CsGy2G012390 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G012390
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Location	Gy14Chr2: 12299392 .. 12300404 (+)
RNA-Seq Expression	CsGy2G012390
Synteny	CsGy2G012390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAAGAAAATTAAAGGAAAAAAAAAGTGAAAATTAAGATTACTTTGTTTTTTCTTGTTGATTTTTCTCTCTGTTTCCATGATTCCGATTAAGAATTTCTTTGCAGCACCCTCGTGTTTTCTTCCACCGGAGATGATCTTCACGGTTGAGTCGAAAAATTCGGAGGAGGAGTTTGTTTATCAGTAACTTTGATTTGAATTTTACGATATCAATTTTGTGGTTTTTTTCTTTCTTTTTTTCTTTCTTCGAAATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAGGAAAACTATGTAAATCAAAAAGCTCTAAGTTGTGGTAAATCCGCCAAGAAAATTAGGGCTACGGGTTGAAGAAGA

mRNA sequence

TGGAAAGAAAATTAAAGGAAAAAAAAAGTGAAAATTAAGATTACTTTGTTTTTTCTTGTTGATTTTTCTCTCTGTTTCCATGATTCCGATTAAGAATTTCTTTGCAGCACCCTCGTGTTTTCTTCCACCGGAGATGATCTTCACGGTTGAGTCGAAAAATTCGGAGGAGGAGTTTGTTTATCAGTAACTTTGATTTGAATTTTACGATATCAATTTTGTGGTTTTTTTCTTTCTTTTTTTCTTTCTTCGAAATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAGGAAAACTATGTAAATCAAAAAGCTCTAAGTTGTGGTAAATCCGCCAAGAAAATTAGGGCTACGGGTTGAAGAAGA

Coding sequence (CDS)

ATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAG

Protein sequence

MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKSPRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF*

Homology

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BLAST of CsGy2G012390 vs. NCBI nr
Match: XP_011649236.1 (uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hypothetical protein Csa_006191 [Cucumis sativus])

HSP 1 Score: 418 bits (1075), Expect = 7.83e-147
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180
           PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC
Sbjct: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180

Query: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF
Sbjct: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

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BLAST of CsGy2G012390 vs. NCBI nr
Match: XP_008460958.1 (PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 uncharacterized protein E6C27_scaffold243G00730 [Cucumis melo var. makuwa] >TYK28824.1 uncharacterized protein E5676_scaffold303G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 375 bits (962), Expect = 1.55e-129
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEKNNQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREM-QRS 180
           PRTEI    KHIDESR KAS+SVEK+VNNP+ET+RY+R KSE+MEVV REKVDRE+ QRS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           ETEKCKKMVELKEGRRN SY ED MSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

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BLAST of CsGy2G012390 vs. NCBI nr
Match: XP_038900483.1 (uncharacterized protein LOC120087694 [Benincasa hispida])

HSP 1 Score: 322 bits (826), Expect = 7.12e-109
Identity = 187/232 (80.60%), Postives = 205/232 (88.36%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLPTA KNS+EYF
Sbjct: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPTAFKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEFI+NSEKN QK+
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFIQNSEKN-QKT 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180
            R EI    K ID+SR  +SISV+KIVN P+E +RY+RSKSE+MEVV RE +DRE++RSE
Sbjct: 121 RRAEIEYRIKQIDDSRGDSSISVKKIVN-PQEIKRYQRSKSEKMEVVQRENLDRELRRSE 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           TEK KK+V L+E RRN SY EDGMSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 TEKFKKIVGLREDRRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFCGF 230

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BLAST of CsGy2G012390 vs. NCBI nr
Match: XP_022146107.1 (uncharacterized protein LOC111015401 [Momordica charantia])

HSP 1 Score: 287 bits (735), Expect = 4.79e-95
Identity = 167/228 (73.25%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KNS EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYE+FIKNSEKN QK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKN-QKT 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180
              EI    K ID     AS++ +K+VN P+E + Y RS+SE++ V  +E   RE++RSE
Sbjct: 121 RHAEIEYRTKQIDGDG-DASVAAKKVVN-PEEIKLYRRSQSEKIAVAQQENPQRELRRSE 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEE 224
           TEKCKK+V   EG    SY ED MSNEEFRQTVEAFIARQQRL+REEE
Sbjct: 181 TEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEE 225

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BLAST of CsGy2G012390 vs. NCBI nr
Match: KAG7010922.1 (hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282 bits (722), Expect = 4.86e-93
Identity = 164/232 (70.69%), Postives = 186/232 (80.17%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+VI+RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEF++NSEKN QK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKN-QKT 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180
            R EI    K ID+SR   +      +    E + Y+RS+SE++ VV RE   RE++RSE
Sbjct: 121 RRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSE 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           TEKCKK+V L E  +NR   ED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 TEKCKKIVRLSEETKNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 231

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BLAST of CsGy2G012390 vs. ExPASy TrEMBL
Match: A0A0A0LIS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 3.79e-147
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180
           PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC
Sbjct: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180

Query: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF
Sbjct: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]

BLAST of CsGy2G012390 vs. ExPASy TrEMBL
Match: A0A5D3DZ88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00270 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 7.51e-130
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEKNNQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREM-QRS 180
           PRTEI    KHIDESR KAS+SVEK+VNNP+ET+RY+R KSE+MEVV REKVDRE+ QRS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           ETEKCKKMVELKEGRRN SY ED MSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of CsGy2G012390 vs. ExPASy TrEMBL
Match: A0A1S3CDN2 (uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 7.51e-130
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEKNNQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREM-QRS 180
           PRTEI    KHIDESR KAS+SVEK+VNNP+ET+RY+R KSE+MEVV REKVDRE+ QRS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           ETEKCKKMVELKEGRRN SY ED MSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of CsGy2G012390 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 2.32e-95
Identity = 167/228 (73.25%), Postives = 190/228 (83.33%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KNS EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYE+FIKNSEKN QK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKN-QKT 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180
              EI    K ID     AS++ +K+VN P+E + Y RS+SE++ V  +E   RE++RSE
Sbjct: 121 RHAEIEYRTKQIDGDG-DASVAAKKVVN-PEEIKLYRRSQSEKIAVAQQENPQRELRRSE 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEE 224
           TEKCKK+V   EG    SY ED MSNEEFRQTVEAFIARQQRL+REEE
Sbjct: 181 TEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEE 225

[Close]

BLAST of CsGy2G012390 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.18e-91
Identity = 168/238 (70.59%), Postives = 191/238 (80.25%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+V++RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEF++NSEKN QK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKN-QKT 120

Query: 121 PRTEI----KHIDESRRKA------SISVEKIVNNPKETRRYERSKSERMEVVPREKVDR 180
            R EI    K ID+SR         SI+++KI     E + Y+RS+SE++ VV RE   R
Sbjct: 121 RRAEIEYRVKQIDDSRGNGNGNSDTSIAIKKIG----EIKHYQRSESEKIGVVQRENPHR 180

Query: 181 EMQRSETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228
           E++RSETEK KK+V L E  RNRS  ED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 ELRRSETEKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 233

[Close]

BLAST of CsGy2G012390 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 84/230 (36.52%), Postives = 137/230 (59.57%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+ + F  ++ EK+  IL ++  R   +LFR  EL L++I+IS+ S     ++K S + F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLSF---PSVKISGDIF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK-DPSKKSLVA---DLYEEFIKNSEKN 120
           +  +V L+SPRFVF IGNAIVITL AKSG++S+  +PSK +  A   DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKK 120

Query: 121 NQKSPRTEIKHIDESRRKASISVEKIVNNP--KETRRYERSKSERMEVVPREKVDREMQR 180
                 T+ + + +      +S  +  ++   +  +  E +  E+   + R   ++ M+ 
Sbjct: 121 KPVVYATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNGEKN--MKRYVSEKHMRV 180

Query: 181 SETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEE 225
            +++K K +V +K+        EDGMSNE+FR  +EAFIARQ+R+Q++EE
Sbjct: 181 CDSDK-KVVVRVKKP-------EDGMSNEQFRTKIEAFIARQKRIQKDEE 217

[Close]

BLAST of CsGy2G012390 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 7.7e-20
Identity = 73/247 (29.55%), Postives = 133/247 (53.85%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+S +F +++ EKA A+ ++ +F +I   FR  E+C+ L+ I    S LP  ++ S  + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R ++  + +P FVFL+GN+IV+ L  KS   +    +  S   ++Y+ F+++ E  ++ S
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTT--TAVASAETEIYQAFVRSVENRSKPS 120

Query: 121 PRTEIKHIDESRRKASIS----------------VEKIVNNPKETRRYERSKSE----RM 180
                + I    ++  ++                VE   ++   ++ Y RSKS+    + 
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGKQS 180

Query: 181 EVVPREKVDREMQRSETEK-CKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRL 227
             +    + R +QRSETEK CK+     +    ++Y ED +SNEEF++T+EAFIA+Q+  
Sbjct: 181 SNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMF 240

[Close]

BLAST of CsGy2G012390 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 8.8e-08
Identity = 65/275 (23.64%), Postives = 132/275 (48.00%), Query Frame = 0


Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLF-RFIELCLILIVISRFSSHLPTALKNSTEY 60
           M+S++    +  K   ++K  + + + +LF R IE+ L++I +++    L   +++S   
Sbjct: 1   MDSLSTQKAKPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-- 60

Query: 61  FRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQ- 120
              L+  LI+    F++GN IVIT+  K G F+ ++   +    D Y+EF++ S +  + 
Sbjct: 61  ---LASFLINRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERR 120

Query: 121 -------KSPRTEI-----KHIDESRRKASISVEK--------IVNNPKETRRYERSKSE 180
                  +  ++E+     + I+E+R K SI  ++          N  K++   +R K +
Sbjct: 121 LHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLK 180

Query: 181 RMEVVPREKVDREMQRSE--TEKCKKMV------ELKEGRRNRSYLEDG----------- 225
           + E+  R+    E ++ +   +K +++V       +K   R+RS   +G           
Sbjct: 181 KSEISGRQSSGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSCVQLKR 240

[Close]

BLAST of CsGy2G012390 vs. TAIR 10
Match: AT4G39190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 7.4e-07
Identity = 66/250 (26.40%), Postives = 107/250 (42.80%), Query Frame = 0


Query: 30  FRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSG 89
           FR IE+ ++L+ +++ S  L    ++S+      SV L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 90  QFSAKDPSKKSLVADLYEEFI---------------------------KNSEKNNQKSPR 149
               ++   K    DLYE+F+                           K S   N+    
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKEN 151

Query: 150 TEIKHIDESRRKASIS-----------------VEKIVNNPKETRRYERSKSERMEV--- 209
            E + I ESR K S++                  EK+        R ++S+ E  ++   
Sbjct: 152 EEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMT 211

Query: 210 -----VPREKVDREMQRSETEKCKKMVELKEGRRNRSYLEDGM----SNEEFRQTVEAFI 224
                +  ++  +  QRS++E  K + +   GR  RS  +       S++E R  +E+FI
Sbjct: 212 IEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGRLKRSETDASAERFDSDDELRYKIESFI 271

The following BLAST results are available for this feature:

BLAST of CsGy2G012390 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G012390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649236.1	7.83e-147	100.00	uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hypothetical ...	[more]
XP_008460958.1	1.55e-129	90.56	PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 unc...	[more]
XP_038900483.1	7.12e-109	80.60	uncharacterized protein LOC120087694 [Benincasa hispida]	[more]
XP_022146107.1	4.79e-95	73.25	uncharacterized protein LOC111015401 [Momordica charantia]	[more]
KAG7010922.1	4.86e-93	70.69	hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsGy2G012390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIS8	3.79e-147	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1	[more]
A0A5D3DZ88	7.51e-130	90.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CDN2	7.51e-130	90.56	uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=...	[more]
A0A6J1CYN5	2.32e-95	73.25	uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1JGH7	1.18e-91	70.59	uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy2G012390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34560.1	1.1e-23	36.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66440.1	7.7e-20	29.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G21560.1	8.8e-08	23.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G39190.1	7.4e-07	26.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 202..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..177
None	No IPR available	PANTHER	PTHR33640:SF8	TRANSMEMBRANE PROTEIN	coord: 1..226
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G012390.1	CsGy2G012390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane