CsGy2G010740 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G010740
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionEnvelope-like protein
LocationGy14Chr2: 10584335 .. 10584775 (+)
RNA-Seq ExpressionCsGy2G010740
SyntenyCsGy2G010740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGATATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATGTTGTCTTCACAAAAATCGTTGATTTCCCCTCCTTGTCTCCAATGGTGCCCATGTGCCGGATATTGAGCACATTGTTCGTTCCTCGCGCTTAGCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGCTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

mRNA sequence

ATGAAGGATATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGCTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

Coding sequence (CDS)

ATGAAGGATATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGCTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

Protein sequence

MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS*
Homology
BLAST of CsGy2G010740 vs. NCBI nr
Match: KGN61637.1 (hypothetical protein Csa_006223 [Cucumis sativus])

HSP 1 Score: 225 bits (573), Expect = 5.46e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 1   MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL 60
           MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL
Sbjct: 1   MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL 60

Query: 61  SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115
           SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 61  SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

BLAST of CsGy2G010740 vs. NCBI nr
Match: KAA0033955.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.88e-07
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0

Query: 31  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDHH 90
           +E  + PS  R +  FDSE V F+     L    A R+ N L  ESRA  TSI LL +  
Sbjct: 445 IEHDIRPS--RNARVFDSEDVNFATEGFNLLGELALRVINTLTAESRALSTSINLLFERR 504

Query: 91  VEINNLLRYLKSVLSAS 107
           +E++NL+R+LKS+LS++
Sbjct: 505 LEVDNLVRHLKSLLSST 519

BLAST of CsGy2G010740 vs. NCBI nr
Match: KAA0055458.1 (uncharacterized protein E6C27_scaffold221G00300 [Cucumis melo var. makuwa] >TYK08941.1 uncharacterized protein E5676_scaffold314G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 1.37e-06
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 30  IVERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDH 89
           ++E  M PS  R    FD++ V  SV    +    AFRI N L  ESR   TSI LLTD 
Sbjct: 31  VIEHDMRPS--RNPRIFDTDDVDKSVKGFFVHLDLAFRIINTLTAESRTLSTSINLLTDK 90

Query: 90  HVEINNLLRYLKSVLSASGDPGL 112
            +E+++L+++LK+++ +S    L
Sbjct: 91  KLEVDSLIQHLKTLILSSSTGAL 111

BLAST of CsGy2G010740 vs. NCBI nr
Match: TYK01556.1 (hypothetical protein E5676_scaffold451G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 52.0 bits (123), Expect = 6.21e-06
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 1  MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNF 40
          MK+ +EL+++SL  + K+A+ENPFSLIE I+ERKM PS F
Sbjct: 15 MKETRELIKYSLRGIGKLANENPFSLIEAIIERKMPPSFF 54

BLAST of CsGy2G010740 vs. NCBI nr
Match: KAA0033904.1 (uncharacterized protein E6C27_scaffold43059G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 52.8 bits (125), Expect = 8.27e-06
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0

Query: 31  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDHH 90
           +E  M  S  R S  FD E V FS+    L      R+ N L  ESRA  TSI LL+D  
Sbjct: 54  IEHDMRSS--RNSRVFDFEDVNFSLEGFNLPRELGSRVINTLTAESRALSTSINLLSDKR 113

Query: 91  VEINNLLRYLKSVLSAS 107
           ++++NL+R+LKS+  ++
Sbjct: 114 LKVDNLVRHLKSLFPST 128

BLAST of CsGy2G010740 vs. ExPASy TrEMBL
Match: A0A0A0LLL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G196880 PE=4 SV=1)

HSP 1 Score: 225 bits (573), Expect = 2.65e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 1   MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL 60
           MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL
Sbjct: 1   MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTL 60

Query: 61  SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115
           SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 61  SATAAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

BLAST of CsGy2G010740 vs. ExPASy TrEMBL
Match: A0A5A7SXP0 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00150 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.40e-07
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 0

Query: 31  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDHH 90
           +E  + PS  R +  FDSE V F+     L    A R+ N L  ESRA  TSI LL +  
Sbjct: 445 IEHDIRPS--RNARVFDSEDVNFATEGFNLLGELALRVINTLTAESRALSTSINLLFERR 504

Query: 91  VEINNLLRYLKSVLSAS 107
           +E++NL+R+LKS+LS++
Sbjct: 505 LEVDNLVRHLKSLLSST 519

BLAST of CsGy2G010740 vs. ExPASy TrEMBL
Match: A0A5A7UKA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00320 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.66e-07
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 30  IVERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDH 89
           ++E  M PS  R    FD++ V  SV    +    AFRI N L  ESR   TSI LLTD 
Sbjct: 31  VIEHDMRPS--RNPRIFDTDDVDKSVKGFFVHLDLAFRIINTLTAESRTLSTSINLLTDK 90

Query: 90  HVEINNLLRYLKSVLSASGDPGL 112
            +E+++L+++LK+++ +S    L
Sbjct: 91  KLEVDSLIQHLKTLILSSSTGAL 111

BLAST of CsGy2G010740 vs. ExPASy TrEMBL
Match: A0A5D3BTK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001300 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.01e-06
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0

Query: 1  MKDMKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNF 40
          MK+ +EL+++SL  + K+A+ENPFSLIE I+ERKM PS F
Sbjct: 15 MKETRELIKYSLRGIGKLANENPFSLIEAIIERKMPPSFF 54

BLAST of CsGy2G010740 vs. ExPASy TrEMBL
Match: A0A5A7SRT0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00950 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.01e-06
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 0

Query: 31  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAAFRIKNCLMVESRAPGTSIVLLTDHH 90
           +E  M  S  R S  FD E V FS+    L      R+ N L  ESRA  TSI LL+D  
Sbjct: 54  IEHDMRSS--RNSRVFDFEDVNFSLEGFNLPRELGSRVINTLTAESRALSTSINLLSDKR 113

Query: 91  VEINNLLRYLKSVLSAS 107
           ++++NL+R+LKS+  ++
Sbjct: 114 LKVDNLVRHLKSLFPST 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN61637.15.46e-74100.00hypothetical protein Csa_006223 [Cucumis sativus][more]
KAA0033955.12.88e-0742.86envelope-like protein [Cucumis melo var. makuwa][more]
KAA0055458.11.37e-0638.55uncharacterized protein E6C27_scaffold221G00300 [Cucumis melo var. makuwa] >TYK0... [more]
TYK01556.16.21e-0660.00hypothetical protein E5676_scaffold451G001300 [Cucumis melo var. makuwa][more]
KAA0033904.18.27e-0640.26uncharacterized protein E6C27_scaffold43059G00950 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0LLL22.65e-74100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G196880 PE=4 SV=1[more]
A0A5A7SXP01.40e-0742.86Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40... [more]
A0A5A7UKA06.66e-0738.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BTK73.01e-0660.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRT04.01e-0640.26Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G010740.1CsGy2G010740.1mRNA