CsGy2G010444 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G010444
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	repetitive proline-rich cell wall protein 3-like
Location	Gy14Chr2: 10211545 .. 10212074 (+)
RNA-Seq Expression	CsGy2G010444
Synteny	CsGy2G010444

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAACTCCAAAAGCCACAATGTTTCTCAAATACTTCCTTCTCCTTCTTCTCGCAGTTGTGCTTCTTACCACAACACAAGCCCTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCAACCACCGACGTCACCCACGGAAAGCTCCCGACCACCATCACCGATCCAAACGAAGAATCCAAATTCTACAGGAGGCCGTCTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAGGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAAATGGCATCCAAAACCAAAGTGGAGGCCATGGACAATTAATGTATCATCTGTTTAATTTCTTTGATAAATAAGTGGTGCTACAAGCTCCAAGGGTAATACTAGGAAGTTCATGATGTTGGCCTTTTGAATTACGTAATATCTGTTAATCCAAACTTCATATGTGTGACATATGGTTTGTATTTTCTGTGTTATTGCTTCACTTATTGTGTAATAATTTAAAGTTCGAATGGAT

mRNA sequence

TCAAACTCCAAAAGCCACAATGTTTCTCAAATACTTCCTTCTCCTTCTTCTCGCAGTTGTGCTTCTTACCACAACACAAGCCCTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCAACCACCGACGTCACCCACGGAAAGCTCCCGACCACCATCACCGATCCAAACGAAGAATCCAAATTCTACAGGAGGCCGTCTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAGGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAAATGGCATCCAAAACCAAAGTGGAGGCCATGGACAATTAATGTATCATCTGTTTAATTTCTTTGATAAATAAGTGGTGCTACAAGCTCCAAGGGTAATACTAGGAAGTTCATGATGTTGGCCTTTTGAATTACGTAATATCTGTTAATCCAAACTTCATATGTGTGACATATGGTTTGTATTTTCTGTGTTATTGCTTCACTTATTGTGTAATAATTTAAAGTTCGAATGGAT

Coding sequence (CDS)

ATGTTTCTCAAATACTTCCTTCTCCTTCTTCTCGCAGTTGTGCTTCTTACCACAACACAAGCCCTGAAACACCCCTCCAACTCCAACCAAGAAGTGATTCCAACCACCGACGTCACCCACGGAAAGCTCCCGACCACCATCACCGATCCAAACGAAGAATCCAAATTCTACAGGAGGCCGTCTCCCTACAAGAAGCCTTACAAGAGGCCACCCTACAAGAGGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCTTCCCACTAA

Protein sequence

MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRPSPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH*

Homology

[Close]

BLAST of CsGy2G010444 vs. NCBI nr
Match: XP_004147144.2 (repetitive proline-rich cell wall protein 3 [Cucumis sativus])

HSP 1 Score: 176 bits (447), Expect = 2.63e-55
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1   MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
           MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP
Sbjct: 15  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 74

Query: 61  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of CsGy2G010444 vs. NCBI nr
Match: NP_001267631.1 (uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 proline-rich protein [Cucumis sativus])

HSP 1 Score: 163 bits (413), Expect = 2.62e-50
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MF KYFLLLLLAVVLLTTTQALKHP NSNQE IP+TD+THGKLPTTITDPNEESKF+RRP
Sbjct: 1  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 60

Query: 61 SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
          SPYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of CsGy2G010444 vs. NCBI nr
Match: KAE8651815.1 (hypothetical protein Csa_006392, partial [Cucumis sativus])

HSP 1 Score: 163 bits (413), Expect = 3.35e-50
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
           MF KYFLLLLLAVVLLTTTQALKHP NSNQE IP+TD+THGKLPTTITDPNEESKF+RRP
Sbjct: 9   MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 68

Query: 61  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           SPYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 69  SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 100

[Close]

BLAST of CsGy2G010444 vs. NCBI nr
Match: XP_008460638.1 (PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0065667.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa] >TYK15518.1 repetitive proline-rich cell wall protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (400), Expect = 2.52e-48
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIPTTDVT G LPTTI DPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           PYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of CsGy2G010444 vs. NCBI nr
Match: POE15980.1 (hypothetical protein BV923_23575 [Pectobacterium odoriferum])

HSP 1 Score: 125 bits (315), Expect = 2.30e-35
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MFLKYFLLLLLAVVLLTTTQALKHPS+SNQEVIP TD       TT TDP+EESKFY++P
Sbjct: 1  MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKP 60

Query: 61 SPYKKPY-KRPPYKRYPPYKKRPPYKKYPPSS 91
            YK+PY KRPPYK+YPPYKK PPYKKYPPSS
Sbjct: 61 Y-YKRPYYKRPPYKKYPPYKKHPPYKKYPPSS 91

[Close]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL
Match: A0A0A0LI79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.27e-55
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1   MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
           MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP
Sbjct: 15  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 74

Query: 61  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL
Match: Q8H0R6 (Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.27e-50
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MF KYFLLLLLAVVLLTTTQALKHP NSNQE IP+TD+THGKLPTTITDPNEESKF+RRP
Sbjct: 1  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 60

Query: 61 SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
          SPYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL
Match: A0A0A0LNP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.95e-50
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1   MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
           MF KYFLLLLLAVVLLTTTQALKHP NSNQE IP+TD+THGKLPTTITDPNEESKF+RRP
Sbjct: 15  MFPKYFLLLLLAVVLLTTTQALKHPFNSNQERIPSTDLTHGKLPTTITDPNEESKFFRRP 74

Query: 61  SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           SPYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 75  SPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 106

[Close]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL
Match: A0A5A7VEY7 (Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00050 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 1.22e-48
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIPTTDVT G LPTTI DPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           PYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

[Close]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL
Match: A0A1S3CE34 (repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC103499417 PE=4 SV=1)

HSP 1 Score: 158 bits (400), Expect = 1.22e-48
Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MFLKYFLLLLLAVVLLTTTQALKHPSNSNQEVIPTTDVTHGKLPTTITDPNEESKFYRRP 60
          MFLKYFLLLLLA VLL+TTQALKHPS S+QEVIPTTDVT G LPTTI DPNEESKFYRRP
Sbjct: 1  MFLKYFLLLLLAAVLLSTTQALKHPSTSDQEVIPTTDVTQGTLPTTIADPNEESKFYRRP 60

Query: 61 SPYKKPYKRPPYKRYPPYKKRPPYKKYPPSSH 92
           PYKKPYKRPPYK+YPPYKKRPPYKKYPPSSH
Sbjct: 61 FPYKKPYKRPPYKKYPPYKKRPPYKKYPPSSH 92

The following BLAST results are available for this feature:

BLAST of CsGy2G010444 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G010444 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147144.2	2.63e-55	100.00	repetitive proline-rich cell wall protein 3 [Cucumis sativus]	[more]
NP_001267631.1	2.62e-50	92.39	uncharacterized protein LOC101210961 precursor [Cucumis sativus] >CAD44256.1 pro...	[more]
KAE8651815.1	3.35e-50	92.39	hypothetical protein Csa_006392, partial [Cucumis sativus]	[more]
XP_008460638.1	2.52e-48	90.22	PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo] >KAA0...	[more]
POE15980.1	2.30e-35	79.35	hypothetical protein BV923_23575 [Pectobacterium odoriferum]	[more]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI79	1.27e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176190 PE=4 SV=1	[more]
Q8H0R6	1.27e-50	92.39	Proline-rich protein OS=Cucumis sativus OX=3659 GN=prp1 PE=2 SV=1	[more]
A0A0A0LNP2	1.95e-50	92.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176690 PE=4 SV=1	[more]
A0A5A7VEY7	1.22e-48	90.22	Repetitive proline-rich cell wall protein 3-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE34	1.22e-48	90.22	repetitive proline-rich cell wall protein 3-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CsGy2G010444 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G010444.1	CsGy2G010444.1	mRNA