CsGy2G011800 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G011800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	CSL zinc finger domain-containing protein
Location	Gy14Chr2: 11771614 .. 11773942 (-)
RNA-Seq Expression	CsGy2G011800
Synteny	CsGy2G011800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCCGATGAGGATAATGATCGTGGCTTTGGTTGTGACGCTGTTGCTTTTGGTTGTGGAAGGAATCGATACGAACGATGTGTATAGTCCATGTTTAGATTCAAAGATTCAGAGATCTGATGGATTTACATTTGGTGTAGCGTTTTCTTCTAAAGAATCATTCTTCCAGGATCAGATTCAATTTTCTCCTTGTGATACTCGTCTGTCTTTGGCTTCTAAAATGGCTCAGCTCGTCGTGTTTAGACCTAAGGTCGACCAACTCTCGTTTCTCACCATTAATTCCTCCACCTTCAATCCGGTATGTGTACCATCGTATCTTCTTTCTTCTATCCTCTTCATTATTATTATCTATTATTGTTATCTCATGCTTTATTCATCCATTCGGAAATGGTTTTTGTTTTTCTTCCCAACAACATCCCAATGGGAATATATATATATTATTTGGGAATATTTGGTTTCAAAATATTATATATTTGGAACTTAGAAAGTTTTATTTGGTTATAATTTTACTTTCTAACTAATTAAATATAATTAACATGTCAAAATGTATATTAGCATTCACATTATCACTCTAGCAAGCATTACGTTAACTAAAATTTAAATCAACAACCATTTAAAGGTATTTTGACAAGTGAGGAACTAAAATATATGATGACCAAATAAATATCAACTCCAAATATATGGGTCAAAAAGTGTATTTTATCTAAGGTTTAAACTAATAATTGAAAACTACAAATATAAATGGGTTGAATAGGAAGATTTTTTGGACCAATCCGAATTTTCGAGTTAGTCAAATTGACCACCCAAAAAAATTATAAAACTTAAATGAAATACAAATATTAAATATCAAAGCTCAATTATTACCTGCTTAAAAAGAAAAGCTTAATAGTAATAATAATATGTATGAATTATAATATTTATAAGTTGTAGTATGTGTTTTAATAACATTAGAAATTCAGGTTGGATTGGGTCAACTCAAATTTTAAAACATGTAACCTGAATTCGAACTCAATCCTTACAATTTGTGATTGGATAGTTCAAGTTATCGGTTATTTGAAGACTCCTATAGAAAAATATAAATTTTTGTAAGTGATTCAATTTATACTCTCTTGTTTTTATTCGGACCAATACGATATCAGATTAAGTCAACAAGTAAATCAACTCAAACAATCCATTGGAATTAGCTTTGAAAATAATCACTCTATTAATTCTGAAAGACAATCTCTGCCAGAATGAATTATTAAAATAAATGCATGAATAATGGTGAGAACAAATTGGGACTAAAAATGAAAATGTGGATAAGTTAGATTGATATTTTGGTTACAAAAATAAAATAATTTAAGTTGATGGTTTTGTAGTTACAATTAATGGGCTAGAAACCTCACAATTATCCATCACCCTTTAATGCAGTGCACTAATAAGTCAATCCATGATAAATAGAATAGAAATTAGAATGGATGACAACTCATTCAACTAGAGTATTTTTACCAAATTAGAAACAAGATTCCAACCAATACTAATTAACTTCCCATAAAGTGTTACCCTTCCAAATATGCCTACTGAGTACTGAGCAGTTGGAAGCATTTGTAAATCTACCACAAATTAGGGAAATTTTTACCCATATCATACACTTTAAACAATTTCTTTTGCATTGGTCAAACCTTGGGTAGGTCACTAACTTTTCAAATGCTGAAATAGTGAATGAAGGAAGATTTTGGTAGATGATTTTACTACATGAGGTTATATGATTTATTAGGAATCAAGATTAGGACATAATAATAATTTTGGTGTTTTCAGGCTTTGAATGGTGGGTATATGGTAGCATTTGCTGGGCAAAAGTATGCAGCAAGATCTCTCCCAGTAATGATCACTGATAATTCTAATACCATAACTAGTTTCACTTTGGTAAGCTCGTAAACTATGTTCAAGTAAAAGGAAAAGGAAAAGGAAAATCATCATGGTACTGATAACAAAATTGTTGTTTGTTCCAGGTTCTTGAATTTCAAAGGGGAATTCTTCAAAACCTGTTTTGGAAGAAATTTGGATGTGACAAATGCAGTGGGGATTTCTCATTATGCGTGGACAACCAAGACTGTGCAATTCCAAACTCCAAATGTAAGTACAATGGTGGTTCTGTTGATTGCAATTTAGGCATACAACTTGCATTTTCAGGGACAGATAAGAACCTGGAAGTCCTCAACTCCTGGTATGAAGTCGACAATCTCAGACGTTTCTCCCTCTACCAGCTTTTCTCTGATGTTCGTGATACGGTCACCAACCCATTCGGTTAAAAATCTTTTGCATCTTCAGCTCTGTAGGCAAGGAAC

mRNA sequence

ATGCGGCCGATGAGGATAATGATCGTGGCTTTGGTTGTGACGCTGTTGCTTTTGGTTGTGGAAGGAATCGATACGAACGATGTGTATAGTCCATGTTTAGATTCAAAGATTCAGAGATCTGATGGATTTACATTTGGTGTAGCGTTTTCTTCTAAAGAATCATTCTTCCAGGATCAGATTCAATTTTCTCCTTGTGATACTCGTCTGTCTTTGGCTTCTAAAATGGCTCAGCTCGTCGTGTTTAGACCTAAGGTCGACCAACTCTCGTTTCTCACCATTAATTCCTCCACCTTCAATCCGGCTTTGAATGGTGGGTATATGGTAGCATTTGCTGGGCAAAAGTATGCAGCAAGATCTCTCCCAGTAATGATCACTGATAATTCTAATACCATAACTAGTTTCACTTTGGTTCTTGAATTTCAAAGGGGAATTCTTCAAAACCTGTTTTGGAAGAAATTTGGATGTGACAAATGCAGTGGGGATTTCTCATTATGCGTGGACAACCAAGACTGTGCAATTCCAAACTCCAAATGTAAGTACAATGGTGGTTCTGTTGATTGCAATTTAGGCATACAACTTGCATTTTCAGGGACAGATAAGAACCTGGAAGTCCTCAACTCCTGGTATGAAGTCGACAATCTCAGACGTTTCTCCCTCTACCAGCTTTTCTCTGATGTTCGTGATACGGTCACCAACCCATTCGGTTAAAAATCTTTTGCATCTTCAGCTCTGTAGGCAAGGAAC

Coding sequence (CDS)

ATGCGGCCGATGAGGATAATGATCGTGGCTTTGGTTGTGACGCTGTTGCTTTTGGTTGTGGAAGGAATCGATACGAACGATGTGTATAGTCCATGTTTAGATTCAAAGATTCAGAGATCTGATGGATTTACATTTGGTGTAGCGTTTTCTTCTAAAGAATCATTCTTCCAGGATCAGATTCAATTTTCTCCTTGTGATACTCGTCTGTCTTTGGCTTCTAAAATGGCTCAGCTCGTCGTGTTTAGACCTAAGGTCGACCAACTCTCGTTTCTCACCATTAATTCCTCCACCTTCAATCCGGCTTTGAATGGTGGGTATATGGTAGCATTTGCTGGGCAAAAGTATGCAGCAAGATCTCTCCCAGTAATGATCACTGATAATTCTAATACCATAACTAGTTTCACTTTGGTTCTTGAATTTCAAAGGGGAATTCTTCAAAACCTGTTTTGGAAGAAATTTGGATGTGACAAATGCAGTGGGGATTTCTCATTATGCGTGGACAACCAAGACTGTGCAATTCCAAACTCCAAATGTAAGTACAATGGTGGTTCTGTTGATTGCAATTTAGGCATACAACTTGCATTTTCAGGGACAGATAAGAACCTGGAAGTCCTCAACTCCTGGTATGAAGTCGACAATCTCAGACGTTTCTCCCTCTACCAGCTTTTCTCTGATGTTCGTGATACGGTCACCAACCCATTCGGTTAA

Protein sequence

MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG*

Homology

[Close]

BLAST of CsGy2G011800 vs. NCBI nr
Match: XP_011649210.1 (uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736519.1 uncharacterized protein LOC101222204 [Cucumis sativus] >XP_031736520.1 uncharacterized protein LOC101222204 [Cucumis sativus] >KAE8651859.1 hypothetical protein Csa_006582 [Cucumis sativus])

HSP 1 Score: 474 bits (1219), Expect = 1.49e-168
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY
Sbjct: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of CsGy2G011800 vs. NCBI nr
Match: XP_008459230.1 (PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >XP_008459231.1 PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >KAA0045993.1 uncharacterized protein E6C27_scaffold243G005520 [Cucumis melo var. makuwa] >TYK13592.1 uncharacterized protein E5676_scaffold299G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 444 bits (1143), Expect = 5.77e-157
Identity = 218/235 (92.77%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M PMR+MIVALVVTLLLLV EGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCD RLSLASK AQL VFRPKVDQLSFLTI++STFNPALNGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PVM+TDNS+TITSFTLV EF+RG LQNLFWKKFGCDKCSGDFSLCVDNQDCAI +SKCKY
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           +GGSVDCNLGIQLAFSGTDKNLEVLNSWYE+DNLRRFSLYQLFSDVRDTVTNPFG
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of CsGy2G011800 vs. NCBI nr
Match: XP_038877911.1 (uncharacterized protein LOC120070122 [Benincasa hispida])

HSP 1 Score: 422 bits (1086), Expect = 2.92e-148
Identity = 207/236 (87.71%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLV-VEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQ 60
           M  MR+MIVAL+V LLLL+ VEGI+TND+YSPCLDSKIQRSDGFTFGVAFSSKESFFQDQ
Sbjct: 1   MDAMRMMIVALIVMLLLLLAVEGINTNDIYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQ 60

Query: 61  IQFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARS 120
           IQ SPCD+RL+LASK AQL VFRP+VDQLSFLTINSSTFNPA+NGGYMVAFAG+KYAARS
Sbjct: 61  IQLSPCDSRLALASKNAQLAVFRPEVDQLSFLTINSSTFNPAMNGGYMVAFAGKKYAARS 120

Query: 121 LPVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCK 180
           LPVMITDNS+TITSFTLV EFQ+G LQNL WKKFGCDKCSGDFS+C+DNQDCA+ +SKCK
Sbjct: 121 LPVMITDNSHTITSFTLVFEFQKGTLQNLLWKKFGCDKCSGDFSVCLDNQDCAVQSSKCK 180

Query: 181 YNGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           YNGGSVDCNL IQLAFSGTDKNLEVLNSWYEVDNLRRFSLY+LFSDVRDTVTNPFG
Sbjct: 181 YNGGSVDCNLSIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYKLFSDVRDTVTNPFG 236

[Close]

BLAST of CsGy2G011800 vs. NCBI nr
Match: XP_022148528.1 (uncharacterized protein LOC111017155 [Momordica charantia])

HSP 1 Score: 406 bits (1043), Expect = 1.29e-141
Identity = 195/242 (80.58%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M  MR   +AL   +L+LV EG DTNDV+SPCLD+K+QRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCD RL LASK AQLVVFRP+VDQLS LTINS+TFNPAL GGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PV+ITDNSNTITSFTLVLEFQ+G LQNLFWKKFGCDKC+GD+S+C+DNQDCA+PN+KCK+
Sbjct: 121 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTV-------TNP 235
           NGGS+DCNL IQLAFSGTD+NLEVLNSW+EVDNLRR+SLY+LFSDVRDT+       TNP
Sbjct: 181 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTITNP 240

[Close]

BLAST of CsGy2G011800 vs. NCBI nr
Match: XP_023513242.1 (uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760.1 uncharacterized protein LOC111785616 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401 bits (1031), Expect = 8.39e-140
Identity = 189/235 (80.43%), Postives = 217/235 (92.34%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M  MR + V LVVT+L+LV EGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 7   MGAMRTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 66

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCDTRL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 67  QFSPCDTRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 126

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PVMITDNS+TITSFTLV EFQ+G LQNLFWKK+GC+KC+GDFS+C+DNQDCA+ +SKCKY
Sbjct: 127 PVMITDNSHTITSFTLVFEFQKGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 186

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+E+DNL RFSL++LF+DVRDTVTNPFG
Sbjct: 187 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEIDNLMRFSLFKLFADVRDTVTNPFG 241

[Close]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL
Match: A0A1S3CA87 (uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 2.79e-157
Identity = 218/235 (92.77%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M PMR+MIVALVVTLLLLV EGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCD RLSLASK AQL VFRPKVDQLSFLTI++STFNPALNGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PVM+TDNS+TITSFTLV EF+RG LQNLFWKKFGCDKCSGDFSLCVDNQDCAI +SKCKY
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           +GGSVDCNLGIQLAFSGTDKNLEVLNSWYE+DNLRRFSLYQLFSDVRDTVTNPFG
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL
Match: A0A5D3CQC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00800 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 2.79e-157
Identity = 218/235 (92.77%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M PMR+MIVALVVTLLLLV EGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCD RLSLASK AQL VFRPKVDQLSFLTI++STFNPALNGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PVM+TDNS+TITSFTLV EF+RG LQNLFWKKFGCDKCSGDFSLCVDNQDCAI +SKCKY
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           +GGSVDCNLGIQLAFSGTDKNLEVLNSWYE+DNLRRFSLYQLFSDVRDTVTNPFG
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL
Match: A0A0A0LIV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237180 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 7.39e-154
Identity = 220/235 (93.62%), Postives = 220/235 (93.62%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PV               LEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY
Sbjct: 121 PV---------------LEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 220

[Close]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL
Match: A0A6J1D4C1 (uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017155 PE=4 SV=1)

HSP 1 Score: 406 bits (1043), Expect = 6.25e-142
Identity = 195/242 (80.58%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60
           M  MR   +AL   +L+LV EG DTNDV+SPCLD+K+QRSDGFTFGVAFSSKESFFQDQI
Sbjct: 1   MAAMRTATMALAAMMLILVAEGTDTNDVFSPCLDAKVQRSDGFTFGVAFSSKESFFQDQI 60

Query: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120
           QFSPCD RL LASK AQLVVFRP+VDQLS LTINS+TFNPAL GGYMVAFAGQKYAARSL
Sbjct: 61  QFSPCDRRLGLASKNAQLVVFRPRVDQLSLLTINSTTFNPALYGGYMVAFAGQKYAARSL 120

Query: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180
           PV+ITDNSNTITSFTLVLEFQ+G LQNLFWKKFGCDKC+GD+S+C+DNQDCA+PN+KCK+
Sbjct: 121 PVLITDNSNTITSFTLVLEFQKGTLQNLFWKKFGCDKCTGDYSVCLDNQDCAVPNTKCKF 180

Query: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTV-------TNP 235
           NGGS+DCNL IQLAFSGTD+NLEVLNSW+EVDNLRR+SLY+LFSDVRDT+       TNP
Sbjct: 181 NGGSIDCNLSIQLAFSGTDRNLEVLNSWFEVDNLRRYSLYKLFSDVRDTISDVHDTITNP 240

[Close]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL
Match: A0A6J1FVK1 (uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC111448855 PE=4 SV=1)

HSP 1 Score: 399 bits (1025), Expect = 3.33e-139
Identity = 187/227 (82.38%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 9   VALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDTR 68
           V LVVT+L+LV EGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQIQFSPCD+R
Sbjct: 15  VVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPCDSR 74

Query: 69  LSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNS 128
           L+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSLPVMITDNS
Sbjct: 75  LALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITDNS 134

Query: 129 NTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSVDCN 188
           +TITSFTLV EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDCA+ +SKCKY+GGSVDCN
Sbjct: 135 HTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSVDCN 194

Query: 189 LGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235
           + IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LF+DVRDTVTNPFG
Sbjct: 195 ISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 241

[Close]

BLAST of CsGy2G011800 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 288.9 bits (738), Expect = 3.7e-78
Identity = 138/238 (57.98%), Postives = 181/238 (76.05%), Query Frame = 0


Query: 6   IMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65
           IM++ ++V ++   V   D N VYSPC D++I + DGFT G+A SSKE+FF DQ+Q SPC
Sbjct: 126 IMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPC 185

Query: 66  DTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMIT 125
           DTRL LA+KMAQL +FRPKVD++S L+I++S FNP+  GG+MV FAG KYAARS PV + 
Sbjct: 186 DTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVA 245

Query: 126 DNSNTITSFT---------LVLEFQRGILQNLFWKKFGCDKCSG---DFSLCVDNQDCAI 185
           D SNTIT+FT         LVLEFQ+G+LQNLFWK FGCD C G     S+C++  DCA+
Sbjct: 246 DGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAV 305

Query: 186 PNSKCKYNGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVT 232
           P SKCK NGG  +CN+GIQ+AFSGTD+NLE LN+WYEV+NLR++SL  L+++  D+++
Sbjct: 306 PTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]

BLAST of CsGy2G011800 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 275.4 bits (703), Expect = 4.3e-74
Identity = 129/213 (60.56%), Postives = 172/213 (80.75%), Query Frame = 0


Query: 24  DTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQ-IQFSPCDTRLSLASKMAQLVVFR 83
           +TN +YSPC D++IQRSDGFTFG+AFSS+ SFF +Q +  SPCD RLSLA+  +Q  VFR
Sbjct: 30  NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query: 84  PKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNSNTITSFTLVLEFQR 143
           PK+D++S L+IN+S F P   GGYMVAFAG+KYAARS+P  I +++  +TSFTLV+EFQ+
Sbjct: 90  PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query: 144 GILQNLFWKKFGCDKCSGDFS-LCVDNQDCAIPNSKCKYNGGSVDCNLGIQLAFSGTDKN 203
           G LQNL+WK+ GC  C G+ + +C++ QDCAI    CK  GG+VDC+LGIQLAFSGTDK+
Sbjct: 150 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTDKH 209

Query: 204 LEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPF 235
           L VLNSWYEV+NL+++SLY L+S+++ ++TN F
Sbjct: 210 LAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQF 242

[Close]

BLAST of CsGy2G011800 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 268.5 bits (685), Expect = 5.2e-72
Identity = 127/224 (56.70%), Postives = 169/224 (75.45%), Query Frame = 0


Query: 19  VVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFF----QDQIQFSPCDTRLSLASK 78
           + E  D N VYSPC DS +   DGFTFG+AF++K+SFF       +Q+SPCD R    + 
Sbjct: 19  LTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNG 78

Query: 79  MAQLVVFRPKVDQLSFLTIN---SSTFNPALNGGYMVAFAGQKYAARSLPVMITDNSNTI 138
            +++ VFRPKVD+++ LTIN   SS+F P  + GYMVAFAG KYAARSLP+M+ D+++ +
Sbjct: 79  NSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIV 138

Query: 139 TSFTLVLEFQRGILQNLFWKKFGCDKCSGDFS-LCVDNQDCAIPNSKCKYNGGSVDCNLG 198
           TSFTLVLEFQ+G L+N+FWKK GC KCSGD   +C++ ++CAI    CK  GG VDC+LG
Sbjct: 139 TSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLG 198

Query: 199 IQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPF 235
           IQLAFSGTDK+   LNSWYEV NL+++SLY L+S+++D++TNPF
Sbjct: 199 IQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPF 242

[Close]

BLAST of CsGy2G011800 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 106 YMVAFAGQKYAARSLPVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDK 158
           Y V   G +  +   P  I +++  +TSFT V+EFQ+G LQNL+WK+  C K
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of CsGy2G011800 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G011800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649210.1	1.49e-168	100.00	uncharacterized protein LOC101222204 [Cucumis sativus] >XP_011649211.1 uncharact...	[more]
XP_008459230.1	5.77e-157	92.77	PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo] >XP_008459231.1 P...	[more]
XP_038877911.1	2.92e-148	87.71	uncharacterized protein LOC120070122 [Benincasa hispida]	[more]
XP_022148528.1	1.29e-141	80.58	uncharacterized protein LOC111017155 [Momordica charantia]	[more]
XP_023513242.1	8.39e-140	80.43	uncharacterized protein LOC111777756 [Cucurbita pepo subsp. pepo] >XP_023521760....	[more]

BLAST of CsGy2G011800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CA87	2.79e-157	92.77	uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=...	[more]
A0A5D3CQC8	2.79e-157	92.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LIV3	7.39e-154	93.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237180 PE=4 SV=1	[more]
A0A6J1D4C1	6.25e-142	80.58	uncharacterized protein LOC111017155 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FVK1	3.33e-139	82.38	uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of CsGy2G011800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15910.1	3.7e-78	57.98	CSL zinc finger domain-containing protein	[more]
AT3G44150.1	4.3e-74	60.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	5.2e-72	56.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48630.1	1.4e-05	42.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 3..234
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 3..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G011800.2	CsGy2G011800.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding