CsGy2G010430 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G010430
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 10188716 .. 10188925 (+)
RNA-Seq ExpressionCsGy2G010430
SyntenyCsGy2G010430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCGCATTCCAATTGCAAGGAACACCATGGCTGA

mRNA sequence

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCGCATTCCAATTGCAAGGAACACCATGGCTGA

Coding sequence (CDS)

ATGTCTCTAAAATGGGTTATGGTATTTGCAATTGCAATGGTGCTTCTCACTGCTGAGACTGCAACAGAGGCTCACCGGCCAACGCTAACTCCAAATGATCCGGAAATGAAGTCGATGGTGGGTCATGCTGGTGACAAGACCATTCCTGCCCATGGAGGAAAAGGGTGCAAGAAAGGCCCGCATTCCAATTGCAAGGAACACCATGGCTGA

Protein sequence

MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGPHSNCKEHHG*
Homology
BLAST of CsGy2G010430 vs. NCBI nr
Match: KGN61603.1 (hypothetical protein Csa_006268 [Cucumis sativus])

HSP 1 Score: 145 bits (366), Expect = 7.59e-44
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 HSNCKEHHG 69
          HSNCKEHHG
Sbjct: 61 HSNCKEHHG 69

BLAST of CsGy2G010430 vs. NCBI nr
Match: KAA0065661.1 (hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa] >TYK01420.1 hypothetical protein E5676_scaffold772G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 4.58e-34
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVG-HAGDKTIPAHGGKGCKKG 60
          MSLKWVMVFAIAMVLLTAET+TEAHRP LT NDPEMKS+VG H GDKT P HG KGCKKG
Sbjct: 1  MSLKWVMVFAIAMVLLTAETSTEAHRPRLTQNDPEMKSLVGGHIGDKTKPYHGAKGCKKG 60

Query: 61 PHSNCKEHHG 69
          PH NCK+HHG
Sbjct: 61 PHPNCKQHHG 70

BLAST of CsGy2G010430 vs. NCBI nr
Match: KAA0065660.1 (hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa] >TYK01422.1 hypothetical protein E5676_scaffold772G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 61.6 bits (148), Expect = 1.56e-10
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDP-----EMKSMVGHAGDKTIPAHGGKG 60
          MSL+W MVF IA++LL+A++  E HRP LT +DP     E++S+  H GD   P  G K 
Sbjct: 1  MSLRWAMVFVIAVMLLSAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIG-KT 60

Query: 61 CKKG-PHSNCK 65
          C+KG P+S CK
Sbjct: 61 CRKGLPYSKCK 70

BLAST of CsGy2G010430 vs. ExPASy TrEMBL
Match: A0A0A0LII8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 3.67e-44
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60
          MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP
Sbjct: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVGHAGDKTIPAHGGKGCKKGP 60

Query: 61 HSNCKEHHG 69
          HSNCKEHHG
Sbjct: 61 HSNCKEHHG 69

BLAST of CsGy2G010430 vs. ExPASy TrEMBL
Match: A0A5A7VIV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00020 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 2.22e-34
Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDPEMKSMVG-HAGDKTIPAHGGKGCKKG 60
          MSLKWVMVFAIAMVLLTAET+TEAHRP LT NDPEMKS+VG H GDKT P HG KGCKKG
Sbjct: 1  MSLKWVMVFAIAMVLLTAETSTEAHRPRLTQNDPEMKSLVGGHIGDKTKPYHGAKGCKKG 60

Query: 61 PHSNCKEHHG 69
          PH NCK+HHG
Sbjct: 61 PHPNCKQHHG 70

BLAST of CsGy2G010430 vs. ExPASy TrEMBL
Match: A0A5A7VEN6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00050 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.56e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 1  MSLKWVMVFAIAMVLLTAETATEAHRPTLTPNDP-----EMKSMVGHAGDKTIPAHGGKG 60
          MSL+W MVF IA++LL+A++  E HRP LT +DP     E++S+  H GD   P  G K 
Sbjct: 1  MSLRWAMVFVIAVMLLSAQSLAEVHRPALTQHDPYYPNKEVESVGHHTGDTANPKIG-KT 60

Query: 61 CKKG-PHSNCK 65
          C+KG P+S CK
Sbjct: 61 CRKGLPYSKCK 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN61603.17.59e-44100.00hypothetical protein Csa_006268 [Cucumis sativus][more]
KAA0065661.14.58e-3484.29hypothetical protein E6C27_scaffold90G001210 [Cucumis melo var. makuwa] >TYK0142... [more]
KAA0065660.11.56e-1049.30hypothetical protein E6C27_scaffold90G001190 [Cucumis melo var. makuwa] >TYK0142... [more]
Match NameE-valueIdentityDescription
A0A0A0LII83.67e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G176170 PE=4 SV=1[more]
A0A5A7VIV62.22e-3484.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VEN67.56e-1149.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G010430.1CsGy2G010430.1mRNA