CsGy2G012180 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G012180
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 12156383 .. 12160377 (-)
RNA-Seq ExpressionCsGy2G012180
SyntenyCsGy2G012180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCCCTACCAAAAGAAAAAACATTTGATGATAAAGACAAGGGAAACAAAGAACAACTCTTTACATACAAACCCCAAAACCCTCTTTTCATTTTGAACAACAATTGATGTTAAGGGCAAAAAACTCCATGTGATTGAAGGAAAGGTAAAGCAGAGACCATGAGAAAGTTTCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGTTTTAGGTTTTCTTTCTTTCAAATGGGTCTGGAAGAAACTGTAGAAGATAAGCAAAAGCACGCCAAGAAAGAAAGAAGATGAAAAACAAAACAAAACCCATCTCAGTTTTTGAGGTCAGCTTCTTAATTCGTTCAGATATCTTCCAGATTACTCTTTTCTGTTTTATTCTCCTCCTTAGTATGTTTTTATGGGCCCAAATTCAGAGCAGAATCAATGGAATTGTACAAAAAATTTCACGTGTGTGCTTCTGCTGCAAAACCCCTCCATTTTCTTTTCTTTTTTTGTTTTTCATCTTTGAAAAAAATTTCCCTCTTCCCCATATTGCTTTAAATAGTTATCTGGCATATGAAATCCCTTTGTGTTCTTCTTGCACTGCAGGTGTATCTTTGATGTGTCCTCTATCCTGAACAACGTTCCAAGCAAAGCTAGCTGGCGAAACGAATCCGTACAATGATTGACTTGTGTTCCTTTTTTTTTTTTTTTCTTATGGAGAAATGCTTGGTTCCCATTTCCTCTTTGTTGGTATTTTCTTAGCCATTGATTTCTTAGTAAGTAAACTCGTGTTTTTTTCCTGCTTTTCTTGGTTGGATTTGATATGTTGTTTACATCATTGTTCTAGAGATTTGAACCTTAATTCTTTTAGTGAATATGCTTGGCTGTATTGAATTGAAACATAAAGCTTAGGAGTGTAAAGTCCTAGCATGTTAGAGCCATAATATTTATCCCAGTTCACCTTGATATCCTTTAAACAATAAAGTGATTGTTAATATCGATTGCTTGTTCAACCTTGTAAATTACGTAATTGTGGGATGCTTTTCTGGATTTTCCTTCCAAGCTATGGAAAATGTCAAGATCAAGTCATACATACTGTAGTAATGGTACGTGTATTTGTAATGATGTTTAGTTTGGCATGTCTATAAACGAGACTAAAGGACTAGTAACAAACGGATGGAAGTTTAGTGTATTGGTTGGTTACGCCAGGGATTGTATTAGTTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGTTTGTTTTGTTTTGTAGTGACTGTTTCGGAATGTTGTTATTGCAATCACAAGGATTGGCTCGAATTCTTTGCCTACTTACTGCTTCATGTAAGTTTATAATGGTCCACAGCTATGAGTTCCCTTGCTATATTTGGTTATTCTTATGTGAATTAAAAGTGACATAATTTACTGGTCTCCAGCTAGAAGATATTGTTGAGCTTTGGCTGGCCCATTTTATATGACTCATACTTCAATTTTCAAAATATTGATAATCATATTCCAACTGATATAATGATATTCTTTTCAACTTAAATATGATATAGAATCTTTGTTGTCCTAGATGCAAAGAATTGAGATGGCCCAACTGGGTTTTTTTGTCTGCTCTTACTTTTCTTTTGTCATAAAAGATACTTGATCAGGGGACCTCATTTTGTTTCTAATCGATATGATATAGCATTGACAAAGTTGTTGTCTTGGGATCTTTATCAGCAGAAATCCTTTTTTTCCATTTCTCTTTGTGATACTGTCTAAATACTTCGAATGTAATAAGATCAATCAATTTATCTTGCTTAAGTATTGATTGTTGAAGATCTACACCATCTACTTACAATGTCTTAGATGTCGACATAATGAGAGTGATTATTTGGGCATTTAGGAATAGAGCTTGCTAACTTCTGCCCTTTTAGGATCCACGTAGCAACTCATTTCAAACACGTTCTAAGAAAGCATCTTGCAACACAATTAGGTAGATAAAACAGTCCAGGTTTTGGGAATAAAATAACGCTATAATAAATCATCTATGACACCCCTCCTTTATGCCTCAACTTAGGTAGAGAAGCCCAAATGTAAGCCATCCATCGTGGATTAATATCTCGAAGCAGGGTTGTGATGGTGTTGTCTATTTTCTACTTGCACTGTCCAAACAAGTAATTTCATTATATTTGGTTGGTAAAAAAGATATTGAGGCTGGCAAATGAAACTTCAGCTGTTGGGATTAATGATGGTGTTTTACAGTTGTTAAGCCAAATAGATAGATTAAGGTTGCAGTTTGAAAATGTGGGAAGACAGATGAATTGGCATTATTGGAACGGTCAATACACGTAAGAAATCAGTTAAAATCAATAGTTCCCTCCAAAAGTAATCTTGGTTTCAATAATTGAGTGGTTTTGCTCAGATGCATGGTTTCTATGTTGATAGTTTCACAATATCTCTTGTGATCATAAACCTCTGTTATACGTTACACCTTTTGTCATTGGACCATTTTGACTTTGGTGAAAACAGCTAGCAAATGAAAATTAATGTAGTAGCCCCAACATCATTAAGTTGCACGAGTCTTAGTCGATGCGATGCTGGCTCCGACCTGGTGACCACAGATGAAAAAACTTTGAACTGATCACTGCTTGATTATTACTTCCCTCACACAGAATGGAATCAAGTTGAGAATGATGTGTGCACTTAGATACACCCTCTGTTGACGTTAAGAATCCTTATCAAGGATCGTCCTACTCCTACCCTTTTTCACATGAAAGTAATACCAGTATCGATTCCTCCTCTCTTGTGGGACTGTTCTGTTACACAATGGTTCTCTTCTTATAAGCCATAGAAAGATTCAATCGTGTTTGATTGTTCCATGAGTAGATGTGAATATGCATTTTTTGTGTAGTTTCTAAAGGCTGAGGGAAAGGATGCCAATTCAATCGTTAAGAAGCAATTATGGCTTTCGTATTCACTGCAGCCTTGCAGGTTGGAAGAAACCGACAAGAATCTTGAATTTTATGGAGAGGAGAAGAATCTCACCATTCCAGCCTAGTTGAATGGTCCAAAGACGGCTGCAAAAGAATAAAGATAGCTTATTATATGGAATCGTTGGAGCCAGTGAGCTTTGAATTTTGAGTTTGCTGTTTTGTTCTCCTCCAAGTTTTGTATACTAGTGAAAGTTAAAGAATTAGAAAAATCATGTGCTTGTGGAATATCTAGAGGGAAAGTTTTGCTTGTATCATTAAGTTTGAGAGTGATCGTGTTGAACTTATTGACAGTGTTCAAGGACTGCATAGACCGTTTGGGAACGTCATAATGTTCTTTGATACAATCCTGTTATGTTGCTTATTGTTTACGTATGAATAGCATCGAGAAGATACACAAAAGCTCACCGAACTCTCGTGTGTGTGACACAAAGATTCTCCTCTGTTTAATATCTGTGATCATTGTGTTGAGATAATGTCAAAACCTTTCATTCATTTCCTTTGTGATAAAGCAAGCATTCTATCATATTTTGGTTGGCAAATTCTCATCTGATTAAGGCTTCTGCATATTGAAAATATTGAAAGTATTATATATGAAGTTTTTTGCACCATCTGAAAAGTTATGAGTTGTTATCTATGTTCTTCCTTTGCTTTGATCAACTGCGACTAAAACTTGCAAAACAAAACTGATCTCTTATTGTTCATTGGGGTGCGACAAATTCTCAGCTTCTCTTTTCTTCATCCCAACGAATGAACCGACGAAGTAACGAATCAAGTTGACCATTTTTTGTTCCAGTCCTTTTCCCATTTGCTACTTTTCTTGTTATGTCATAGCTCAAAATATGTATAAATCTCTTAATCTTTTATTGATTACTTGATATCTAATGTAATTGTCACATGGTTGTTCTTTAGTCCTTCCAATTTACATCAAAAGGAGAAAATTAGGGTTAAAAGAACACTTATAGTTGTGGTTTTTCTTCATTGTTAATGGATAGAAC

mRNA sequence

ATTTTCCCTACCAAAAGAAAAAACATTTGATGATAAAGACAAGGGAAACAAAGAACAACTCTTTACATACAAACCCCAAAACCCTCTTTTCATTTTGAACAACAATTGATGTTAAGGGCAAAAAACTCCATGTGATTGAAGGAAAGGTAAAGCAGAGACCATGAGAAAGTTTCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGTTTTAGGTTTTCTTTCTTTCAAATGGGTCTGGAAGAAACTGTAGAAGATAAGCAAAAGCACGCCAAGAAAGAAAGAAGATGAAAAACAAAACAAAACCCATCTCAGTTTTTGAGGTGTATCTTTGATGTGTCCTCTATCCTGAACAACGTTCCAAGCAAAGCTAGCTGGCGAAACGAATCCGTACAATGATTGACTTGTGTTCCTTTTTTTTTTTTTTTCTTATGGAGAAATGCTTGGTTCCCATTTCCTCTTTGTTGGTATTTTCTTAGCCATTGATTTCTTAGTAAGTAAACTCGTGTTTTTTTCCTGCTTTTCTTGGTTGGATTTGATATGTTGTTTACATCATTGTTCTAGAGATTTGAACCTTAATTCTTTTAGTGAATATGCTTGGCTGTATTGAATTGAAACATAAAGCTTAGGAGTGTAAAGTCCTAGCATGTTAGAGCCATAATATTTATCCCAGTTCACCTTGATATCCTTTAAACAATAAAGTGATTGTTAATATCGATTGCTTGTTCAACCTTGTAAATTACGTAATTGTGGGATGCTTTTCTGGATTTTCCTTCCAAGCTATGGAAAATGTCAAGATCAAGTCATACATACTGTAGTAATGGTACGTGTATTTGTAATGATGTTTAGTTTGGCATGTCTATAAACGAGACTAAAGGACTAGTAACAAACGGATGGAAGTTTAGTGTATTGGTTGGTTACGCCAGGGATTGTATTAGTTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGTTTGTTTTGTTTTGTAGTGACTGTTTCGGAATGTTGTTATTGCAATCACAAGGATTGGCTCGAATTCTTTGCCTACTTACTGCTTCATCCTTGCAGGTTGGAAGAAACCGACAAGAATCTTGAATTTTATGGAGAGGAGAAGAATCTCACCATTCCAGCCTAGTTGAATGGTCCAAAGACGGCTGCAAAAGAATAAAGATAGCTTATTATATGGAATCGTTGGAGCCAGTGAGCTTTGAATTTTGAGTTTGCTGTTTTGTTCTCCTCCAAGTTTTGTATACTAGTGAAAGTTAAAGAATTAGAAAAATCATGTGCTTGTGGAATATCTAGAGGGAAAGTTTTGCTTGTATCATTAAGTTTGAGAGTGATCGTGTTGAACTTATTGACAGTGTTCAAGGACTGCATAGACCGTTTGGGAACGTCATAATGTTCTTTGATACAATCCTGTTATGTTGCTTATTGTTTACGTATGAATAGCATCGAGAAGATACACAAAAGCTCACCGAACTCTCGTGTGTGTGACACAAAGATTCTCCTCTGTTTAATATCTGTGATCATTGTGTTGAGATAATGTCAAAACCTTTCATTCATTTCCTTTGTGATAAAGCAAGCATTCTATCATATTTTGGTTGGCAAATTCTCATCTGATTAAGGCTTCTGCATATTGAAAATATTGAAAGTATTATATATGAAGTTTTTTGCACCATCTGAAAAGTTATGAGTTGTTATCTATGTTCTTCCTTTGCTTTGATCAACTGCGACTAAAACTTGCAAAACAAAACTGATCTCTTATTGTTCATTGGGGTGCGACAAATTCTCAGCTTCTCTTTTCTTCATCCCAACGAATGAACCGACGAAGTAACGAATCAAGTTGACCATTTTTTGTTCCAGTCCTTTTCCCATTTGCTACTTTTCTTGTTATGTCATAGCTCAAAATATGTATAAATCTCTTAATCTTTTATTGATTACTTGATATCTAATGTAATTGTCACATGGTTGTTCTTTAGTCCTTCCAATTTACATCAAAAGGAGAAAATTAGGGTTAAAAGAACACTTATAGTTGTGGTTTTTCTTCATTGTTAATGGATAGAAC

Coding sequence (CDS)

ATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGTTTGTTTTGTTTTGTAGTGACTGTTTCGGAATGTTGTTATTGCAATCACAAGGATTGGCTCGAATTCTTTGCCTACTTACTGCTTCATCCTTGCAGGTTGGAAGAAACCGACAAGAATCTTGAATTTTATGGAGAGGAGAAGAATCTCACCATTCCAGCCTAG

Protein sequence

MKYFLVSSISLMTCLFCFVVTVSECCYCNHKDWLEFFAYLLLHPCRLEETDKNLEFYGEEKNLTIPA*
Homology
[Close]
BLAST of CsGy2G012180 vs. NCBI nr
Match: XP_008460937.1 (PREDICTED: uncharacterized protein LOC103499672 isoform X2 [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 8.22e-22
Identity = 45/78 (57.69%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 14 CLFCFVVTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEE 67
          C  C  VTVSECCY +HKDWLEFFAYLLLH                        PCRLEE
Sbjct: 2  CSSCTAVTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEE 61

[Close]
BLAST of CsGy2G012180 vs. NCBI nr
Match: KAA0045537.1 (uncharacterized protein E6C27_scaffold243G00270 [Cucumis melo var. makuwa] >TYK28854.1 uncharacterized protein E5676_scaffold303G00640 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 3.80e-20
Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 20 VTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEETDKNLE 67
          +TVSECCY +HKDWLEFFAYLLLH                        PCRLEET+KNLE
Sbjct: 20 MTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEETNKNLE 79

[Close]
BLAST of CsGy2G012180 vs. NCBI nr
Match: XP_008460936.1 (PREDICTED: uncharacterized protein LOC103499672 isoform X1 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 3.80e-20
Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 20 VTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEETDKNLE 67
          +TVSECCY +HKDWLEFFAYLLLH                        PCRLEET+KNLE
Sbjct: 20 LTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEETNKNLE 79

[Close]
BLAST of CsGy2G012180 vs. NCBI nr
Match: KGN61838.2 (hypothetical protein Csa_006127 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 1.09e-09
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 20 VTVSECCYCNHKDWLEFFAYLLLH 43
          +TVSECCYCNHKDWLEFFAYLLLH
Sbjct: 1  MTVSECCYCNHKDWLEFFAYLLLH 24

[Close]
BLAST of CsGy2G012180 vs. NCBI nr
Match: KAG7010931.1 (hypothetical protein SDJN02_27729 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 47.8 bits (112), Expect = 4.31e-05
Identity = 19/26 (73.08%), Postives = 21/26 (80.77%), Query Frame = 0 

Query: 42 LHPCRLEETDKNLEFYGEEKNLTIPA 67
          L PCRLEETD+NL+ YGEEKN T P 
Sbjct: 16 LQPCRLEETDENLQLYGEEKNHTAPV 41

[Close]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match: A0A1S3CD32 (uncharacterized protein LOC103499672 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499672 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.98e-22
Identity = 45/78 (57.69%), Postives = 48/78 (61.54%), Query Frame = 0 

Query: 14 CLFCFVVTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEE 67
          C  C  VTVSECCY +HKDWLEFFAYLLLH                        PCRLEE
Sbjct: 2  CSSCTAVTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEE 61

[Close]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match: A0A5A7TUN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00640 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.84e-20
Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 20 VTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEETDKNLE 67
          +TVSECCY +HKDWLEFFAYLLLH                        PCRLEET+KNLE
Sbjct: 20 MTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEETNKNLE 79

[Close]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match: A0A1S3CES9 (uncharacterized protein LOC103499672 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499672 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.84e-20
Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 20 VTVSECCYCNHKDWLEFFAYLLLH------------------------PCRLEETDKNLE 67
          +TVSECCY +HKDWLEFFAYLLLH                        PCRLEET+KNLE
Sbjct: 20 LTVSECCYLDHKDWLEFFAYLLLHFLKADGKDANSIVKKHLWLSYSLQPCRLEETNKNLE 79

[Close]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match: A0A0A0LIZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247050 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.71e-11
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 16 FCFVVTVSECCYCNHKDWLEFFAYLLLH 43
          +C  VTVSECCYCNHKDWLEFFAYLLLH
Sbjct: 8  YCSNVTVSECCYCNHKDWLEFFAYLLLH 35

The following BLAST results are available for this feature:
BLAST of CsGy2G012180 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G012180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460937.18.22e-2257.69PREDICTED: uncharacterized protein LOC103499672 isoform X2 [Cucumis melo][more]
KAA0045537.13.80e-2058.33uncharacterized protein E6C27_scaffold243G00270 [Cucumis melo var. makuwa] >TYK2... [more]
XP_008460936.13.80e-2058.33PREDICTED: uncharacterized protein LOC103499672 isoform X1 [Cucumis melo][more]
KGN61838.21.09e-0995.83hypothetical protein Csa_006127 [Cucumis sativus][more]
KAG7010931.14.31e-0573.08hypothetical protein SDJN02_27729 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CD323.98e-2257.69uncharacterized protein LOC103499672 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TUN81.84e-2058.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CES91.84e-2058.33uncharacterized protein LOC103499672 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LIZ25.71e-1189.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G247050 PE=4 SV=1[more]
BLAST of CsGy2G012180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G012180.2CsGy2G012180.2mRNA