CsGy2G015800 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G015800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ras-related protein Rab-18
Location	Gy14Chr2: 15764972 .. 15770104 (+)
RNA-Seq Expression	CsGy2G015800
Synteny	CsGy2G015800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGATTATATATTTTCTAATAGAATTAGATGAATTAGAGAGAAAAATGAAAAACAAAAAACCACAGCCAATGTTTTATTAGTTATGTTTTGCAATATTCATCATGAACTTATATAACCTTGCAATTTAGTACAATTTAATTGAAGCTTTTCTGTGGTTGTCTTACCAATCAATCCATTGGCTGAGTTGACACCCGAGTTAAGGGCGACATCGGTAGATGACTCGGAATTTTCATTCCCAATTCCCTTTTCAAATTCTATAACCTTCGTCACCACGAACAATTTGCAATAGATACGAAACCAAGATCAGGGTCTTCTTAATTTTCCTTCTATCTTTCTTTTTCCCCTTCATTGGACGCGCCATCAATTCTACATTGGATTGCAGCATTTGGGTATTAAATTTTGATCTGTTTTTACGGGATGTCATGTTCGATTTCATTGTGATTCATTCAATTCCATTTCTGTCGCATGTTTTCGTATCTCTTTGGTAATGGTGCATGCTGTTTTGCATTTGTTGAATCAGCTGACATTTGGGTTTTCTTTTTCTTTGATTAGGTACGTGAATCGGGTAGCGATCTTGTTTTTAAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACGATCGGTTAGTTTTGCTATACGGATCAGATTTGAAGTATTAGTTTGGAATTTCCTTTTTTGCTTTTGTGGGATCTTGCGCATTCTTTTTGAAAATGAGCTTAGACAAATCGGTTTTGTTGTTTGCTGCGGAATATTGGTTCATCATTTTAAAGAAACATGTGGAAAGACAATGATATACTTTTGCTGAATATTGGTTCATCATTTTCACTTTCACCTTCACCTTCTGCATGGGATTGAGATGAGATTGAGGGCAAAAAATTAAATGAAAGGGAAAGTTGAGAGGACCAAGATTGAGAGAGGCAATTAATCTTAACCGTATTTCATCAAGAGAAGAATGAAGCTCTTAGATAATCAGGTCAGGTGTCATTTTTTTAGGACAGTGTAAGGAACTTAGCTATAATCGTATCTGAGAAACTAAAATGAGAAGTCATGAAAGAGGTAATTTGTGCATTAATTTCTAATGGAAAATACTATATTTCAATGTAAATATGTATTGTATACTTTCAGGTATACAATGAAAAGTTCATTTTCTTTGTAATATTATATATATATACACACACTGTATACTTTCTACCCGCTCTATTATCACTGGTCATCTATACTTTTGCATTCTGTTCAGTACTTACTGACCCTGTGTAAATCTAGGCATATGCTCATCGTCCTACTGTGGGGCTATTAGTAGAATAGATTTCCTTTTACCTGTGTAAGTTTGGTTGAATTTCAAACCGCATAGCTGAAATTTTGGATGTTCTCTTTCTTATTAAAACATTATTAACAAAATTGAGAATTTAAAATGATTTTGATTATAAATCCTACGTCTGCATGTTTAATTGTGCTGGTTTGCTTGTTTAAAATGGAAAACGGCACAAGCCTTGCTAACTTCTTAATTTGCCTTGCAATGGCATGTAACCATCAATAGACTAGAAATGACTTTTAATTAATTGGTTGTTTTTGTGCGCAGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGTGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGGTAATTAAGCTTCTCCACACACATAAATAGGCTTCTTCTTCCTCCATTTTTATTTTTGAGAGGGCGTCTATTCTATTTTCCACACATGCAAGATGTATGCTTTGGCAGAGAAGCACCAAACGGCTAAGTTAGATAATTAATTTACAAAAAGATATTGCTTAGCTAATTATATAAGCAGCTGGACGGTATACTAAATTATAAATACATTGAGGCTTGGCCATTTGCGTAGCTTGTCCTTTGTTCACCAGCTCAAAGTTGACTTTTCCTTCATGGTCCGGCAATCTATGCAGTAATCCTCGATTCGGCACAGTTTTCTCCTGTTTTGAATGTAGAAGCTAGAAAATTTTGTTACCAAATCTTTGAGGCATTAAATAAATGGATGAGAAGACAATAAATTTAACCAATTGACAAATAGATCTGGAAGGTGAAAACGGATGCTAACTGTTGACCATAAGTGTGCCTGGATGATGGTTCTGCTGTGCAGAAAAATGCAACATGAATGAACTTTTCACGTTCATGTATAGAACTTTGTTGAACCTGCAGCCGGCTAGAGCTTTTTCATCAAGATTAGAAACTTGTTCATATTTGTGTTTGAATTAAATTTGGATCTTGACCTAACAGACTAAGAAATTGCTCAAAGGATTGTACATGCTTATTCTAATTCTTAACTGTTATCCAGTGGTCCTAGTGCTGTGAATTATAAAGATAATATAGTTGTTCTTGTTGATTAGCCATGATGTATTTGATGGTACTAGGGTATTACTTCCTATATTTTCTTGTAATGAATCTGTATGAAAGAAATCTGGTTTACCACATCTCCAAACTATGCATCTTGTAGAATCTAACTCAATGTTCAATCGTACAGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGGTGCGTTCTACTCCCTTCTTTATTTGATTGTTTTAAAGAGAAGAAATTCTTTGCTTGGCATAAATGTTAAATTTCTCAGCTGTGTTTAGTTTAAACGCATTCATGATTTTATCAAATGATAAGTTGTTCATTTGTTTGGCCGTCCAATATTATTCTATTGCCTTTTGTATTATGTTATCTTGATTATGACATCAAATATTAACTGTCAGTTTATGATGTAACGAGGAGAGACACGTTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACCAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGTAAGCGTCTTCAACTTCCATTTGAAATTTTCCATTCACCTGAATTTGGTTACTCTAACATTTGTATAGATGTCGATTAATTGTTCAAGTGTATGGTGAACTGAAATTCATATTCCAAAGAGTTTTCAGGTTAATTACCAATAACATATTGATAATTTAAGAACCGATTAAATGAGTTATGAATATCAAAGCTTTTTCCGTATGAGTTTGTTAGGTATTCAAGCTGTTATTTACTACTATTATTAGAAAGCTTAGAAGATGGCCTAATGGTAAAAACGGAGACATAGTCTGAATAACTAACTAAGAGGTCATGGGTTCAATACATGGTGGAATTAATTTCCTACATGTTATCTTGACACCCAGATGTTGTAGGGTCAGGCGGGTTGTTCCGTGAGAATAGTCGAGGTGCTCGTAAGCTTTCCCGGACACTCACGGTTATAAGAAAAAGAATTAGAAAGCTTAGAAGAGTGTTGAAACACTGTACAAATGAAATCTAACTTCTAGGTCTGGCTCATCTCCACGCACAAAGCCTATCCTAAATTATGACTCAAGAAACCAAACTTCCAATAGGAAGAACATAAAAACAAAAAGGCATGTGCGAAATACACTAAATGTGAAGTTCAGGTTTTTGAGATTCTTTTAAATTTCTTATGATAATGTTTTTCATTGTCTGCATCTAACTTACTTTTTATCTGGAATTTTATTCTTCAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTACAGAATGCAGTGCCAAAACTCGGGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGGTAGCAATTTCAGTTTAGTATTACTGTTGGTTCATTTATTGGTCAAGGGATTGATATTGATTGGTGAGTAGCAGGAACATGGTGTTTCCCTGTTGTAATTGTAACAGTCACATTTCTGATATTTTTTAAAAGATAAAAGCAATCACATTCCTGGTATATTCATAAATAGGTTAAGGCAGTGAAAAATTTTGAACCCTCTTGAATAGTCATATTTTAACGGCTAAAATTTTCCTCTTCCTTTTTCCCATTTTAAGATTTAGAAATATCCTGCAAACTCACTGAATGTTGCTTGGACGATTAAAACATGATGATAACGATTCTTATATACAGATTCTTGATACGCCCAGCCTTTTGTCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAACCTCCACAGTCTGATGCATCCACGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTGTTTCTACATTGTTGTAAAACTACAGTAGAGGAGCATGGTGTTATAGCTTTTATTTGTCTCACTCTCACAAATTACCTTACAAATTGAAAAGGGTGGTTTTGTCTTCTTGCTGGCTTTCTTGTACAGGGAAAAATTGAAATGGAAATATATGATACATGATTTCAGTCTTTCTTGCTTTAATTTAGTTGCTGTCCTCTGGACTTTTGTTTTGTTTCTATACACTGAGTCATAGATTCAGTACGATTAAAAGATGATTCTTGTTAATGTAAGAGCTGGGGGGAGGGGGGTTGGGAAGAAGTGTCCCACCTGCAAGTGTTTAATTGAAGGGCATATTTGGATGACTTTTAAGGGGTTATAAAAGGGTTCAAGGAAAATCCAAATAGGTCCTCATCCGACTCAAGTGGGGTTGATTTGAAGTCGAGTTGGGCTTTGTGACGGAAAGGAAGAACAACCCCGTTTGGTTGTATATGCATAAATTTAGCGATCTAATAAATAGGATCTTCTTTTACCGGTTACTCGTTTCTTTCACCGGTTCATGGAAGGTAACCGCTAGATTTGTTTTTTAGATGGAGAAATAAAAACCACTTGTTAGGGGCTTCTTTTTATTGAACTTATAAAGTTGGAGAATGGTGTGACTAAAGGTATCAGCTCGGTATGTGTTTGTTACAGTCGAGACGTTAATAAACTTAAATTCTTGAAACGTTGAAGAGGTTCTTTTGATTTCCTTTTATGGAAGGTATATCAAGAATGTAAATATTCTGATTGATT

mRNA sequence

CTTTGATTATATATTTTCTAATAGAATTAGATGAATTAGAGAGAAAAATGAAAAACAAAAAACCACAGCCAATGTTTTATTAGTTATGTTTTGCAATATTCATCATGAACTTATATAACCTTGCAATTTAGTACAATTTAATTGAAGCTTTTCTGTGGTTGTCTTACCAATCAATCCATTGGCTGAGTTGACACCCGAGTTAAGGGCGACATCGGTAGATGACTCGGAATTTTCATTCCCAATTCCCTTTTCAAATTCTATAACCTTCGTCACCACGAACAATTTGCAATAGATACGAAACCAAGATCAGGGTCTTCTTAATTTTCCTTCTATCTTTCTTTTTCCCCTTCATTGGACGCGCCATCAATTCTACATTGGATTGCAGCATTTGGGTACGTGAATCGGGTAGCGATCTTGTTTTTAAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACGATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGTGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTAACGAGGAGAGACACGTTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACCAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTACAGAATGCAGTGCCAAAACTCGGGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGATTCTTGATACGCCCAGCCTTTTGTCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAACCTCCACAGTCTGATGCATCCACGAGCAGTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTGTTTCTACATTGTTGTAAAACTACAGTAGAGGAGCATGGTGTTATAGCTTTTATTTGTCTCACTCTCACAAATTACCTTACAAATTGAAAAGGGTGGTTTTGTCTTCTTGCTGGCTTTCTTGTACAGGGAAAAATTGAAATGGAAATATATGATACATGATTTCAGTCTTTCTTGCTTTAATTTAGTTGCTGTCCTCTGGACTTTTGTTTTGTTTCTATACACTGAGTCATAGATTCAGTACGATTAAAAGATGATTCTTGTTAATGTAAGAGCTGGGGGGAGGGGGGTTGGGAAGAAGTGTCCCACCTGCAAGTGTTTAATTGAAGGGCATATTTGGATGACTTTTAAGGGGTTATAAAAGGGTTCAAGGAAAATCCAAATAGGTCCTCATCCGACTCAAGTGGGGTTGATTTGAAGTCGAGTTGGGCTTTGTGACGGAAAGGAAGAACAACCCCGTTTGGTTGTATATGCATAAATTTAGCGATCTAATAAATAGGATCTTCTTTTACCGGTTACTCGTTTCTTTCACCGGTTCATGGAAGGTAACCGCTAGATTTGTTTTTTAGATGGAGAAATAAAAACCACTTGTTAGGGGCTTCTTTTTATTGAACTTATAAAGTTGGAGAATGGTGTGACTAAAGGTATCAGCTCGGTATGTGTTTGTTACAGTCGAGACGTTAATAAACTTAAATTCTTGAAACGTTGAAGAGGTTCTTTTGATTTCCTTTTATGGAAGGTATATCAAGAATGTAAATATTCTGATTGATT

Coding sequence (CDS)

ATGGATTCGACGTCAAACCAAACCGAGTTTGATTACTTGTTCAAGTTGTTGATGATTGGGGACTCTGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACTTCCGATAACTTTGAAGATCTCTCACCGACGATCGGTGTGGATTTTAAGGTAAAGTATGTTACTGCTGGTGGTAAAAAGCTGAAGCTTGCAATTTGGGATACTGCTGGGCAGGAGAGATTCAGAACACTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGTTTATGATGTAACGAGGAGAGACACGTTTACAAACCTTTCTGAGGTATGGGCAAAGGAAATAGATCTATATTCAACCAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACCAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTACAGAATGCAGTGCCAAAACTCGGGTTAATGTACAGCAGTGCTTTGAAGAACTTGTTTTAAAGATTCTTGATACGCCCAGCCTTTTGTCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAACCTCCACAGTCTGATGCATCCACGAGCAGTTGTTGCTGA

Protein sequence

MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASTSSCC*

Homology

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BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.8e-97
Identity = 173/209 (82.78%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

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BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.4e-83
Identity = 144/209 (68.90%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S + EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL +VW KEI+LYSTNQ+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.3e-74
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S + EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

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BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.4e-59
Identity = 115/179 (64.25%), Postives = 136/179 (75.98%), Query Frame = 0


Query: 11  DYLFKLLMIGDSGVGKSSLLLSFTSDNFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTA 70
           DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 71  GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDCIKMLVGNKV 130
           GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 131 DKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKG 189
           D  + R V+ +EG D AR +GCLF E SA+  + V Q FEEL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

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BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.5e-54
Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = 0


Query: 15  KLLMIGDSGVGKSSLLLSFTSDNFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTAGQER 74
           K+L+IG+SGVGKSSLLL FT D F+ +L+ TIGVDFKVK +   G + KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQER 69

Query: 75  FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDCIKMLVGNKVDKES 134
           FRTLT SYYRGAQG+I+VYDVT+RDTFT L E W  E++ Y T  D +KMLVGNK+DK++
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKIDKDN 129

Query: 135 YRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNI 194
            R V + EG+  AR++  LF E SAKTR  VQ  FEELV KIL TP L     +     +
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQL 189

Query: 195 FKEKPPQSDASTSSC 209
              +P +  A    C
Sbjct: 190 SDNEPQRQGACGGYC 202

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BLAST of CsGy2G015800 vs. NCBI nr
Match: XP_004147350.1 (ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa_016939 [Cucumis sativus])

HSP 1 Score: 421 bits (1081), Expect = 2.22e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQSDASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

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BLAST of CsGy2G015800 vs. NCBI nr
Match: XP_008460888.1 (PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-related protein RABC1-like [Cucumis melo var. makuwa] >TYK02071.1 ras-related protein RABC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 414 bits (1064), Expect = 8.70e-146
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQSDAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of CsGy2G015800 vs. NCBI nr
Match: XP_022156664.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 410 bits (1053), Expect = 4.14e-144
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of CsGy2G015800 vs. NCBI nr
Match: XP_038901438.1 (ras-related protein RABC1-like [Benincasa hispida])

HSP 1 Score: 409 bits (1051), Expect = 8.35e-144
Identity = 202/209 (96.65%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFT+D+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTTDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWA+EIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAREIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of CsGy2G015800 vs. NCBI nr
Match: XP_022971628.1 (ras-related protein RABC1-like [Cucurbita maxima])

HSP 1 Score: 404 bits (1039), Expect = 5.64e-142
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLFTECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVR+NIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL
Match: A0A0A0LQC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 1.08e-148
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQSDASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL
Match: A0A5D3BQN6 (Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00560 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 4.21e-146
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQSDAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL
Match: A0A1S3CDH6 (ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 4.21e-146
Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTN DC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNPDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQSDAS SSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL
Match: A0A6J1DU73 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.00e-144
Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVRRNIFKEKPPQ DASTSSCC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL
Match: A0A6J1I7F2 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 2.73e-142
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNLSEVWAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEVWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES+RTVTKKEGIDMARE GCLFTECSAKTRVNVQQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
           LLSEGSKGVR+NIFKEKPPQ DAS SSCC
Sbjct: 181 LLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of CsGy2G015800 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-98
Identity = 173/209 (82.78%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CsGy2G015800 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-98
Identity = 173/209 (82.78%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CsGy2G015800 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-98
Identity = 173/209 (82.78%), Postives = 192/209 (91.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS+ F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLS++WAKEIDLYSTNQDC
Sbjct: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVDKES R V+KKEGID AREYGCLF ECSAKTRVNV+QCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           L +EGS G ++NIFK+ P Q+ +++SS C
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of CsGy2G015800 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-84
Identity = 144/209 (68.90%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S + EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL +VW KEI+LYSTNQ+C
Sbjct: 61  LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           ++MLVGNKVD+ES R V+++EGI +A+E  C+F ECSA+TR NV+QCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           LL EGS  V+RNI K+KP     + S CC
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CsGy2G015800 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 278.5 bits (711), Expect = 4.5e-75
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S + EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
           LKL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NL+++WAKEI+LYSTN DC
Sbjct: 61  LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120

Query: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
           IKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180

Query: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 210
           LL EGS  V+R       P   A    CC
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCC 203

The following BLAST results are available for this feature:

BLAST of CsGy2G015800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	1.8e-97	82.78	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	7.4e-83	68.90	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	6.3e-74	64.11	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	3.4e-59	64.25	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	9.5e-54	56.92	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of CsGy2G015800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147350.1	2.22e-148	100.00	ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa...	[more]
XP_008460888.1	8.70e-146	98.56	PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-relat...	[more]
XP_022156664.1	4.14e-144	97.13	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_038901438.1	8.35e-144	96.65	ras-related protein RABC1-like [Benincasa hispida]	[more]
XP_022971628.1	5.64e-142	95.69	ras-related protein RABC1-like [Cucurbita maxima]	[more]

BLAST of CsGy2G015800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQC6	1.08e-148	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1	[more]
A0A5D3BQN6	4.21e-146	98.56	Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDH6	4.21e-146	98.56	ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1	[more]
A0A6J1DU73	2.00e-144	97.13	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE...	[more]
A0A6J1I7F2	2.73e-142	95.69	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 ...	[more]

BLAST of CsGy2G015800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	1.3e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	1.3e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	1.3e-98	82.78	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	5.3e-84	68.90	RAB GTPase homolog C2A	[more]
AT3G09910.1	4.5e-75	64.11	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 36..52 score: 29.26 coord: 153..175 score: 40.38 coord: 14..35 score: 52.76 coord: 118..131 score: 42.87 coord: 54..76 score: 51.16
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..204 e-value: 1.1E-4 score: 17.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..179 e-value: 0.0015 score: 5.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..178 e-value: 3.0E-96 score: 335.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..178 e-value: 1.4E-30 score: 117.6
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..209
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 1..209
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..176 score: 9.785789
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..209 score: 32.119759
None	No IPR available	CDD	cd01863	Rab18	coord: 14..175 e-value: 1.20508E-103 score: 293.833
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..178 e-value: 1.5E-14 score: 64.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..176 e-value: 2.6E-55 score: 186.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..209 score: 17.870987
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..209 e-value: 1.4E-63 score: 215.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..190
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 7.2E-30 score: 101.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G015800.1	CsGy2G015800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding