CsGy2G013750 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G013750
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTransmembrane protein
LocationGy14Chr2: 14057560 .. 14058828 (-)
RNA-Seq ExpressionCsGy2G013750
SyntenyCsGy2G013750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTCGAAGCAGGTTCCTCTCGTTTCCCATGGTAATGGGTGCGGTCATGTAAGTGTTCTTCGCAATTTTACATCCCTTCCTTTTACCCTTTATCAATTAATCAATCAATTTAGAGATTTGATCTATTGATTTTGACGTTCGAATTGCTATCTACCTATCATTGATTGATTGAATTTGAAATTTGATTCAATAATTTTGTTATCTTCCCTCTCAATTCTTGTTTCTCCATTTTGGATGGGTTCAGTTTGCTTCTCTGTCTATTGTAATAAGAATTTCGTTATTGAATATAACAATAATGTGTGCAAAAACTGAAGAATGTTGAAAGGTTTGAAGTTCTTGGGTTTAGTTAGGGAAGATTTCTAATTTACTTACAGTGTCTCAAGTTTTGTTAATGCAAGATGTTTATGAAGGCTGGAAAACAACGAAATTTTATATTTGTGAAGTTTTTACAGAAAGGGGTTCTGTTCATATTCGACTTTCTATAGGTTGTAGCATTAGTTGTTTATGAATTAATATTGTTTTCCATTTTGGTGATAAGCTCTGTGTTTCAACAATTCATTCTTGGAAGTTTTGCACAGTGTTTTTAAGCTCTTGATGAGTTTTGGGCCGAAAGTAAAACCATTGATTCAGAATGGAAAATTACTTGACAAGTTGATTAGACTGTAATATATTTGTTGCTTGCAGCATCGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGCTGGAAGAAGAGGCGGCCGCAAAGGAGACAGGTACTAGTACTACCAGCTCAACTTAGCATAGGTCAGGATTCGGGATAGTCATGCTTAGCAACATGGATATGTAGAGCTAGGAGAAATATGTTTTCGATGAAACAATCATTGAATATGTATAATCTTGCATGGATATTTATGCATAAAACACCCAAGAATTTGCAAAGGTTATCTTCTTTTACTTGGGACACCATGTGGATTATCTACAAAAAAGAATGGTCCAATAGGAACCAACAAGGCCTTCCCTTTTGGCTAAACCACTAAAAGGTATGTTCGGTTGTAATTTTGACAATGTTAAACTTAAATTCACTTTTTTCACTGCCAAAGTCATTTCAAACAGCTCTTTTCACCGTGATCTCTATCTCTTGTTCTCGTGATCGCTTTCCTCATTTTCAGGTAGTGGTTTCTTAATGATTTTGTTGTTTATTTGTGTTCTTTTGTCTCAATTTGTGGAAGTAGTTCTGGGGAACTTCAGATGGAGTTGA

mRNA sequence

ATGTTGGGTCGAAGCAGGTTCCTCTCGTTTCCCATGGTAATGGGTGCGGTCATCATCGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGCTGGAAGAAGAGGCGGCCGCAAAGGAGACAGGTAGTGGTTTCTTAATGATTTTGTTGTTTATTTGTGTTCTTTTGTCTCAATTTGTGGAAGTAGTTCTGGGGAACTTCAGATGGAGTTGA

Coding sequence (CDS)

ATGTTGGGTCGAAGCAGGTTCCTCTCGTTTCCCATGGTAATGGGTGCGGTCATCATCGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAAAAAGAAGCTGGAAGAAGAGGCGGCCGCAAAGGAGACAGGTAGTGGTTTCTTAATGATTTTGTTGTTTATTTGTGTTCTTTTGTCTCAATTTGTGGAAGTAGTTCTGGGGAACTTCAGATGGAGTTGA

Protein sequence

MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSGFLMILLFICVLLSQFVEVVLGNFRWS*
Homology
BLAST of CsGy2G013750 vs. NCBI nr
Match: KAE8651909.1 (hypothetical protein Csa_006142 [Cucumis sativus])

HSP 1 Score: 136 bits (342), Expect = 4.83e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 12 MVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSGFLMILLFICVLLSQFVEVV 71
          MVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSGFLMILLFICVLLSQFVEVV
Sbjct: 1  MVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSGFLMILLFICVLLSQFVEVV 60

Query: 72 LGNFRWS 78
          LGNFRWS
Sbjct: 61 LGNFRWS 67

BLAST of CsGy2G013750 vs. NCBI nr
Match: KAA0045764.1 (hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa] >TYJ99518.1 hypothetical protein E5676_scaffold123G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (258), Expect = 2.44e-27
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETG+ 
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTS 52

BLAST of CsGy2G013750 vs. NCBI nr
Match: XP_022149438.1 (uncharacterized protein LOC111017867 [Momordica charantia])

HSP 1 Score: 97.8 bits (242), Expect = 2.06e-24
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKLEEEA AK+TG+ 
Sbjct: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTS 52

BLAST of CsGy2G013750 vs. NCBI nr
Match: ONI02716.1 (hypothetical protein PRUPE_6G217600 [Prunus persica] >ONI02717.1 hypothetical protein PRUPE_6G217600 [Prunus persica] >VVA23363.1 PREDICTED: transmembrane [Prunus dulcis])

HSP 1 Score: 94.4 bits (233), Expect = 1.48e-23
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GRSRFLSFPMV+GAV+IGVVSGKAIFGPPLDEYWKKK +EEAAAKET + 
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDAS 52

BLAST of CsGy2G013750 vs. NCBI nr
Match: CBI23537.3 (unnamed protein product, partial [Vitis vinifera] >CBI38496.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 93.6 bits (231), Expect = 2.98e-23
Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GR RFLSFP+V+GAV+IGVVSGKAIFGPPLDEYWKKKL+EEAAAKET + 
Sbjct: 1  MFGRRRFLSFPLVIGAVVIGVVSGKAIFGPPLDEYWKKKLQEEAAAKETDAS 52

BLAST of CsGy2G013750 vs. ExPASy TrEMBL
Match: A0A5D3BMY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00850 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 1.18e-27
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETG+ 
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTS 52

BLAST of CsGy2G013750 vs. ExPASy TrEMBL
Match: A0A0A0LPX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279280 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 1.18e-27
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETG+ 
Sbjct: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGTS 52

BLAST of CsGy2G013750 vs. ExPASy TrEMBL
Match: A0A6J1D6S8 (uncharacterized protein LOC111017867 OS=Momordica charantia OX=3673 GN=LOC111017867 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.95e-25
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKLEEEA AK+TG+ 
Sbjct: 1  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLEEEATAKKTGTS 52

BLAST of CsGy2G013750 vs. ExPASy TrEMBL
Match: A0A251NTQ5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G217600 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.14e-24
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GRSRFLSFPMV+GAV+IGVVSGKAIFGPPLDEYWKKK +EEAAAKET + 
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDAS 52

BLAST of CsGy2G013750 vs. ExPASy TrEMBL
Match: A0A5E4F5S4 (PREDICTED: transmembrane OS=Prunus dulcis OX=3755 GN=ALMOND_2B027815 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.14e-24
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAAAKETGSG 52
          M GRSRFLSFPMV+GAV+IGVVSGKAIFGPPLDEYWKKK +EEAAAKET + 
Sbjct: 1  MFGRSRFLSFPMVIGAVVIGVVSGKAIFGPPLDEYWKKKQQEEAAAKETDAS 52

BLAST of CsGy2G013750 vs. TAIR 10
Match: AT5G65880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 5.7e-15
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 1  MLGRSRFLSFPMVMGAVIIGVVSGKAIFGPPLDEYWKKKLEEEAA--AKE 49
          M  R+RFLS PMV+GAV+IGVVSGKAIFGPPLD+YWK+KLE E A  AKE
Sbjct: 1  MFRRNRFLSLPMVIGAVVIGVVSGKAIFGPPLDQYWKEKLEREEAVVAKE 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8651909.14.83e-40100.00hypothetical protein Csa_006142 [Cucumis sativus][more]
KAA0045764.12.44e-2796.15hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa] >TYJ995... [more]
XP_022149438.12.06e-2488.46uncharacterized protein LOC111017867 [Momordica charantia][more]
ONI02716.11.48e-2384.62hypothetical protein PRUPE_6G217600 [Prunus persica] >ONI02717.1 hypothetical pr... [more]
CBI23537.32.98e-2382.69unnamed protein product, partial [Vitis vinifera] >CBI38496.3 unnamed protein pr... [more]
Match NameE-valueIdentityDescription
A0A5D3BMY91.18e-2796.15Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LPX11.18e-2796.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279280 PE=4 SV=1[more]
A0A6J1D6S89.95e-2588.46uncharacterized protein LOC111017867 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A251NTQ57.14e-2484.62Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G217600 PE=4 SV=1[more]
A0A5E4F5S47.14e-2484.62PREDICTED: transmembrane OS=Prunus dulcis OX=3755 GN=ALMOND_2B027815 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G65880.15.7e-1576.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36815BNAC03G48760D PROTEINcoord: 2..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G013750.2CsGy2G013750.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane