CsGy2G016000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G016000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	acyl-coenzyme A thioesterase 13
Location	Gy14Chr2: 15941823 .. 15944721 (-)
RNA-Seq Expression	CsGy2G016000
Synteny	CsGy2G016000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGACATTTGCACTCCAAAATGAAGTCTTCATTTACTTTGTGTCTAAACATCTTTTCTTAATGATGATTATGATGATTATGTCTAAACATCTTTCCTTAATTTAGTAGACGTTTCAAAATTTGTAAAGTTATAAGACAAAATTGATATATACAGAAACTTATCATCTATAATTATATATATGGATTTGACATTGTTATTTCTTCTTGGACTCAATCTGCAATTATATTTTTTGAGAAATAACGAAAACAAGCAATTTATGAGCATAGGAAAGCAGATTGAGAAAGAGCAAGAAGCAAGAGAAGAGGGTCAAAGTAATATAACATTTTAACATGGCGCCATCATAAGTAAAAGACTAATTTTGATGAAACGAGCAGTTCAAAAAATCCCAAAATTGCTAGGATTTGAAATGTGTGACAGAGAGCAATAATATATCTTCAAAAGTCCCAAAACAGATATATACTTACTTTGATTTGAGAAATAAGACCCAATCATTGAGATATGGGAAACACAAAGGGACTCGTACATAATGATCCCAAGCTTGGTTCCGCCATGGATGACCTTCCTTTCAGATTTTTCCAGTTCTTTGTTATGTCAACTCTTCGCATTGATCTCCTCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGATTGTATGCTTTTTCTCCCTTCTTCTACTTGTTTTTTTTTCCACCTTCCATCCACTTCCTCATGCCATTTCTACTCCCCCTTTTCTATCTTTTGACTTCTTCTGTTTTCTGCTTGATTAAGAACGATAATAATTCCCTGCGCCACGGAGCCTCCGTGTTCCTTGTCGATACTTTGGGTCATGCAGCGGTGAAGACTCTGGGCCCTCCCTCCACCGGAGTATCCCTCGAAGTCAACGTCTCCTTCTTCGATGCTGCTTATCTCGACGTCAGTTCCACTTTCCCCCTTTTCTGTTTCTTTGATCTTCATCACTTTACCGACTCTCCAACTAATTTTGTCCTCTCTTTTTTAATCTACTAACTGACATGGAAGCTCAAATTACTGCTCCATCGATTGTCAATCTAAATCCTTACTTCTAATTACGAACGCTGTCTATTGATCTAACCAACAACACTTTTTTCTTCCTTCAGTAATGTTAATAATGTAAAGTTCCCCTCTCTCCTTACTCGATGGAAAGAAAAGGTACAAAATTAAAGTGGATTTTCATGATATGTTATCTCGCAGTAAGTAATTCTTGGGGCTAATAATTGAAGAATTTTGAATTATTTGGGTTTGAAGATTGGATTACACTGTCCGGGGAACTTACACGAAGCTCAAGGGTATGTGTTGATTCAGTTTACGTAAGTCTTAACTTTACGGTTAAATATTAGTTTGATTCCCATTTCATAGACACTAATCGCAAATGAATACTGACATTATTATTGGGTTAAGAAGTTCCAGCTCTTAGACATGATTGGGTTTAATCATTCAACTGATTCTCAAGAGTGATCGTAAAGATAAATAATTCTTTCAAGTGAAAGAGATCGTGAGCACACTCACGCTCTATTGCTATTAGCAGAGTTGTCTGCAGTTCCTAGGTCTAGGAATAATTATATTATGACAATTGACAGGTAAAGAATTCCCTTGATTTTTGAAGAATCATTTTCTTGGATTTCTAATCAGCTAATTTGTGATAGACTGACGATTCTCTGGAAGTTGTAAAGGAAAATAGATGATCATTGTAGGAATTTGACCTGCAGGTTCAAGTGAACTTAGACGAGAATTGCTAACCACAAGTATTGCTTAATTTGTCAAGGCATCATTCCTCGATCAAACGGACATTGTATTGACTGCTACTTCTTTTTTTCTTTCTGTTTTCCTTGTGTTGATAGGTCATGTATTTTTGTCTGACTTGGTCTTGATACTTTCATTTGTTTTAATAAAAGGTGGCTTTTTTATGTGCAAAAAAGAATTTACTGATTTAGTTCGCACGTCAACCATTGGTGGTAAAGTGTGTTATGTTTTCTTTGGTTGCCTTTAGATGGATCCAGTCATTTCCTTGTATCCCTCCTGTTGAACCCGTTCTCAAGTGTTTGATACTACTTTCTGACTGGTGTTTTAGGAGGAGATTGAGATTGACAGCAACGTTTTGCGTCTGGGAAAGACCATTGCAGTAGTTAATGTTGAAATTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCAACTACACCCCCGTCTCAAGCAAATTGTAGTCATGAACTTTCACTTGGACGTCGTGTTGCCAACCATTTTCCTCTGCCTCACGTACTGATGTGCCAGATTTCATTTTCAGGCTTCAACCGAAAGAAATGTACTAATAATGATAACATGTTGCAGAAATATAATGGTGAAGATATCACATTGTCTTAAGAAATGTAATGGGATATTACATTTTGTGCATTTTCGATTTTCCAAATGGTAGTGTAGCTAAGTATAGGGCTGGCTTGGTAGCAAAAGGATATCCTCGAGAGGAAATTGATTAGGGGAAAGCCTTCAGTGAAGAGGTTGTGAAGATATATATAATACTTATCATTCTATCTCTTGATACTCAATTTGGGAGGAATTTGCAACATGACACTACGGATGCATTTCTTCCAGGGGATGTTCATGAAGGGGTTTATATGTGAAAACTTAAAAAATTTGTTCAACAATTCTCGCCCAATCTAGTTCGTAAACTTCTTAAATTTCTCTATGGATTGAAGCAAGTGCCGTGTTAGTTTGTAAACTTCTTATGGCTTGAAGTAAGCATTTTGTGCTTGGCTTGAATGTTTTACGTCCCATCTTTTAACTTTGGAATTCATTCCCTCCAATGTCGATTCTTTCTTGTGTTCATTTTCAACTACTATTATATGTTAGTATACTATTG

mRNA sequence

TTTTGACATTTGCACTCCAAAATGAAGTCTTCATTTACTTTGTGTCTAAACATCTTTTCTTAATGATGATTATGATGATTATGTCTAAACATCTTTCCTTAATTTAGTAGACGTTTCAAAATTTGTAAAGTTATAAGACAAAATTGATATATACAGAAACTTATCATCTATAATTATATATATGGATTTGACATTGTTATTTCTTCTTGGACTCAATCTGCAATTATATTTTTTGAGAAATAACGAAAACAAGCAATTTATGAGCATAGGAAAGCAGATTGAGAAAGAGCAAGAAGCAAGAGAAGAGGGTCAAAGTAATATAACATTTTAACATGGCGCCATCATAAGTAAAAGACTAATTTTGATGAAACGAGCAGTTCAAAAAATCCCAAAATTGCTAGGATTTGAAATGTGTGACAGAGAGCAATAATATATCTTCAAAAGTCCCAAAACAGATATATACTTACTTTGATTTGAGAAATAAGACCCAATCATTGAGATATGGGAAACACAAAGGGACTCGTACATAATGATCCCAAGCTTGGTTCCGCCATGGATGACCTTCCTTTCAGATTTTTCCAGTTCTTTGTTATGTCAACTCTTCGCATTGATCTCCTCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGATTAACGATAATAATTCCCTGCGCCACGGAGCCTCCGTGTTCCTTGTCGATACTTTGGGTCATGCAGCGGTGAAGACTCTGGGCCCTCCCTCCACCGGAGTATCCCTCGAAGTCAACGTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGAGATTGAGATTGACAGCAACGTTTTGCGTCTGGGAAAGACCATTGCAGTAGTTAATGTTGAAATTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCAACTACACCCCCGTCTCAAGCAAATTGTAGTCATGAACTTTCACTTGGACGTCGTGTTGCCAACCATTTTCCTCTGCCTCACGTACTGATGTGCCAGATTTCATTTTCAGGCTTCAACCGAAAGAAATGTACTAATAATGATAACATGTTGCAGAAATATAATGGTGAAGATATCACATTGTCTTAAGAAATGTAATGGGATATTACATTTTGTGCATTTTCGATTTTCCAAATGGTAGTGTAGCTAAGTATAGGGCTGGCTTGGTAGCAAAAGGATATCCTCGAGAGGAAATTGATTAGGGGAAAGCCTTCAGTGAAGAGGTTGTGAAGATATATATAATACTTATCATTCTATCTCTTGATACTCAATTTGGGAGGAATTTGCAACATGACACTACGGATGCATTTCTTCCAGGGGATGTTCATGAAGGGGTTTATATGTGAAAACTTAAAAAATTTGTTCAACAATTCTCGCCCAATCTAGTTCGTAAACTTCTTAAATTTCTCTATGGATTGAAGCAAGTGCCGTGTTAGTTTGTAAACTTCTTATGGCTTGAAGTAAGCATTTTGTGCTTGGCTTGAATGTTTTACGTCCCATCTTTTAACTTTGGAATTCATTCCCTCCAATGTCGATTCTTTCTTGTGTTCATTTTCAACTACTATTATATGTTAGTATACTATTG

Coding sequence (CDS)

ATGGGAAACACAAAGGGACTCGTACATAATGATCCCAAGCTTGGTTCCGCCATGGATGACCTTCCTTTCAGATTTTTCCAGTTCTTTGTTATGTCAACTCTTCGCATTGATCTCCTCCAACCTGGTCGCATCCTTTGCTCTCTCAAAGTCCCTGCTCGTTTGATTAACGATAATAATTCCCTGCGCCACGGAGCCTCCGTGTTCCTTGTCGATACTTTGGGTCATGCAGCGGTGAAGACTCTGGGCCCTCCCTCCACCGGAGTATCCCTCGAAGTCAACGTCTCCTTCTTCGATGCTGCTTATCTCGACGAGGAGATTGAGATTGACAGCAACGTTTTGCGTCTGGGAAAGACCATTGCAGTAGTTAATGTTGAAATTAGGAAGAAAAGCAATGGTAAAATTATTGCTCAGGGTCGCCTCACCAACTACACCCCCGTCTCAAGCAAATTGTAG

Protein sequence

MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNYTPVSSKL*

Homology

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BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot
Match: Q9NPJ3 (Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 30  VMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVS 89
           V+  + +    PG+++C +KV     N   +L  G +  LVD +   A+      + GVS
Sbjct: 24  VLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVS 83

Query: 90  LEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNY 144
           +++N+++   A L E+I I ++VL+ GKT+A  +V++  K+ GK+IAQGR T +
Sbjct: 84  VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKH 137

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BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot
Match: Q5R833 (Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 30  VMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVS 89
           V+  + +    PG+++C +KV     N   +L  G +  LVD +   A+      + GVS
Sbjct: 24  VLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVS 83

Query: 90  LEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNY 144
           +++N+++   A L E+I I ++VL+ GKT+A  +V++  K+ GK+IAQGR T +
Sbjct: 84  VDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKH 137

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BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot
Match: Q9CQR4 (Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 41  PGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAA 100
           P +++C +KV  +  N   +L  G +  LVD++   A+      + GVS+++N+++   A
Sbjct: 35  PEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGAPGVSVDMNITYMSPA 94

Query: 101 YLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNY 144
            + EEI I +++L+ GKT+A  +V++  K+ GK+IAQGR T +
Sbjct: 95  KIGEEIVITAHILKQGKTLAFASVDLTNKTTGKLIAQGRHTKH 137

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BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot
Match: P34419 (Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 29/99 (29.29%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 43  RILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYL 102
           +++C + V  + +N   +L  G +  L D +   AV          S+E+ VS+     +
Sbjct: 53  KLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYLLPVKV 112

Query: 103 DEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLT 142
            + +EI ++VL++G+T+A  + E R+KS+GK+ A+G+ T
Sbjct: 113 GDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151

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BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot
Match: P87304 (Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC31F10.02 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 26  FQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPS 85
           F   V+S ++I    PG + CSLK+    +N   +L  G    L D  G  A+ + G   
Sbjct: 27  FDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRGLFI 86

Query: 86  TGVSLEVNVSFFDA-AYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNY 144
           +GVS+++N +F  +   L   I + +   RLG  IA  +V+    SN ++ A+GR T +
Sbjct: 87  SGVSIDMNQTFLQSGGTLGSSILLHAKCDRLGSNIAFTSVDFLTSSN-EVFAKGRHTKF 144

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BLAST of CsGy2G016000 vs. NCBI nr
Match: XP_004147338.1 (putative esterase F42H10.6 [Cucumis sativus] >KGN62226.1 hypothetical protein Csa_016918 [Cucumis sativus])

HSP 1 Score: 295 bits (755), Expect = 1.29e-100
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS
Sbjct: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA
Sbjct: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL
Sbjct: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150

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BLAST of CsGy2G016000 vs. NCBI nr
Match: XP_008460848.1 (PREDICTED: putative esterase F42H10.6 [Cucumis melo])

HSP 1 Score: 257 bits (657), Expect = 1.13e-85
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MG TKG+V NDPK+GS MDDLPF+FFQFFVM+ LRIDLLQPGR+LCSLKVPARL+NDNNS
Sbjct: 1   MGKTKGIVDNDPKVGSPMDDLPFKFFQFFVMTALRIDLLQPGRVLCSLKVPARLLNDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           +R GAS  LVD LGHAAVKTL P STGVSLEVNVSFFDAAYLDEEIEIDSNVLR+GKTIA
Sbjct: 61  MRQGASALLVDCLGHAAVKTLTPSSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRMGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVE RKKSNGKIIAQGRLT Y PVSSKL
Sbjct: 121 VVNVEFRKKSNGKIIAQGRLTTYVPVSSKL 150

[Close]

BLAST of CsGy2G016000 vs. NCBI nr
Match: KAA0063086.1 (putative esterase F42H10.6 [Cucumis melo var. makuwa] >TYK02046.1 putative esterase F42H10.6 [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (615), Expect = 2.34e-79
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MG TKG+V NDPK+GS MDDLPF+FFQFFVM+ LRIDLLQPGR+LCSLK      NDNNS
Sbjct: 1   MGKTKGIVDNDPKVGSPMDDLPFKFFQFFVMTALRIDLLQPGRVLCSLK------NDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           +R GAS  LVD LGHAAVKTL P STGVSLEVNVSFFDAAYLDEEIEIDSNVLR+GKTIA
Sbjct: 61  MRQGASALLVDCLGHAAVKTLTPSSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRMGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVE RKKSNGKIIAQGRLT Y PVSSKL
Sbjct: 121 VVNVEFRKKSNGKIIAQGRLTTYVPVSSKL 144

[Close]

BLAST of CsGy2G016000 vs. NCBI nr
Match: XP_038901328.1 (putative esterase F42H10.6 [Benincasa hispida])

HSP 1 Score: 227 bits (579), Expect = 1.07e-73
Identity = 120/156 (76.92%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 1   MGNTKGLVH------NDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARL 60
           M  TKG V       +D K+  AMDDLPFRFFQFFV++ LRIDL+QPGRILCSLKVP RL
Sbjct: 1   MEKTKGGVEKHTDSDDDRKVAFAMDDLPFRFFQFFVLAALRIDLIQPGRILCSLKVPDRL 60

Query: 61  INDNNSLRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLR 120
           +N+NNSLR GAS  LVD LGHAAVKTLGP STGVSLEVN+SF DAAY DEEIEIDS VLR
Sbjct: 61  LNENNSLREGASALLVDCLGHAAVKTLGPSSTGVSLEVNLSFLDAAYADEEIEIDSKVLR 120

Query: 121 LGKTIAVVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           +GKTIAVVNVE RKK NGKIIAQGRLT Y PVSSKL
Sbjct: 121 MGKTIAVVNVEFRKKINGKIIAQGRLTTYVPVSSKL 156

[Close]

BLAST of CsGy2G016000 vs. NCBI nr
Match: XP_023512633.1 (acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196 bits (499), Expect = 1.47e-61
Identity = 97/141 (68.79%), Postives = 119/141 (84.40%), Query Frame = 0


Query: 10  NDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFL 69
           +D KL S +D LPFRF++ FVM+ LR+DL++PGRI+CSLKVPARL+N+NNSL  GAS  L
Sbjct: 13  DDRKLASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASL 72

Query: 70  VDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKK 129
           VD +G  A+KTLG  +TGVSLE+N+S+ DAAYLDEEIEID+ VLRLGKTIAV+NVE+R+K
Sbjct: 73  VDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRK 132

Query: 130 SNGKIIAQGRLTNYTPVSSKL 150
            NGKIIAQGR T Y  +SSKL
Sbjct: 133 GNGKIIAQGRHTKYLAISSKL 153

[Close]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL
Match: A0A0A0LQE5 (4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336730 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 6.26e-101
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS
Sbjct: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA
Sbjct: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL
Sbjct: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150

[Close]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL
Match: A0A1S3CEJ6 (putative esterase F42H10.6 OS=Cucumis melo OX=3656 GN=LOC103499600 PE=3 SV=1)

HSP 1 Score: 257 bits (657), Expect = 5.49e-86
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MG TKG+V NDPK+GS MDDLPF+FFQFFVM+ LRIDLLQPGR+LCSLKVPARL+NDNNS
Sbjct: 1   MGKTKGIVDNDPKVGSPMDDLPFKFFQFFVMTALRIDLLQPGRVLCSLKVPARLLNDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           +R GAS  LVD LGHAAVKTL P STGVSLEVNVSFFDAAYLDEEIEIDSNVLR+GKTIA
Sbjct: 61  MRQGASALLVDCLGHAAVKTLTPSSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRMGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVE RKKSNGKIIAQGRLT Y PVSSKL
Sbjct: 121 VVNVEFRKKSNGKIIAQGRLTTYVPVSSKL 150

[Close]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL
Match: A0A5D3BUX4 (Putative esterase F42H10.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00290 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 1.13e-79
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 1   MGNTKGLVHNDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNS 60
           MG TKG+V NDPK+GS MDDLPF+FFQFFVM+ LRIDLLQPGR+LCSLK      NDNNS
Sbjct: 1   MGKTKGIVDNDPKVGSPMDDLPFKFFQFFVMTALRIDLLQPGRVLCSLK------NDNNS 60

Query: 61  LRHGASVFLVDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIA 120
           +R GAS  LVD LGHAAVKTL P STGVSLEVNVSFFDAAYLDEEIEIDSNVLR+GKTIA
Sbjct: 61  MRQGASALLVDCLGHAAVKTLTPSSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRMGKTIA 120

Query: 121 VVNVEIRKKSNGKIIAQGRLTNYTPVSSKL 150
           VVNVE RKKSNGKIIAQGRLT Y PVSSKL
Sbjct: 121 VVNVEFRKKSNGKIIAQGRLTTYVPVSSKL 144

[Close]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL
Match: A0A6J1E0I3 (acyl-coenzyme A thioesterase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025285 PE=3 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.08e-61
Identity = 95/141 (67.38%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 10  NDPKLGSAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFL 69
           +D  L SA+DDLP RF++ FVM+ LR+DL++PGR++CSLKVPARL+N+NNSL  GA+  L
Sbjct: 15  DDRNLASAIDDLPLRFYEQFVMTGLRVDLIEPGRVVCSLKVPARLLNENNSLHGGATAAL 74

Query: 70  VDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKK 129
           VD +G AA+KT G  +TGVS+E+NVS+ DAAYLDE+IEI+S VLR+GKTIAVVNVE+RKK
Sbjct: 75  VDCIGSAAIKTFGVSTTGVSVEINVSYMDAAYLDEQIEIESKVLRMGKTIAVVNVELRKK 134

Query: 130 SNGKIIAQGRLTNYTPVSSKL 150
           SNGKI+AQGR T Y  +SSKL
Sbjct: 135 SNGKIVAQGRHTKYLAISSKL 155

[Close]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL
Match: A0A1S3CCW9 (acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103499601 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.30e-61
Identity = 100/141 (70.92%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 13  KLG---SAMDDLPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFL 72
           KLG   SA+D LPFRF++ F+M+ +R+DL+QPGRILCSLKVPARL+N+NNSL  GAS  L
Sbjct: 10  KLGDDASAIDVLPFRFYENFIMTGIRVDLIQPGRILCSLKVPARLLNENNSLHGGASASL 69

Query: 73  VDTLGHAAVKTLGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKK 132
           VD +G AA+KTLG  +TGVSLE+N+S+ DAAYLDEEIEIDS VLR+GKTIAV+NVE+R+K
Sbjct: 70  VDCIGSAALKTLGATTTGVSLEINLSYLDAAYLDEEIEIDSKVLRMGKTIAVINVELRRK 129

Query: 133 SNGKIIAQGRLTNYTPVSSKL 150
           SNGKIIAQGR T Y   SSKL
Sbjct: 130 SNGKIIAQGRHTKYLAFSSKL 150

[Close]

BLAST of CsGy2G016000 vs. TAIR 10
Match: AT1G04290.1 (Thioesterase superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 71/130 (54.62%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 21  LPFRFFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKT 80
           LP RF + FV + L++DL++PGRI+CS+K+P  L+N    L  GA+  LVD +G A + T
Sbjct: 26  LPHRFLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVDLIGSAVIYT 85

Query: 81  LGPPSTGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRL 140
            G   +GVS+E+NVS+ DAA+LDEEIEI+S  LR+GK +AVV+VE+RKK+ GKIIAQGR 
Sbjct: 86  AGASHSGVSVEINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKTTGKIIAQGRH 145

Query: 141 TNYTPVSSKL 151
           T Y    S L
Sbjct: 146 TKYFAPRSNL 155

[Close]

BLAST of CsGy2G016000 vs. TAIR 10
Match: AT2G29590.1 (Thioesterase superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 25  FFQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPP 84
           F++ F +  +R++ ++PG I CS KVP RL + + +L +GA   LVD +G A V   G P
Sbjct: 34  FYENFSLRGIRVNRVEPGFISCSFKVPLRLTDRDKNLANGAIANLVDEVGGALVHGEGLP 93

Query: 85  STGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRLTNYT 144
            + VS++++++F   A L EE+EI S +L          V +R K  G+IIA+GR + + 
Sbjct: 94  MS-VSVDMSIAFLSKAKLGEELEITSRLLGERGGYKGTIVVVRNKMTGEIIAEGRHSMFG 153

Query: 145 PVSSKL 151
             +SKL
Sbjct: 154 RQASKL 158

[Close]

BLAST of CsGy2G016000 vs. TAIR 10
Match: AT3G16175.1 (Thioesterase superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08
Identity = 32/115 (27.83%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 26  FQFFVMSTLRIDLLQPGRILCSLKVPARLINDNNSLRHGASVFLVDTLGHAAVKTLGPPS 85
           F+  ++  L +  +  G + C L V   ++ ++ S   G    ++D++G +AV + G   
Sbjct: 25  FEILILKGLELIHVGKGILRCKLLVTDHVVGEDGSWNAGVITAVMDSIGASAVYSSG-GG 84

Query: 86  TGVSLEVNVSFFDAAYLDEEIEIDSNVLRLGKTIAVVNVEIRKKSNGKIIAQGRL 141
             +S+++N SF+  A + E +EI++ V      +    +EIR++++G+IIA GRL
Sbjct: 85  LHISVDLNSSFYSTAKIHETVEIEARVNGSNGGLKSAVIEIRRETSGEIIATGRL 138

The following BLAST results are available for this feature:

BLAST of CsGy2G016000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NPJ3	4.5e-13	33.33	Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1	[more]
Q5R833	4.5e-13	33.33	Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1	[more]
Q9CQR4	1.7e-12	33.98	Acyl-coenzyme A thioesterase 13 OS=Mus musculus OX=10090 GN=Acot13 PE=1 SV=1	[more]
P34419	1.1e-06	29.29	Putative esterase F42H10.6 OS=Caenorhabditis elegans OX=6239 GN=F42H10.6 PE=1 SV...	[more]
P87304	5.3e-06	31.09	Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

BLAST of CsGy2G016000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147338.1	1.29e-100	100.00	putative esterase F42H10.6 [Cucumis sativus] >KGN62226.1 hypothetical protein Cs...	[more]
XP_008460848.1	1.13e-85	86.00	PREDICTED: putative esterase F42H10.6 [Cucumis melo]	[more]
KAA0063086.1	2.34e-79	82.67	putative esterase F42H10.6 [Cucumis melo var. makuwa] >TYK02046.1 putative ester...	[more]
XP_038901328.1	1.07e-73	76.92	putative esterase F42H10.6 [Benincasa hispida]	[more]
XP_023512633.1	1.47e-61	68.79	acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G016000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQE5	6.26e-101	100.00	4HBT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336730 PE=3 S...	[more]
A0A1S3CEJ6	5.49e-86	86.00	putative esterase F42H10.6 OS=Cucumis melo OX=3656 GN=LOC103499600 PE=3 SV=1	[more]
A0A5D3BUX4	1.13e-79	82.67	Putative esterase F42H10.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1E0I3	1.08e-61	67.38	acyl-coenzyme A thioesterase 13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CCW9	1.30e-61	70.92	acyl-coenzyme A thioesterase 13 OS=Cucumis melo OX=3656 GN=LOC103499601 PE=3 SV=...	[more]

BLAST of CsGy2G016000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04290.1	3.3e-35	54.62	Thioesterase superfamily protein	[more]
AT2G29590.1	1.1e-14	37.30	Thioesterase superfamily protein	[more]
AT3G16175.1	1.2e-08	27.83	Thioesterase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.129.10	Hotdog Thioesterase	coord: 18..145 e-value: 4.4E-30 score: 106.5
None	No IPR available	PANTHER	PTHR21660:SF47	F19P19.27 PROTEIN	coord: 16..150
None	No IPR available	CDD	cd03443	PaaI_thioesterase	coord: 34..143 e-value: 2.42942E-17 score: 70.6646
IPR003736	Phenylacetic acid degradation-related domain	TIGRFAM	TIGR00369	TIGR00369	coord: 39..142 e-value: 4.4E-11 score: 40.9
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 63..133 e-value: 1.1E-11 score: 44.9
IPR039298	Acyl-coenzyme A thioesterase 13	PANTHER	PTHR21660	THIOESTERASE SUPERFAMILY MEMBER-RELATED	coord: 16..150
IPR029069	HotDog domain superfamily	SUPERFAMILY	54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 21..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G016000.2	CsGy2G016000.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0047617	acyl-CoA hydrolase activity