score: 159 bits (401), Expect = 5.20e-49 Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy TrEMBL
Match: A0A6J1K7T2 (peamaclein-like OS=Cucurbita maxima OX=3661 GN=LOC111492448 PE=3 SV=1) HSP 1 Score: 154 bits (388), Expect = 5.01e-47 Identity = 68/85 (80.00%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of CsGy2G018580 vs. ExPASy TrEMBL
Match: A0A6J1BV69 (peamaclein-like OS=Momordica charantia OX=3673 GN=LOC111005017 PE=3 SV=1) HSP 1 Score: 142 bits (357), Expect = 2.94e-42 Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of CsGy2G018580 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein ) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CsGy2G018580 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein ) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of CsGy2G018580 vs. TAIR 10
Match: AT1G10588.1 (Gibberellin-regulated family protein ) HSP 1 Score: 100.9 bits (250), Expect = 5.2e-22 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 0
BLAST of CsGy2G018580 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein ) HSP 1 Score: 100.9 bits (250), Expect = 5.2e-22 Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0
BLAST of CsGy2G018580 vs. TAIR 10
Match: AT1G10588.2 (Gibberellin-regulated family protein ) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21 Identity = 48/77 (62.34%), Postives = 55/77 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|