CsGy2G011010 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G011010
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Epidermal patterning factor-like protein
Location	Gy14Chr2: 10899158 .. 10899816 (+)
RNA-Seq Expression	CsGy2G011010
Synteny	CsGy2G011010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGGTAAGTTTCAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTATTCTCTCTCAAACCACCCATCTCTTAATTCCTCTATTTATCAACCCATTTCTCGGTTTGTTTTAACAAAAACAGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGAAATTTTAGCAAAACAAAATAAAATAACAATCCTTTTTTTTTTTCTTCTTCTTCTTCTTTGTCAAATATATTCTGCTGATCAATTGTTTTTGCCACTTGTAGTCACTTCAATGGGAG

mRNA sequence

ATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGAAATTTTAGCAAAACAAAATAAAATAACAATCCTTTTTTTTTTTCTTCTTCTTCTTCTTTGTCAAATATATTCTGCTGATCAATTGTTTTTGCCACTTGTAGTCACTTCAATGGGAG

Coding sequence (CDS)

ATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGA

Protein sequence

MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP*

Homology

[Close]

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-25
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 82  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.9e-24
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 49  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 108
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 109 CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-19
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 91  SSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           SSPP C++KC  C+PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHP--NKPQDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-07
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 91  SSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           SSPP C++KC  C+PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHP--NQPEDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of CsGy2G011010 vs. NCBI nr
Match: XP_004145393.2 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus] >KAE8651835.1 hypothetical protein Csa_006221 [Cucumis sativus])

HSP 1 Score: 286 bits (733), Expect = 1.28e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP 60
           MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP
Sbjct: 1   MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP 60

Query: 61  TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP 120
           TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP
Sbjct: 61  TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP 120

Query: 121 LEYYPEAWRCKCGNTLYMP 139
           LEYYPEAWRCKCGNTLYMP
Sbjct: 121 LEYYPEAWRCKCGNTLYMP 139

[Close]

BLAST of CsGy2G011010 vs. NCBI nr
Match: XP_008449315.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa] >TYK30149.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 1.23e-59
Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 34  LLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSP 93
           LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE KL P GT+E  LTRRRL+GPGSSP
Sbjct: 4   LLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAKL-PAGTRERVLTRRRLTGPGSSP 63

Query: 94  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 64  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CsGy2G011010 vs. NCBI nr
Match: XP_023513820.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156 bits (394), Expect = 2.64e-46
Identity = 79/107 (73.83%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 37  HHRRRTPLSLLL----LLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSS 96
           HHRRR   +L L    LLLL S+IAARPTPI +      LP G +E  +TRRRLSGPGSS
Sbjct: 12  HHRRRCLPTLFLFAVVLLLLASAIAARPTPIKETQ----LPTGGEERVVTRRRLSGPGSS 71

Query: 97  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 72  PPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 114

[Close]

BLAST of CsGy2G011010 vs. NCBI nr
Match: XP_023000566.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima])

HSP 1 Score: 155 bits (392), Expect = 5.15e-46
Identity = 78/106 (73.58%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 37  HHRRRTPLSLLL---LLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSP 96
           HHRRR   +L L   +LLL S+IAARPTPI +      LP G +E  +TRRRLSGPGSSP
Sbjct: 12  HHRRRRLPTLFLFAVVLLLASAIAARPTPIKETQ----LPTGGEERVVTRRRLSGPGSSP 71

Query: 97  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 72  PTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]

BLAST of CsGy2G011010 vs. NCBI nr
Match: XP_022930459.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata])

HSP 1 Score: 154 bits (389), Expect = 1.72e-45
Identity = 81/110 (73.64%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 37  HHRRRTP-------LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 96
           H RRR P       + LLLLLLL S+IAARPTPI    E +LL  G +E  +TRRRLSGP
Sbjct: 13  HRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIK---ETQLLT-GGEERVVTRRRLSGP 72

Query: 97  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           GSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 73  GSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 118

[Close]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL
Match: A0A0A0LKT0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222070 PE=3 SV=1)

HSP 1 Score: 226 bits (575), Expect = 2.96e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 30  MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 89
           MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP
Sbjct: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60

Query: 90  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 110

[Close]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL
Match: A0A5A7UQS2 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001330 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.95e-60
Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 34  LLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSP 93
           LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE KL P GT+E  LTRRRL+GPGSSP
Sbjct: 4   LLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAKL-PAGTRERVLTRRRLTGPGSSP 63

Query: 94  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 64  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL
Match: A0A1S3BMN7 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230 PE=3 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.95e-60
Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 34  LLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSP 93
           LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE KL P GT+E  LTRRRL+GPGSSP
Sbjct: 4   LLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAKL-PAGTRERVLTRRRLTGPGSSP 63

Query: 94  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 64  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL
Match: A0A6J1KG67 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494809 PE=3 SV=1)

HSP 1 Score: 155 bits (392), Expect = 2.49e-46
Identity = 78/106 (73.58%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 37  HHRRRTPLSLLL---LLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSP 96
           HHRRR   +L L   +LLL S+IAARPTPI +      LP G +E  +TRRRLSGPGSSP
Sbjct: 12  HHRRRRLPTLFLFAVVLLLASAIAARPTPIKETQ----LPTGGEERVVTRRRLSGPGSSP 71

Query: 97  PTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           PTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 72  PTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL
Match: A0A6J1ERG1 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436899 PE=3 SV=1)

HSP 1 Score: 154 bits (389), Expect = 8.33e-46
Identity = 81/110 (73.64%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 37  HHRRRTP-------LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 96
           H RRR P       + LLLLLLL S+IAARPTPI    E +LL  G +E  +TRRRLSGP
Sbjct: 13  HRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIK---ETQLLT-GGEERVVTRRRLSGP 72

Query: 97  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 139
           GSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 73  GSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 118

[Close]

BLAST of CsGy2G011010 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-26
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0


Query: 82  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CsGy2G011010 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 111.3 bits (277), Expect = 6.3e-25
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 49  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 108
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 109 CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CsGy2G011010 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of CsGy2G011010 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

The following BLAST results are available for this feature:

BLAST of CsGy2G011010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3I3	6.1e-25	79.31	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	8.9e-24	56.38	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	3.9e-19	70.18	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q7M1E7	2.6e-07	42.86	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q9FY19	3.4e-07	42.86	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of CsGy2G011010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145393.2	1.28e-97	100.00	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus] >KAE8651835.1 hypot...	[more]
XP_008449315.1	1.23e-59	88.68	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450...	[more]
XP_023513820.1	2.64e-46	73.83	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]	[more]
XP_023000566.1	5.15e-46	73.58	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]	[more]
XP_022930459.1	1.72e-45	73.64	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]	[more]

BLAST of CsGy2G011010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKT0	2.96e-74	100.00	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222...	[more]
A0A5A7UQS2	5.95e-60	88.68	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BMN7	5.95e-60	88.68	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230...	[more]
A0A6J1KG67	2.49e-46	73.58	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1ERG1	8.33e-46	73.64	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CsGy2G011010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14723.1	4.4e-26	79.31	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	6.3e-25	56.38	allergen-related	[more]
AT2G30370.1	2.7e-20	70.18	allergen-related	[more]
AT2G30370.2	2.7e-20	70.18	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 89..139 e-value: 7.6E-20 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..97
None	No IPR available	PANTHER	PTHR33109:SF55	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 64..139
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 64..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G011010.1	CsGy2G011010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane