CsGy2G013305 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G013305
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 13082490 .. 13082885 (+)
RNA-Seq ExpressionCsGy2G013305
SyntenyCsGy2G013305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGTCGAAGAAGCCATGGTCGATTACAGAGACACTAGATGGAAGCAAAGAATTGGGTCTAAAGTTGGATGCTACAGAGATGTTATTTGATTCCTCGTTTCTTCTTAACTATTTTCCAGAACAGAGTGGGAAAGCAAAAATCACCATGTTTGACGTGGTTTCAGAGAAAAGTTTTAAAGCAACAATGGAAAGGAAAAGCGCTTCAAACCAATTTCTTATTACGTGGAAAAAAGACTTCGTAAAAAACATAAACTATAAGAGTGGAGATGAAATTTTATTGTATTGGGAACCTCAAATCAAAAGTCTATGTTTTGAGATTGTAAGGTGTTCCGCTCTTAGAACTTATCCGCAAATGTCCGGTCAATACCATTCGTATAATTATCGTTCCTAG

mRNA sequence

ATGGAGCAGTCGAAGAAGCCATGGTCGATTACAGAGACACTAGATGGAAGCAAAGAATTGGGTCTAAAGTTGGATGCTACAGAGATGTTATTTGATTCCTCGTTTCTTCTTAACTATTTTCCAGAACAGAGTGGGAAAGCAAAAATCACCATGTTTGACGTGGTTTCAGAGAAAAGTTTTAAAGCAACAATGGAAAGGAAAAGCGCTTCAAACCAATTTCTTATTACGTGGAAAAAAGACTTCGTAAAAAACATAAACTATAAGAGTGGAGATGAAATTTTATTGTATTGGGAACCTCAAATCAAAAGTCTATGTTTTGAGATTGTAAGGTGTTCCGCTCTTAGAACTTATCCGCAAATGTCCGGTCAATACCATTCGTATAATTATCGTTCCTAG

Coding sequence (CDS)

ATGGAGCAGTCGAAGAAGCCATGGTCGATTACAGAGACACTAGATGGAAGCAAAGAATTGGGTCTAAAGTTGGATGCTACAGAGATGTTATTTGATTCCTCGTTTCTTCTTAACTATTTTCCAGAACAGAGTGGGAAAGCAAAAATCACCATGTTTGACGTGGTTTCAGAGAAAAGTTTTAAAGCAACAATGGAAAGGAAAAGCGCTTCAAACCAATTTCTTATTACGTGGAAAAAAGACTTCGTAAAAAACATAAACTATAAGAGTGGAGATGAAATTTTATTGTATTGGGAACCTCAAATCAAAAGTCTATGTTTTGAGATTGTAAGGTGTTCCGCTCTTAGAACTTATCCGCAAATGTCCGGTCAATACCATTCGTATAATTATCGTTCCTAG

Protein sequence

MEQSKKPWSITETLDGSKELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSFKATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQMSGQYHSYNYRS*
Homology
BLAST of CsGy2G013305 vs. NCBI nr
Match: KAE8651895.1 (hypothetical protein Csa_006112 [Cucumis sativus])

HSP 1 Score: 264 bits (674), Expect = 7.03e-89
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0

Query: 1   MEQSKKPWSITETLDGSKELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSF 60
           MEQSKKPWSITETLDGSKELGLKLDA EMLF+SSFLLNYFPEQSGKAKITMFDVVSEKSF
Sbjct: 1   MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSF 60

Query: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120
           KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM
Sbjct: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120

Query: 121 SGQYHSYNYRS 131
           SGQYHSYNYRS
Sbjct: 121 SGQYHSYNYRS 131

BLAST of CsGy2G013305 vs. NCBI nr
Match: KAE8651896.1 (hypothetical protein Csa_006487 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 1.31e-84
Identity = 123/131 (93.89%), Postives = 127/131 (96.95%), Query Frame = 0

Query: 1   MEQSKKPWSITETLDGSKELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSF 60
           MEQ KKPWSITETLDGSKELGLKLDA EMLF+SSFLLNYFPEQ+GKAKITMFDVVSEKSF
Sbjct: 1   MEQPKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQTGKAKITMFDVVSEKSF 60

Query: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120
           KATMERKSASNQFLITWKKDFVKNINYK+GDEILLYWEPQIKSLCFEIV+CSALRTYPQM
Sbjct: 61  KATMERKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCFEIVKCSALRTYPQM 120

Query: 121 SGQYHSYNYRS 131
           SGQY SYNY S
Sbjct: 121 SGQYRSYNYSS 131

BLAST of CsGy2G013305 vs. NCBI nr
Match: TXG69188.1 (hypothetical protein EZV62_004123 [Acer yangbiense])

HSP 1 Score: 48.5 bits (114), Expect = 6.22e-04
Identity = 32/121 (26.45%), Postives = 58/121 (47.93%), Query Frame = 0

Query: 1   MEQSKKPWSITETL------DGSKELGLK-LDATEMLFDSSFLLNYFPEQSGKAKITMFD 60
           +E  +  W I +TL      D S+ L  K    T +L   +  + Y      + +++++D
Sbjct: 22  LEIYRDEWKIKKTLTKSDLGDQSRLLIYKGCVETHVLPSMADAVKYVLHSKDRLRVSVWD 81

Query: 61  VVSEKSFKATMERKSASNQFLIT--WKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRC 112
             ++   +   +   +S  +++T  WKKDFVK  N K  D+I L+W+P   S  F ++  
Sbjct: 82  YDTQSLHQLDFKYWPSSKSYVLTLKWKKDFVKRRNLKENDQIALFWDPDASSFWFRVLHQ 141

BLAST of CsGy2G013305 vs. ExPASy TrEMBL
Match: A0A0A0LD04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.40e-89
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0

Query: 1   MEQSKKPWSITETLDGSKELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSF 60
           MEQSKKPWSITETLDGSKELGLKLDA EMLF+SSFLLNYFPEQSGKAKITMFDVVSEKSF
Sbjct: 1   MEQSKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSF 60

Query: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120
           KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM
Sbjct: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120

Query: 121 SGQYHSYNYRS 131
           SGQYHSYNYRS
Sbjct: 121 SGQYHSYNYRS 131

BLAST of CsGy2G013305 vs. ExPASy TrEMBL
Match: A0A0A0LJ50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 2.21e-85
Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0

Query: 1   MEQSKKPWSITETLDGSKELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSF 60
           MEQ KKPWSITETLDGSKELGLKLDA EMLF+SSFLLNYFPEQSGKAKITMFDVVSEKSF
Sbjct: 1   MEQPKKPWSITETLDGSKELGLKLDAAEMLFESSFLLNYFPEQSGKAKITMFDVVSEKSF 60

Query: 61  KATMERKSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSALRTYPQM 120
           KATMERKSASNQFLITWKKDFVKNINYK+GDEILLYWEPQIKSLCFEIV+CSALRTYPQM
Sbjct: 61  KATMERKSASNQFLITWKKDFVKNINYKNGDEILLYWEPQIKSLCFEIVKCSALRTYPQM 120

Query: 121 SGQYHSYNYRS 131
           SGQY SYNY S
Sbjct: 121 SGQYRSYNYSS 131

BLAST of CsGy2G013305 vs. ExPASy TrEMBL
Match: A0A5C7IJ64 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004123 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.01e-04
Identity = 32/121 (26.45%), Postives = 58/121 (47.93%), Query Frame = 0

Query: 1   MEQSKKPWSITETL------DGSKELGLK-LDATEMLFDSSFLLNYFPEQSGKAKITMFD 60
           +E  +  W I +TL      D S+ L  K    T +L   +  + Y      + +++++D
Sbjct: 22  LEIYRDEWKIKKTLTKSDLGDQSRLLIYKGCVETHVLPSMADAVKYVLHSKDRLRVSVWD 81

Query: 61  VVSEKSFKATMERKSASNQFLIT--WKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRC 112
             ++   +   +   +S  +++T  WKKDFVK  N K  D+I L+W+P   S  F ++  
Sbjct: 82  YDTQSLHQLDFKYWPSSKSYVLTLKWKKDFVKRRNLKENDQIALFWDPDASSFWFRVLHQ 141

BLAST of CsGy2G013305 vs. ExPASy TrEMBL
Match: A0A445BIS3 (TF-B3 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A09g043546 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.60e-04
Identity = 30/114 (26.32%), Postives = 51/114 (44.74%), Query Frame = 0

Query: 7   PWSITETLDGS-----KELGLKLDATEMLFDSSFLLNYFPEQSGKAKITMFDVVSEKSFK 66
           PW + + L+ S       L L  +  E L  +  +L Y   Q    ++ ++DV ++    
Sbjct: 6   PWKLKKVLNSSDVGSLSRLLLPKEMAEPLVAA--VLGYDENQKEGMEVEIWDVDTQSMHS 65

Query: 67  ATMER--KSASNQFLITWKKDFVKNINYKSGDEILLYWEPQIKSLCFEIVRCSA 113
              +R   S S  F+  W KDFVK  + KSG E+  +W P      F +++ + 
Sbjct: 66  LVFKRWGSSRSYVFMANWTKDFVKRRSLKSGHEVAFHWNPYANRFHFSVLKSAT 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8651895.17.03e-8998.47hypothetical protein Csa_006112 [Cucumis sativus][more]
KAE8651896.11.31e-8493.89hypothetical protein Csa_006487 [Cucumis sativus][more]
TXG69188.16.22e-0426.45hypothetical protein EZV62_004123 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
A0A0A0LD043.40e-8998.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G401960 PE=4 SV=1[more]
A0A0A0LJ502.21e-8594.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270130 PE=4 SV=1[more]
A0A5C7IJ643.01e-0426.45Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004123 PE=4 SV=1[more]
A0A445BIS37.60e-0426.32TF-B3 domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A09g043546 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 23..124
e-value: 2.9E-7
score: 32.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G013305.1CsGy2G013305.1mRNA