CsGy2G017520 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G017520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	VQ motif-containing protein 20-like
Location	Gy14Chr2: 27529861 .. 27530574 (+)
RNA-Seq Expression	CsGy2G017520
Synteny	CsGy2G017520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCTCAACAACAGCAACAAATTCATGGAAAGAGGGATAATCAAACCAACAACAATGCCAATAAACCATTGTCTCCACCGCCGTTATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCTTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCCTCTTCCACTACCTCTCTTCTCAATGGCGTTATTCCCACCGCTGCCGCTAAGCCGCCTCAACGACATCCAGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGTCGATGAGAATAATAAAGCATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTGTGACGACGGATGAAAATTGCTGTGGTGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAAGTTAATTCGTGTTTTGGTCCGGCGATTTTTGAGCCACCGCCACCACCACCTCCGCCACAACTGGCGAGTTCTTACCTATCGAATATCCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGCGTTAGTGATTTTAGCGAATTTTAG

mRNA sequence

ATGAGTCCTCAACAACAGCAACAAATTCATGGAAAGAGGGATAATCAAACCAACAACAATGCCAATAAACCATTGTCTCCACCGCCGTTATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCTTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCCTCTTCCACTACCTCTCTTCTCAATGGCGTTATTCCCACCGCTGCCGCTAAGCCGCCTCAACGACATCCAGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGTCGATGAGAATAATAAAGCATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTGTGACGACGGATGAAAATTGCTGTGGTGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAAGTTAATTCGTGTTTTGGTCCGGCGATTTTTGAGCCACCGCCACCACCACCTCCGCCACAACTGGCGAGTTCTTACCTATCGAATATCCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGCGTTAGTGATTTTAGCGAATTTTAG

Coding sequence (CDS)

ATGAGTCCTCAACAACAGCAACAAATTCATGGAAAGAGGGATAATCAAACCAACAACAATGCCAATAAACCATTGTCTCCACCGCCGTTATTGAAGATCAATAAGGATTCTCATTTGATTCGGAAATCTTCTTCTTCTTCCAATACTTCTTCTCCATCTTCCTCTTCCTCTTCCACTACCTCTCTTCTCAATGGCGTTATTCCCACCGCTGCCGCTAAGCCGCCTCAACGACATCCAGTGATTATATACACACATTCTCCCAAAATCATTCATACACATCCTCGAGATTTCATGGCCTTGGTTCAAAAGCTAACCGGAATGTCTCGATCTGATGATGAAGCTTCTACGAAAGCAACGGCGAAATCCGTCGTCGATGAGAATAATAAAGCATCTAAAGTTGTGAATGATGATAATGAATCGTCGTCTGTTGTGACGACGGATGAAAATTGCTGTGGTGGTAGCGGATCAAGCGGTGCGGTGGAAGGTGGTCAAGTTAATTCGTGTTTTGGTCCGGCGATTTTTGAGCCACCGCCACCACCACCTCCGCCACAACTGGCGAGTTCTTACCTATCGAATATCCCGGTTTATGGGCCGAATTCGACGGAGTTTTTGTGCGGTAATCAACCGATTTTTAACTATGATGATTCTTTGCTTTTTGGTTCCAATATTCCTTCTCTTTCGTCCAACGGCGTTAGTGATTTTAGCGAATTTTAG

Protein sequence

MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF*

Homology

[Close]

BLAST of CsGy2G017520 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.1e-29
Identity = 106/292 (36.30%), Postives = 141/292 (48.29%), Query Frame = 0


Query: 10  HGKRDNQTNNN----ANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLLNG 69
           H KR+   NN+       P   PP LK+NKDSH+I+K        SPSS SS        
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS-------- 80

Query: 70  VIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDE------------ 129
                AAKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++            
Sbjct: 81  -----AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 130 --ASTKATAKSVVDENNKASK-------------------------VVNDDNESSSVVTT 189
             +  +  ++  VD  N  ++                         ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 190 DENCCGGSGSSGAVEGGQVNSCFGPAIF--------EPPPPPPPPQL-------ASSYLS 238
           +EN           E GQVNS    +           PPPPPPPP +         +YL 
Sbjct: 201 EEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLP 260

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BLAST of CsGy2G017520 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 26  SPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLLNGVIPTAAAKPPQRHPVIIYTH 85
           S P  LK+  +SH I+K+SS  +   P   +S                     PVIIY H
Sbjct: 12  SRPSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------------PVIIYAH 71

Query: 86  SPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKSVVDENNKASKVVNDDNESS 142
           SPK+IHT   DFMALVQ+LTG+       ++++++  V +E N     V DDN ++
Sbjct: 72  SPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN-----VGDDNTAA 101

[Close]

BLAST of CsGy2G017520 vs. NCBI nr
Match: KGN62345.1 (hypothetical protein Csa_018596 [Cucumis sativus])

HSP 1 Score: 454 bits (1169), Expect = 7.31e-161
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA 120
           SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA
Sbjct: 61  SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA 120

Query: 121 KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP 180
           KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP
Sbjct: 121 KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP 180

Query: 181 PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF 237
           PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF
Sbjct: 181 PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF 237

[Close]

BLAST of CsGy2G017520 vs. NCBI nr
Match: KAA0061038.1 (VQ motif-containing protein 20-like [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1033), Expect = 4.05e-140
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP L KINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSL-KINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPP 180
           AKSV DENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FEPPPP
Sbjct: 121 AKSV-DENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180

Query: 181 PPPP--QLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFG-SNIPSLSSNGVSDFSE 237
           PPPP  QLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLFG SNIPSLSSNG+SDFSE
Sbjct: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 238

[Close]

BLAST of CsGy2G017520 vs. NCBI nr
Match: XP_008445554.1 (PREDICTED: VQ motif-containing protein 20-like [Cucumis melo])

HSP 1 Score: 402 bits (1032), Expect = 5.75e-140
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP L KINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSL-KINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPP 180
           AKSV DENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FEPPPP
Sbjct: 121 AKSV-DENNKISKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180

Query: 181 PPPP--QLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFG-SNIPSLSSNGVSDFSE 237
           PPPP  QLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLFG SNIPSLSSNG+SDFSE
Sbjct: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 238

[Close]

BLAST of CsGy2G017520 vs. NCBI nr
Match: XP_038876677.1 (VQ motif-containing protein 20 [Benincasa hispida])

HSP 1 Score: 359 bits (922), Expect = 3.50e-123
Identity = 205/247 (83.00%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MSPQQQQQIHGKRDNQT------NNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSS 60
           MSPQ QQQ+HGKRDNQ       N N NKPL PPPL KINKDSHLIRKSSSSSNTSSPSS
Sbjct: 1   MSPQPQQQLHGKRDNQNQSINNGNGNGNKPLCPPPL-KINKDSHLIRKSSSSSNTSSPSS 60

Query: 61  SSSSTTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA 120
           SSSSTTSL+NGV      KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA
Sbjct: 61  SSSSTTSLVNGV------KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEA 120

Query: 121 STKATAKSVVDENNKASK--VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPA 180
           STKAT KSV DENNK SK  VVNDDNESSSVVTTDENCCGG   SG VEGGQVNSCFG A
Sbjct: 121 STKATTKSV-DENNKGSKKAVVNDDNESSSVVTTDENCCGGG--SGVVEGGQVNSCFGAA 180

Query: 181 IFEPPPPPPPPQLASSYLSNIPVYGPNSTEFLCGNQP-IFNYDDSLLFGS-NIPSLSSNG 237
           IFEPPPPPPPPQLA+SYL+NIPVY PNSTEFLC NQP  FNYDDSLLFG+ NIPSLSSNG
Sbjct: 181 IFEPPPPPPPPQLANSYLTNIPVYRPNSTEFLCTNQPSFFNYDDSLLFGAHNIPSLSSNG 237

[Close]

BLAST of CsGy2G017520 vs. NCBI nr
Match: XP_008453685.1 (PREDICTED: VQ motif-containing protein 20 [Cucumis melo])

HSP 1 Score: 328 bits (840), Expect = 1.26e-110
Identity = 192/250 (76.80%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSN--TSSPSSSSSS 60
           MSPQQQ  IHGKRDNQ NNN NKP+  PP LKINKDSHLIRK+SSSSN  TSSPSSSSSS
Sbjct: 1   MSPQQQ--IHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSS 60

Query: 61  TTSLLNGVIPTAAA--KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EAS 120
           TTSL+NGV   AAA  KP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EAS
Sbjct: 61  TTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEAS 120

Query: 121 TK-ATAKSVVDENNKASK----VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFG 180
           TK AT K VVDENN  +K    VV+DDNESSSVVTTDENCCGG G SG +E GQVNSCFG
Sbjct: 121 TKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFG 180

Query: 181 PAIFEPPPPPP---PPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLS 237
           P IFEPPPPPP   PPQLA+SYL+NIP+Y PNS EFLC NQPIFNYDDSLLFG N     
Sbjct: 181 PVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGN----- 240

[Close]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL
Match: A0A0A0LKA6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 3.54e-161
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60
           MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT
Sbjct: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTT 60

Query: 61  SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA 120
           SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA
Sbjct: 61  SLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATA 120

Query: 121 KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP 180
           KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP
Sbjct: 121 KSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPPP 180

Query: 181 PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF 237
           PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF
Sbjct: 181 PPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF 237

[Close]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL
Match: A0A5A7V0G0 (VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001740 PE=4 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 1.96e-140
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP L KINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSL-KINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPP 180
           AKSV DENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FEPPPP
Sbjct: 121 AKSV-DENNKVSKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180

Query: 181 PPPP--QLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFG-SNIPSLSSNGVSDFSE 237
           PPPP  QLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLFG SNIPSLSSNG+SDFSE
Sbjct: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 238

[Close]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL
Match: A0A1S3BCI6 (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 402 bits (1032), Expect = 2.78e-140
Identity = 222/241 (92.12%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MSPQ-QQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSST 60
           MSPQ QQQQIHGKRDNQ NNNANKPLSPP L KINKDSHLIRKSSSSSNTSSPSSSSSST
Sbjct: 1   MSPQHQQQQIHGKRDNQINNNANKPLSPPSL-KINKDSHLIRKSSSSSNTSSPSSSSSST 60

Query: 61  TSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120
           TSL+NGV PTA AKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT
Sbjct: 61  TSLVNGV-PTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKAT 120

Query: 121 AKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPPP 180
           AKSV DENNK SKVVNDDNESSSV+TTDENCC GSGSSGAVEGGQVNSCFGPA FEPPPP
Sbjct: 121 AKSV-DENNKISKVVNDDNESSSVLTTDENCCNGSGSSGAVEGGQVNSCFGPASFEPPPP 180

Query: 181 PPPP--QLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFG-SNIPSLSSNGVSDFSE 237
           PPPP  QLA+SYL+N+PVYGPNSTEFLCGNQPIFNYDDSLLFG SNIPSLSSNG+SDFSE
Sbjct: 181 PPPPPPQLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSSNGISDFSE 238

[Close]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL
Match: A0A1S3BXM8 (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 328 bits (840), Expect = 6.10e-111
Identity = 192/250 (76.80%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MSPQQQQQIHGKRDNQTNNNANKPLSPPPLLKINKDSHLIRKSSSSSN--TSSPSSSSSS 60
           MSPQQQ  IHGKRDNQ NNN NKP+  PP LKINKDSHLIRK+SSSSN  TSSPSSSSSS
Sbjct: 1   MSPQQQ--IHGKRDNQINNNGNKPILCPPPLKINKDSHLIRKTSSSSNNTTSSPSSSSSS 60

Query: 61  TTSLLNGVIPTAAA--KPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD-EAS 120
           TTSL+NGV   AAA  KP QRHPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSDD EAS
Sbjct: 61  TTSLVNGVAAAAAAAAKPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEAS 120

Query: 121 TK-ATAKSVVDENNKASK----VVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFG 180
           TK AT K VVDENN  +K    VV+DDNESSSVVTTDENCCGG G SG +E GQVNSCFG
Sbjct: 121 TKLATTKPVVDENNNNNKGSKAVVSDDNESSSVVTTDENCCGGGGGSGMMEVGQVNSCFG 180

Query: 181 PAIFEPPPPPP---PPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLS 237
           P IFEPPPPPP   PPQLA+SYL+NIP+Y PNS EFLC NQPIFNYDDSLLFG N     
Sbjct: 181 PVIFEPPPPPPSPPPPQLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGN----- 240

[Close]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL
Match: A0A0A0LPK7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=1)

HSP 1 Score: 299 bits (765), Expect = 5.37e-100
Identity = 176/239 (73.64%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MSPQQQQQ-IHGKRDNQ-TNNNANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSS 60
           MSPQQQQQ IHGK DNQ TNN  NKP+  PP LKINKDSHLIRK+SSSSNTSSPSSSSSS
Sbjct: 1   MSPQQQQQQIHGKMDNQITNNGNNKPILCPPPLKINKDSHLIRKTSSSSNTSSPSSSSSS 60

Query: 61  TTSLLNGVIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKA 120
           TTSL NGV   AA  PPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTG+         KA
Sbjct: 61  TTSLANGVAAAAAKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGI------CCCKA 120

Query: 121 TAKSVVDENNKASKVVNDDNESSSVVTTDENCCGGSGSSGAVEGGQVNSCFGPAIFEPPP 180
                         VVNDDNESSSVVTTDENCCGG GS G +E GQVNSCFGPAIFEPPP
Sbjct: 121 A-------------VVNDDNESSSVVTTDENCCGGGGS-GLMEVGQVNSCFGPAIFEPPP 180

Query: 181 PPPPPQLASSYLSNIPVYGPNSTEFLCGNQPIFNYDDSLLFGSNIPSLSSNGVSDFSEF 237
           PPP  QLA+SYL+NIP+Y PNSTEFLC NQPIFNYDDSLLFG N    S N   ++SEF
Sbjct: 181 PPP--QLANSYLTNIPIYTPNSTEFLCTNQPIFNYDDSLLFGGN---RSVNDFCEYSEF 214

[Close]

BLAST of CsGy2G017520 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 128.6 bits (322), Expect = 6.5e-30
Identity = 106/292 (36.30%), Postives = 141/292 (48.29%), Query Frame = 0


Query: 10  HGKRDNQTNNN----ANKPLSPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLLNG 69
           H KR+   NN+       P   PP LK+NKDSH+I+K        SPSS SS        
Sbjct: 21  HPKREPNENNSGILYTPSPSPSPPTLKVNKDSHVIKK------PPSPSSFSS-------- 80

Query: 70  VIPTAAAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDDE------------ 129
                AAKP  RHPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SD++            
Sbjct: 81  -----AAKP--RHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGV 140

Query: 130 --ASTKATAKSVVDENNKASK-------------------------VVNDDNESSSVVTT 189
             +  +  ++  VD  N  ++                         ++++D+ESSSV+TT
Sbjct: 141 VKSINRTVSEPTVDRKNNRNRCGGGNNYLRNYSGAGNGKGIFFNNTMISEDSESSSVITT 200

Query: 190 DENCCGGSGSSGAVEGGQVNSCFGPAIF--------EPPPPPPPPQL-------ASSYLS 238
           +EN           E GQVNS    +           PPPPPPPP +         +YL 
Sbjct: 201 EEN---------IGEHGQVNSSLPYSAVAIPPQPPPHPPPPPPPPSMYDAAGINYGAYLP 260

[Close]

BLAST of CsGy2G017520 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0


Query: 26  SPPPLLKINKDSHLIRKSSSSSNTSSPSSSSSSTTSLLNGVIPTAAAKPPQRHPVIIYTH 85
           S P  LK+  +SH I+K+SS  +   P   +S                     PVIIY H
Sbjct: 12  SRPSSLKLAGESHTIKKTSSCKSKPRPHGRAS---------------------PVIIYAH 71

Query: 86  SPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKSVVDENNKASKVVNDDNESS 142
           SPK+IHT   DFMALVQ+LTG+       ++++++  V +E N     V DDN ++
Sbjct: 72  SPKVIHTRAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVN-----VGDDNTAA 101

[Close]

BLAST of CsGy2G017520 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 25  LSPPPL-LKINKDSH-LIRKSSSSSNTSSPSSSSSSTTSLLNGVIPTAAAKPPQRHPVII 84
           L P P+ LK+  DSH +I+K   +     P    +          P+ +  PP   PVII
Sbjct: 12  LGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQE------PSQSRPPP--GPVII 71

Query: 85  YTHSPKIIHTHPRDFMALVQKLTGMSRSDDEASTKATAKS 123
           YT SP+IIHTHP +FM LVQ+LTG + +   +S+ +++ S
Sbjct: 72  YTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTS 103

The following BLAST results are available for this feature:

BLAST of CsGy2G017520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS54	9.1e-29	36.30	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	1.4e-05	35.34	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsGy2G017520 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62345.1	7.31e-161	100.00	hypothetical protein Csa_018596 [Cucumis sativus]	[more]
KAA0061038.1	4.05e-140	92.12	VQ motif-containing protein 20-like [Cucumis melo var. makuwa]	[more]
XP_008445554.1	5.75e-140	92.12	PREDICTED: VQ motif-containing protein 20-like [Cucumis melo]	[more]
XP_038876677.1	3.50e-123	83.00	VQ motif-containing protein 20 [Benincasa hispida]	[more]
XP_008453685.1	1.26e-110	76.80	PREDICTED: VQ motif-containing protein 20 [Cucumis melo]	[more]

BLAST of CsGy2G017520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKA6	3.54e-161	100.00	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G350280 PE=4 SV=...	[more]
A0A5A7V0G0	1.96e-140	92.12	VQ motif-containing protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BCI6	2.78e-140	92.12	VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4...	[more]
A0A1S3BXM8	6.10e-111	76.80	VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1	[more]
A0A0A0LPK7	5.37e-100	73.64	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023620 PE=4 SV=...	[more]

BLAST of CsGy2G017520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18360.1	6.5e-30	36.30	VQ motif-containing protein	[more]
AT1G68450.1	1.0e-06	35.34	VQ motif-containing protein	[more]
AT1G21326.1	4.2e-05	38.00	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 84..108 e-value: 1.7E-11 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 1..237
IPR039832	VQ motif-containing protein 20	PANTHER	PTHR33143:SF4	VQ MOTIF-CONTAINING PROTEIN 20	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G017520.1	CsGy2G017520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding