CsGy2G015000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G015000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 14993891 .. 14994310 (-)
RNA-Seq Expression	CsGy2G015000
Synteny	CsGy2G015000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGAAAGCTTCGTGGAGTTTCTTGCATTGATAGACTCACGCGGCCTTTTCGATACCCGAAGAGCGTACCCGTCACACGACTCCCTGATGGACCTCGTAACGTGTCTGATAGACCTGATGGGAGGGATGGGATCTTGCATGCTGGTGTTATGATAGGGAAGGATCGGAATACGGATCGAAAGACTCGAAAGACTTTGGTTTTGTGTTTCTTACGTTTGGATGGGGGAACGAGAGAAGAGGAGGATGAGGAGGAACAAGATTGTGGTGGTGGTGGAGGAGGTGGGGGTGGAGCTGAAAAACAATCTGGAGATAGTGGTTGGAGGGAAGTGGTGGCGGTGATGGTGACGATAGCGGTGGAGGTGGAGGTGGATTTTGGGTCTCCCATGCATGAAGGGAAGGTAATAATGAAGCAATAA

mRNA sequence

ATGCTAGGAAAGCTTCGTGGAGTTTCTTGCATTGATAGACTCACGCGGCCTTTTCGATACCCGAAGAGCGTACCCGTCACACGACTCCCTGATGGACCTCGTAACGTGTCTGATAGACCTGATGGGAGGGATGGGATCTTGCATGCTGGTGTTATGATAGGGAAGGATCGGAATACGGATCGAAAGACTCGAAAGACTTTGGTTTTGTGTTTCTTACGTTTGGATGGGGGAACGAGAGAAGAGGAGGATGAGGAGGAACAAGATTGTGGTGGTGGTGGAGGAGGTGGGGGTGGAGCTGAAAAACAATCTGGAGATAGTGGTTGGAGGGAAGTGGTGGCGGTGATGGTGACGATAGCGGTGGAGGTGGAGGTGGATTTTGGGTCTCCCATGCATGAAGGGAAGGTAATAATGAAGCAATAA

Coding sequence (CDS)

ATGCTAGGAAAGCTTCGTGGAGTTTCTTGCATTGATAGACTCACGCGGCCTTTTCGATACCCGAAGAGCGTACCCGTCACACGACTCCCTGATGGACCTCGTAACGTGTCTGATAGACCTGATGGGAGGGATGGGATCTTGCATGCTGGTGTTATGATAGGGAAGGATCGGAATACGGATCGAAAGACTCGAAAGACTTTGGTTTTGTGTTTCTTACGTTTGGATGGGGGAACGAGAGAAGAGGAGGATGAGGAGGAACAAGATTGTGGTGGTGGTGGAGGAGGTGGGGGTGGAGCTGAAAAACAATCTGGAGATAGTGGTTGGAGGGAAGTGGTGGCGGTGATGGTGACGATAGCGGTGGAGGTGGAGGTGGATTTTGGGTCTCCCATGCATGAAGGGAAGGTAATAATGAAGCAATAA

Protein sequence

MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTDRKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAVEVEVDFGSPMHEGKVIMKQ*

Homology

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BLAST of CsGy2G015000 vs. NCBI nr
Match: KAA0045885.1 (hypothetical protein E6C27_scaffold243G004210 [Cucumis melo var. makuwa] >TYK13702.1 hypothetical protein E5676_scaffold299G002260 [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (631), Expect = 4.31e-82
Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTD 60
           MLGKLRGVSC+DRLTRPF YPKSVPVTRLPDGPRNVSDRPDG DGILHAGVM+GKDRNTD
Sbjct: 1   MLGKLRGVSCMDRLTRPFLYPKSVPVTRLPDGPRNVSDRPDGSDGILHAGVMMGKDRNTD 60

Query: 61  RKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAV 120
           RKTRKTLVL FLRLDGGTREEEDEEE+DCGGGGGGGGGAE+Q  DSG REVV  MVTIAV
Sbjct: 61  RKTRKTLVLFFLRLDGGTREEEDEEEEDCGGGGGGGGGAEEQYADSGSREVVGEMVTIAV 120

Query: 121 EVEVDFGSPMHEGKVIMKQ 139
           EV  DFGSPMHEGKVIMKQ
Sbjct: 121 EV--DFGSPMHEGKVIMKQ 137

[Close]

BLAST of CsGy2G015000 vs. NCBI nr
Match: KAG6605299.1 (hypothetical protein SDJN03_02616, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (332), Expect = 6.65e-37
Identity = 75/122 (61.48%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 11  IDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHA-GVMIGKDRNTDRKTRKTLVL 70
           +DRLTRPFRYP SVPVTR PD   +VSD PDG DGILHA GVM+GKDRNTDR TR TLVL
Sbjct: 1   MDRLTRPFRYPNSVPVTRFPDCVSSVSDMPDGSDGILHAAGVMMGKDRNTDRNTRNTLVL 60

Query: 71  CFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAVEVEVDFGSP 130
            F   DGGTREE DE ++ CGG GGG GGAE   GD             +    VDFGSP
Sbjct: 61  FFFLFDGGTREE-DEVKEGCGGSGGGCGGAEDFGGDCS-----------SGRAAVDFGSP 110

[Close]

BLAST of CsGy2G015000 vs. NCBI nr
Match: KAE8673967.1 (hypothetical protein F3Y22_tig00111769pilonHSYRG00194 [Hibiscus syriacus])

HSP 1 Score: 68.9 bits (167), Expect = 3.93e-11
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 3   GKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSD-RPDGRDGILHAGVMIGKDRNTDR 62
           G+  G+S I+R+T P RYPK V +TR+P+    VSD +P G+   +  GV +GK+R T+R
Sbjct: 80  GRHLGLSWIERVTLPLRYPKRVSITRVPELVTWVSDCKPVGQTRNVREGVRMGKERKTER 139

Query: 63  KTRKTLVLCFL---RLDGGTREEEDEEEQDCGGGGG 94
           K RKT   C L     DG  RE+       CGG GG
Sbjct: 140 KARKTRHFCLLPNFNADGSMREKGC-----CGGDGG 170

[Close]

BLAST of CsGy2G015000 vs. NCBI nr
Match: RXH93837.1 (hypothetical protein DVH24_015904 [Malus domestica])

HSP 1 Score: 57.4 bits (137), Expect = 9.66e-07
Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 2   LGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDR-PDGRDGILHAGVMIGKDRNTD 61
           +G+  G+S I RLT   R+P  VPV R+P        R P    GILH G MIG DR T 
Sbjct: 96  MGRHLGLSWITRLTLALRHPNRVPVIRVPPWRCPSPIRFPWSETGILHEGDMIGNDRKTA 155

Query: 62  RKTRKTLVLCFLRLDG 76
           RK RK+    FL LDG
Sbjct: 156 RKRRKS----FLGLDG 167

[Close]

BLAST of CsGy2G015000 vs. NCBI nr
Match: KYP69353.1 (hypothetical protein KK1_008543 [Cajanus cajan])

HSP 1 Score: 53.1 bits (126), Expect = 1.75e-05
Identity = 42/112 (37.50%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 1   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPR------------NVSDRPDGRDGILH 60
           M G+  G SC +RLTRP R P  VP T  P                +V+    G  G L 
Sbjct: 46  MEGRHLGFSCTERLTRPLRRPNRVPETLAPLLTLLRLFWWWWCWWPSVA----GMAGNLQ 105

Query: 61  AGVMIGKDRNTDRKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAE 100
            GVM+G++R T+R  R  L       +G TRE         GGGGGGGG A+
Sbjct: 106 EGVMMGRERKTERNMRTILGFWRFLREGWTRE------MGSGGGGGGGGDAD 147

[Close]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL
Match: A0A0A0LMU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296020 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 1.14e-93
Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTD 60
           MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTD
Sbjct: 7   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTD 66

Query: 61  RKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAV 120
           RKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAV
Sbjct: 67  RKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAV 126

Query: 121 EVEVDFGSPMHEGKV 135
           EVEVDFGSPMHEGK+
Sbjct: 127 EVEVDFGSPMHEGKI 141

[Close]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL
Match: A0A5D3CQN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002260 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.09e-82
Identity = 125/139 (89.93%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDRPDGRDGILHAGVMIGKDRNTD 60
           MLGKLRGVSC+DRLTRPF YPKSVPVTRLPDGPRNVSDRPDG DGILHAGVM+GKDRNTD
Sbjct: 1   MLGKLRGVSCMDRLTRPFLYPKSVPVTRLPDGPRNVSDRPDGSDGILHAGVMMGKDRNTD 60

Query: 61  RKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAEKQSGDSGWREVVAVMVTIAV 120
           RKTRKTLVL FLRLDGGTREEEDEEE+DCGGGGGGGGGAE+Q  DSG REVV  MVTIAV
Sbjct: 61  RKTRKTLVLFFLRLDGGTREEEDEEEEDCGGGGGGGGGAEEQYADSGSREVVGEMVTIAV 120

Query: 121 EVEVDFGSPMHEGKVIMKQ 139
           EV  DFGSPMHEGKVIMKQ
Sbjct: 121 EV--DFGSPMHEGKVIMKQ 137

[Close]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL
Match: A0A6A2YFV7 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111769pilonHSYRG00194 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.90e-11
Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 3   GKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSD-RPDGRDGILHAGVMIGKDRNTDR 62
           G+  G+S I+R+T P RYPK V +TR+P+    VSD +P G+   +  GV +GK+R T+R
Sbjct: 80  GRHLGLSWIERVTLPLRYPKRVSITRVPELVTWVSDCKPVGQTRNVREGVRMGKERKTER 139

Query: 63  KTRKTLVLCFL---RLDGGTREEEDEEEQDCGGGGG 94
           K RKT   C L     DG  RE+       CGG GG
Sbjct: 140 KARKTRHFCLLPNFNADGSMREKGC-----CGGDGG 170

[Close]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL
Match: A0A498JGA1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_015904 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.67e-07
Identity = 36/76 (47.37%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 2   LGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPRNVSDR-PDGRDGILHAGVMIGKDRNTD 61
           +G+  G+S I RLT   R+P  VPV R+P        R P    GILH G MIG DR T 
Sbjct: 96  MGRHLGLSWITRLTLALRHPNRVPVIRVPPWRCPSPIRFPWSETGILHEGDMIGNDRKTA 155

Query: 62  RKTRKTLVLCFLRLDG 76
           RK RK+    FL LDG
Sbjct: 156 RKRRKS----FLGLDG 167

[Close]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL
Match: A0A151TQN2 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008543 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.47e-06
Identity = 42/112 (37.50%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 1   MLGKLRGVSCIDRLTRPFRYPKSVPVTRLPDGPR------------NVSDRPDGRDGILH 60
           M G+  G SC +RLTRP R P  VP T  P                +V+    G  G L 
Sbjct: 46  MEGRHLGFSCTERLTRPLRRPNRVPETLAPLLTLLRLFWWWWCWWPSVA----GMAGNLQ 105

Query: 61  AGVMIGKDRNTDRKTRKTLVLCFLRLDGGTREEEDEEEQDCGGGGGGGGGAE 100
            GVM+G++R T+R  R  L       +G TRE         GGGGGGGG A+
Sbjct: 106 EGVMMGRERKTERNMRTILGFWRFLREGWTRE------MGSGGGGGGGGDAD 147

The following BLAST results are available for this feature:

BLAST of CsGy2G015000 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G015000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045885.1	4.31e-82	89.93	hypothetical protein E6C27_scaffold243G004210 [Cucumis melo var. makuwa] >TYK137...	[more]
KAG6605299.1	6.65e-37	61.48	hypothetical protein SDJN03_02616, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8673967.1	3.93e-11	43.75	hypothetical protein F3Y22_tig00111769pilonHSYRG00194 [Hibiscus syriacus]	[more]
RXH93837.1	9.66e-07	47.37	hypothetical protein DVH24_015904 [Malus domestica]	[more]
KYP69353.1	1.75e-05	37.50	hypothetical protein KK1_008543 [Cajanus cajan]	[more]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMU0	1.14e-93	99.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296020 PE=4 SV=1	[more]
A0A5D3CQN7	2.09e-82	89.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6A2YFV7	1.90e-11	43.75	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111769pilon...	[more]
A0A498JGA1	4.67e-07	47.37	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_015904 PE=4 SV=1	[more]
A0A151TQN2	8.47e-06	37.50	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_008543 PE=4 SV=1	[more]

BLAST of CsGy2G015000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G015000.1	CsGy2G015000.1	mRNA