CsGy2G012480 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G012480
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein CASPARIAN STRIP INTEGRITY FACTOR 1
Location	Gy14Chr2: 12383694 .. 12385585 (+)
RNA-Seq Expression	CsGy2G012480
Synteny	CsGy2G012480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTATCTCTATAAGACCCCATCACTTTTGTCCAATAATCCAATGTCCCTTAAATCATACATAAGGAAGCTTCATTTGGGTCTATGCTCTTAGGAAGAAGAAGAAGAAAGAAGAAGAAGAAAGAAAAGAAAAGAAAAGAAAGACCCAACTTCAAAAAAACATATAAAAGTGGTCATATCATTTATAAGGTTGTTTCTACTTTCTATCATATTTTTGAGAATCATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTTTTATCCACCATCTGCATTGCAGGTTGGTTTCTTCTTTCTATGTCCTCTCTTAATTTCTTAATTTGTTTATTTTAAATTCACTTTCATACTTTGTCAAAACATTATTCAACGTAATAGCAGTATATCACTATAAAAGTTTTTCGTGAAAATTCTTGATGCATTTTTCTTTTAATTAAAATCACCAATCACAACAAATCATAGAAGATTAATGTACTTCTTATGATATATATTACCTTGCATATTTCCATTCGATTTCATTTGTCGTGTATGAATCAAACCGATCTTAGTCCAATACTAATTAACTTGTATTTTCTGAAAAGTACTTGAAAGTTTTATCAGTCGAATGTAGTAAAAAAAAAAGGAGCCATAATGATTAGAACCATGTTAGTTTTGAACAACTAAACAAAATATTATTATTTGCATGCGTGTATATAGAATGTATAAGTGGTGCAAATTAAGAATACAACTTTTATGGTTAATAAGTTTTGCTTTTTTTTTTCTTCTTTGTTGGTAACTGAGCTGTTAATTTATTTAATGGCTGATTTTTAGTACATAGATGATTTGAAGTTTTAAATTCTTTGAAATCAATCTACCGTTTTAATTCGTACTATATGTTAGACTAGTTAAAATTGTTATTGGTTTTTAAAGTAACAAAAATAATCTTTACGGTTTCAAAATCACTCACAAATATTATAAACGTATCTTCTCGTATAAAAAGTGATATATGATATTTTTTTGTGTGTAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGTTGCTAAGGGTGGAGTTGTGCATGAGGTTTGTATTTCTTAGTTTTCTTTTTAAAATTTTAATTTTCTTTCATTTAGTTTTAGAATCCCATTATTTGTTTTACTATGTTTTGAATATCAAATTAGTTTAATTATTATCCGTTTGGATTCACTTACCGAAAAAAATATCTTTTTAAAAATTCTTTTTTTTTTGTTACCATGACTCATTGTTTCTAACACTCTATTACACTAAATCTTCATTTTATAAGAAGCTTTCTTTATGAACGTTTTTCTTTTTTTTAAGAGAGAAAATTTGACTTTCATTTTTAAAAGCCTTAATTATATATCAAAAGATCGAGAACTAAATGATTATCAAACAACCAAACACGAGCAATAATTGTTAAGTTAAAGTTTCAAACGTAATATATTTATCATCAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAATAAGGGCACAAAAACAAATATCATCACCAACGTGGGTAGTAACCTTATAAACATATATAAATAATATGAAAAAGTAATATCATGTGTTTCATATAGTGTAAGTATAATATATATGTATTAATCATATATATAATATATAGTGTATAATATATATGGTCATAGACTCACATATATATGAATATAAAGCCTTTGTGATGTTTTGCTTCAGTTACTAAGTACTATATATATATTGTTATATATTGTGTATTTTGGAATATAGGTTGCTTTATATGATTAATTATGCTC

mRNA sequence

GCTTATCTCTATAAGACCCCATCACTTTTGTCCAATAATCCAATGTCCCTTAAATCATACATAAGGAAGCTTCATTTGGGTCTATGCTCTTAGGAAGAAGAAGAAGAAAGAAGAAGAAGAAAGAAAAGAAAAGAAAAGAAAGACCCAACTTCAAAAAAACATATAAAAGTGGTCATATCATTTATAAGGTTGTTTCTACTTTCTATCATATTTTTGAGAATCATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTTTTATCCACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGTTGCTAAGGGTGGAGTTGTGCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAATAAGGGCACAAAAACAAATATCATCACCAACGTGGGTAGTAACCTTATAAACATATATAAATAATATGAAAAAGTAATATCATGTGTTTCATATAGTGTAAGTATAATATATATGTATTAATCATATATATAATATATAGTGTATAATATATATGGTCATAGACTCACATATATATGAATATAAAGCCTTTGTGATGTTTTGCTTCAGTTACTAAGTACTATATATATATTGTTATATATTGTGTATTTTGGAATATAGGTTGCTTTATATGATTAATTATGCTC

Coding sequence (CDS)

ATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTTTTATCCACCATCTGCATTGCAGGTCGACCATCAAAGTTGGTTCCTGAGGTTGTTGCTAAGGGTGGAGTTGTGCATGAGGATGGAAAGAGGAAGACAAGAGGTGAAATGGAAGAGATCATCCATGAAAGACTCTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCCATCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAA

Protein sequence

MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN*

Homology

[Close]

BLAST of CsGy2G012480 vs. ExPASy Swiss-Prot
Match: O65684 (Protein CASPARIAN STRIP INTEGRITY FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CIF2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09
Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 6  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEI 65
          KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE             
Sbjct: 9  KLGFIIFLLVSASAFA-LCSAGRSSILIYSQEDDHPEVVERR--IHE------------- 68

Query: 66 IHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 91
           HER+LR+N++DYG   P P  V+PPFKLIPN
Sbjct: 69 -HERILRMNSRDYGHSSPKPKLVRPPFKLIPN 83

[Close]

BLAST of CsGy2G012480 vs. ExPASy Swiss-Prot
Match: Q84MD2 (Protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=CIF1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.0e-09
Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 6  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLR 65
          KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR
Sbjct: 10 KLGFIF-MIVSASALS-VSFAGRPSIFVHKKI---------NLREEMVERSMHEHERLLR 69

Query: 66 VNTKDYGRYDPSPAFVKPPFKLIPN 91
          +NTKDYG   PSP   +PPFKLIPN
Sbjct: 70 MNTKDYGNNSPSPRLERPPFKLIPN 83

[Close]

BLAST of CsGy2G012480 vs. NCBI nr
Match: XP_011649242.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus] >KGN61823.1 hypothetical protein Csa_006235 [Cucumis sativus])

HSP 1 Score: 180 bits (457), Expect = 4.38e-57
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60
          MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60

Query: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Sbjct: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90

[Close]

BLAST of CsGy2G012480 vs. NCBI nr
Match: XP_008460971.1 (PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo] >KAA0045577.1 uncharacterized protein E6C27_scaffold243G00810 [Cucumis melo var. makuwa] >TYK28817.1 uncharacterized protein E5676_scaffold303G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 167 bits (424), Expect = 4.91e-52
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEII 60
          MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+II
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSSICIAGRPSKLVPEVVANGGVVHEDAKRKTRGDEMEDII 60

Query: 61 HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          HERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 HERLLRVNTKDYGRYDPAPAFVKPPFKLIPN 91

[Close]

BLAST of CsGy2G012480 vs. NCBI nr
Match: XP_038902215.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida])

HSP 1 Score: 167 bits (423), Expect = 6.56e-52
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60
          MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVA GGVVHED KRKTRGEME+I H
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVANGGVVHEDAKRKTRGEMEDI-H 60

Query: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          ERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 ERLLRVNTKDYGRYDPAPAFVKPPFKLIPN 89

[Close]

BLAST of CsGy2G012480 vs. NCBI nr
Match: XP_022146128.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia])

HSP 1 Score: 136 bits (343), Expect = 1.02e-39
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60
          MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+I H
Sbjct: 1  MFLKYKFSFLFFLLVSTSLLSTTFAAGRPSKLVPQA-ATGGVVHQDGRRKRMGEMEDI-H 60

Query: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          ERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 ERLLRANTKDYGRYDPAPAFVKPPFKLIPN 88

[Close]

BLAST of CsGy2G012480 vs. NCBI nr
Match: XP_022986650.1 (protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima])

HSP 1 Score: 135 bits (339), Expect = 1.08e-38
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEII 60
           MF KYKL F+F  LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME++ 
Sbjct: 33  MFFKYKLGFVFFFLLLSTSFFSTICIAGRPSKLVHEVV--NGVVHEGRKRTTRDEMEDV- 92

Query: 61  HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
           HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Sbjct: 93  HERLLRVNTKDYGRYDPSPSFVKPPFKLIPN 120

[Close]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL
Match: A0A0A0LJ22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249780 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 2.12e-57
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60
          MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60

Query: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN
Sbjct: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90

[Close]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL
Match: A0A5A7TUS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00190 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 2.38e-52
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEII 60
          MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+II
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSSICIAGRPSKLVPEVVANGGVVHEDAKRKTRGDEMEDII 60

Query: 61 HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          HERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 HERLLRVNTKDYGRYDPAPAFVKPPFKLIPN 91

[Close]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL
Match: A0A1S3CEV9 (uncharacterized protein LOC103499698 OS=Cucumis melo OX=3656 GN=LOC103499698 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 2.38e-52
Identity = 85/91 (93.41%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRG-EMEEII 60
          MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVPEVVA GGVVHED KRKTRG EME+II
Sbjct: 1  MFLKYKLSFIFILLLSTSFLSSICIAGRPSKLVPEVVANGGVVHEDAKRKTRGDEMEDII 60

Query: 61 HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          HERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 HERLLRVNTKDYGRYDPAPAFVKPPFKLIPN 91

[Close]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL
Match: A0A6J1CXR3 (protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Momordica charantia OX=3673 GN=LOC111015421 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 4.92e-40
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0


Query: 1  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIH 60
          MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+DG+RK  GEME+I H
Sbjct: 1  MFLKYKFSFLFFLLVSTSLLSTTFAAGRPSKLVPQA-ATGGVVHQDGRRKRMGEMEDI-H 60

Query: 61 ERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
          ERLLR NTKDYGRYDP+PAFVKPPFKLIPN
Sbjct: 61 ERLLRANTKDYGRYDPAPAFVKPPFKLIPN 88

[Close]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL
Match: A0A6J1JEM0 (protein CASPARIAN STRIP INTEGRITY FACTOR 1-like OS=Cucurbita maxima OX=3661 GN=LOC111484327 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 5.25e-39
Identity = 73/91 (80.22%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1   MFLKYKLSFIFI-LLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEII 60
           MF KYKL F+F  LLLSTSF STICIAGRPSKLV EVV   GVVHE  KR TR EME++ 
Sbjct: 33  MFFKYKLGFVFFFLLLSTSFFSTICIAGRPSKLVHEVV--NGVVHEGRKRTTRDEMEDV- 92

Query: 61  HERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 90
           HERLLRVNTKDYGRYDPSP+FVKPPFKLIPN
Sbjct: 93  HERLLRVNTKDYGRYDPSPSFVKPPFKLIPN 120

[Close]

BLAST of CsGy2G012480 vs. TAIR 10
Match: AT4G34600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 6  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PEVVAKGGVVHEDGKRKTRGEMEEI 65
          KL FI  LL+S S  + +C AGR S L+       PEVV +   +HE             
Sbjct: 9  KLGFIIFLLVSASAFA-LCSAGRSSILIYSQEDDHPEVVERR--IHE------------- 68

Query: 66 IHERLLRVNTKDYGRYDPSPAFVKPPFKLIPN 91
           HER+LR+N++DYG   P P  V+PPFKLIPN
Sbjct: 69 -HERILRMNSRDYGHSSPKPKLVRPPFKLIPN 83

[Close]

BLAST of CsGy2G012480 vs. TAIR 10
Match: AT2G16385.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 6  KLSFIFILLLSTSFLSTICIAGRPSKLVPEVVAKGGVVHEDGKRKTRGEMEEIIHERLLR 65
          KL FIF +++S S LS +  AGRPS  V + +           R+   E     HERLLR
Sbjct: 10 KLGFIF-MIVSASALS-VSFAGRPSIFVHKKI---------NLREEMVERSMHEHERLLR 69

Query: 66 VNTKDYGRYDPSPAFVKPPFKLIPN 91
          +NTKDYG   PSP   +PPFKLIPN
Sbjct: 70 MNTKDYGNNSPSPRLERPPFKLIPN 83

The following BLAST results are available for this feature:

BLAST of CsGy2G012480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65684	2.4e-09	43.48	Protein CASPARIAN STRIP INTEGRITY FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=CI...	[more]
Q84MD2	4.0e-09	47.06	Protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=CI...	[more]

BLAST of CsGy2G012480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649242.1	4.38e-57	100.00	protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus] >KGN61823.1 hypothe...	[more]
XP_008460971.1	4.91e-52	93.41	PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo] >KAA0045577.1 unc...	[more]
XP_038902215.1	6.56e-52	94.44	protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]	[more]
XP_022146128.1	1.02e-39	77.78	protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]	[more]
XP_022986650.1	1.08e-38	80.22	protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]	[more]

BLAST of CsGy2G012480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ22	2.12e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249780 PE=4 SV=1	[more]
A0A5A7TUS0	2.38e-52	93.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEV9	2.38e-52	93.41	uncharacterized protein LOC103499698 OS=Cucumis melo OX=3656 GN=LOC103499698 PE=...	[more]
A0A6J1CXR3	4.92e-40	77.78	protein CASPARIAN STRIP INTEGRITY FACTOR 1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1JEM0	5.25e-39	80.22	protein CASPARIAN STRIP INTEGRITY FACTOR 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy2G012480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34600.1	1.7e-10	43.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen t...	[more]
AT2G16385.1	2.9e-10	47.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35290:SF2	PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED	coord: 3..90
IPR038974	Protein Casparian strip integrity factor 1/2	PANTHER	PTHR35290	PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED	coord: 3..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G012480.1	CsGy2G012480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:2000067	regulation of root morphogenesis
biological_process	GO:0010447	response to acidic pH
biological_process	GO:0010039	response to iron ion
cellular_component	GO:0048226	Casparian strip
cellular_component	GO:0016021	integral component of membrane