|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGGTCATAGAAAAGGAAGCTTTTCTAGTAACAAGCTTCCATTGAAAAAGGGACCCATCAGCTCAGAGAAAAGGTAGAGATTCTGAAATGGGTGTTTTTAGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGTAAGCGATTGAGAAGTGGGAAAGTGGCCAAATTAGAGATTTCAAAGGGGAAACATGAGTAGAATGGTTAAAAGAGTGTGTTGTTATTATATAAGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA mRNA sequence ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA Coding sequence (CDS) ATGAAGGGAGCTAAAATGGAAGAAACCGATCAATCTGTAGCTCAGCACAGAGGTTATGGAAAGGCTGCAACAGACCCACAAAGAAAAAACGAAAAATTTGGTGAGAAATGGACAGGTCGTTGGGGTTTGAATGAAGAGAAGAAAATAAAAGTCCAAATCGTCAACTGGGAGAGTCGCCGGCCAAGTTCTCTGGTTTTCAGGCAACCGGTAATGGGTTCTGCATTATCTCTACATAAATGGTCGATTTCTCAAGGAAAAACGAAGGAGATGATTCAATTTAACAAACTTCTATGA Protein sequence MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRRPSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL*
Homology
BLAST of CsGy2G014425 vs. NCBI nr
Match: KGN62028.1 (hypothetical protein Csa_006660 [Cucumis sativus]) HSP 1 Score: 197 bits (500), Expect = 2.00e-63 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query: 1 MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR
Sbjct: 1 MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
Query: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97
PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL
Sbjct: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97
BLAST of CsGy2G014425 vs. ExPASy TrEMBL
Match: A0A0A0LJU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287100 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 9.68e-64 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query: 1 MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR
Sbjct: 1 MKGAKMEETDQSVAQHRGYGKAATDPQRKNEKFGEKWTGRWGLNEEKKIKVQIVNWESRR 60
Query: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97
PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL
Sbjct: 61 PSSLVFRQPVMGSALSLHKWSISQGKTKEMIQFNKLL 97
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN62028.1 | 2.00e-63 | 100.00 | hypothetical protein Csa_006660 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LJU1 | 9.68e-64 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287100 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..35 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
