CsGy2G016530 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G016530
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 20856259 .. 20857009 (+)
RNA-Seq ExpressionCsGy2G016530
SyntenyCsGy2G016530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGTACTCGTCTGTCGGATAACTATTATCACTGGGATAAGAATATCAAGAATCTTATGTACGATTTGTTGAAATATGATGAAGGCATGCCCCCTACTGCATCTTTTGCAAGTACATTTATGTGTGACAGTTGTATCTCCTCTGAAGAAAGTTTAAATCTGTGTAATGCAGAGTCTGTTGCTACAGAATTATCTTATACCCAGTGCCTTGTTTCTTCTTTCAAATATGGTGATAAATTTGATAAGAGTTTATGTTGAAGCATCATTGGAAGTCTTCTGTTTCTGACTACAAGTTGTCATGATAGTGCTTTTGCTGTTTGTGCTTGTGTGTGCTATCAAGTTGATCCTCAAGCATTTGATTAACACTGTACTAAACGTATTTTGAATTGTGTCAGATCACCGTCACACTGGTGGTTCTTCCATGATTGCTGCCTTAGTTAGTAAGGCTCATTCCTGTTCACTCTTGCATTCTGTCCGAACTATTGCTACTGGAGAAACTATTAATCATGACTTAGAATCCTCTAATGATGATGGTAATGTGATCATATTTGTTGCAGTGCATCGAAAGGTTGTTGGTGCATCTTTTTCTATGCCTAAGAAAAGTAGGTCTAAGCCTTCTAAGAAGCCTAAAACAAAGAAGACTTTTGTTGTTGATAATTTATATAATAAGCGCTTTGGTGGTGTCCATTCTAAACACTATGATGATGAAATCTCTCAGAATACTACCCAAAACATACTCGTTTTTTAG

mRNA sequence

ATGACAGGTACTCGTCTGTCGGATAACTATTATCACTGGGATAAGAATATCAAGAATCTTATGTACGATTTGTTGAAATATGATGAAGGCATGCCCCCTACTGCATCTTTTGCAAATCACCGTCACACTGGTGGTTCTTCCATGATTGCTGCCTTAGTTAGTAAGGCTCATTCCTGTTCACTCTTGCATTCTGTCCGAACTATTGCTACTGGAGAAACTATTAATCATGACTTAGAATCCTCTAATGATGATGGTAATGTGATCATATTTGTTGCAGTGCATCGAAAGGTTGTTGGTGCATCTTTTTCTATGCCTAAGAAAAGTAGGTCTAAGCCTTCTAAGAAGCCTAAAACAAAGAAGACTTTTGTTGTTGATAATTTATATAATAAGCGCTTTGGTGGTGTCCATTCTAAACACTATGATGATGAAATCTCTCAGAATACTACCCAAAACATACTCGTTTTTTAG

Coding sequence (CDS)

ATGACAGGTACTCGTCTGTCGGATAACTATTATCACTGGGATAAGAATATCAAGAATCTTATGTACGATTTGTTGAAATATGATGAAGGCATGCCCCCTACTGCATCTTTTGCAAATCACCGTCACACTGGTGGTTCTTCCATGATTGCTGCCTTAGTTAGTAAGGCTCATTCCTGTTCACTCTTGCATTCTGTCCGAACTATTGCTACTGGAGAAACTATTAATCATGACTTAGAATCCTCTAATGATGATGGTAATGTGATCATATTTGTTGCAGTGCATCGAAAGGTTGTTGGTGCATCTTTTTCTATGCCTAAGAAAAGTAGGTCTAAGCCTTCTAAGAAGCCTAAAACAAAGAAGACTTTTGTTGTTGATAATTTATATAATAAGCGCTTTGGTGGTGTCCATTCTAAACACTATGATGATGAAATCTCTCAGAATACTACCCAAAACATACTCGTTTTTTAG

Protein sequence

MTGTRLSDNYYHWDKNIKNLMYDLLKYDEGMPPTASFANHRHTGGSSMIAALVSKAHSCSLLHSVRTIATGETINHDLESSNDDGNVIIFVAVHRKVVGASFSMPKKSRSKPSKKPKTKKTFVVDNLYNKRFGGVHSKHYDDEISQNTTQNILVF*
Homology
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BLAST of CsGy2G016530 vs. NCBI nr
Match: KAE8652935.1 (hypothetical protein Csa_017759 [Cucumis sativus])

HSP 1 Score: 314 bits (805), Expect = 4.46e-108
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MTGTRLSDNYYHWDKNIKNLMYDLLKYDEGMPPTASFANHRHTGGSSMIAALVSKAHSCS 60
           MTGTRLSDNYYHWDKNIKNLMYDLLKYDEGMPPTASFANHRHTGGSSMIAALVSKAHSCS
Sbjct: 1   MTGTRLSDNYYHWDKNIKNLMYDLLKYDEGMPPTASFANHRHTGGSSMIAALVSKAHSCS 60

Query: 61  LLHSVRTIATGETINHDLESSNDDGNVIIFVAVHRKVVGASFSMPKKSRSKPSKKPKTKK 120
           LLHSVRTIATGETINHDLESSNDDGNVIIFVAVHRKVVGASFSMPKKSRSKPSKKPKTKK
Sbjct: 61  LLHSVRTIATGETINHDLESSNDDGNVIIFVAVHRKVVGASFSMPKKSRSKPSKKPKTKK 120

Query: 121 TFVVDNLYNKRFGGVHSKHYDDEISQNTTQNILVF 155
           TFVVDNLYNKRFGGVHSKHYDDEISQNTTQNILVF
Sbjct: 121 TFVVDNLYNKRFGGVHSKHYDDEISQNTTQNILVF 155

The following BLAST results are available for this feature:
BLAST of CsGy2G016530 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G016530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652935.14.46e-108100.00hypothetical protein Csa_017759 [Cucumis sativus][more]
BLAST of CsGy2G016530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy2G016530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G016530.2CsGy2G016530.2mRNA