CsGy2G008955 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G008955
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 8136898 .. 8138879 (+)
RNA-Seq Expression	CsGy2G008955
Synteny	CsGy2G008955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATTAAAGTTCACACCCCATTTTCATTACGGTAAACAGAGCCTAAATTTAAACCATTTAAAACCAATCCTAGAGCTCTTTGGACCCCAACTTTGTTATTTTTGGCAATTTCGGAACAGGGGAGACGCATCAGTTTACCGTGAAAGTGAGGGAGAGAGAGATGATTTGGGCGTGAGGGTTGTGGTTTACGGAAGAGGGTTTCAACGATTGTGTAAATGGAAGGAAAAGTTGTCCCCAATTAGTAGGCCGGAAGAAGCGAGTACGTACATTGATTTCATTGATAAACTCCACTCTGATCCAGGTTAACAAATTTTCATGTTTTATAATTCTTTTTACTCCTAATCGCTGCCTAGAATTTAATGAATCGCCATAACTTAGTTGTTGGGTTTGTGTATTTATGTCTAAATTATGGTCCAAAAACCCCAAAATCGGAAAACTTCTACATCCTTCTGTTATTTTACTATTGCCCAATTCTATCCATGAAACGTACTTGAAAGTTTTGAGTTTGATTTGGGACATGCGCACAAGGTGTTTGAAGAAATGCCGAAGAGACATTGACCTGCAATTGGGAACCCTTTCTGTCTGATTGTCTTCAACTTTCTTTTACTTCTACTTTTCAGTTTGAGAAATGGCGAAAGGCATCATATGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTATATCTCTTTATCGCCAGATATTGCGAAGCCTCAACTCCCCAAATTTGCCTCTAAGCTTTGCAGCTAGATTGGCAAAGAAGGCGGAGGTTCGTGCCATTTTCATGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGATCTCATTGATACTGCTGAGTACTCCCTTTCTCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGAGTTACCCTTTCTTCTCTTATGTCAATTTTATGTTAGTTTCCTCTCTATCTACATGAATGAGCGATACTAATGCTTTCCCTTTGTCTAAATTTCTTTGACTTAACTTTTGGGTTCTGCTACAATGTTTTGTATTTGAATGTCATGCATCAAAAACTCATCGACTTGATACTAATCAATCTAAACTTTATG

mRNA sequence

TTTGATTAAAGTTCACACCCCATTTTCATTACGGTAAACAGAGCCTAAATTTAAACCATTTAAAACCAATCCTAGAGCTCTTTGGACCCCAACTTTGTTATTTTTGGCAATTTCGGAACAGGGGAGACGCATCAGTTTACCGTGAAAGTGAGGGAGAGAGAGATGATTTGGGCGTGAGGGTTGTGGTTTACGGAAGAGGGTTTCAACGATTGTGTAAATGGAAGGAAAAGTTGTCCCCAATTAGTAGGCCGGAAGAAGCGATTTGAGAAATGGCGAAAGGCATCATATGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTATATCTCTTTATCGCCAGATATTGCGAAGCCTCAACTCCCCAAATTTGCCTCTAAGCTTTGCAGCTAGATTGGCAAAGAAGGCGGAGGTTCGTGCCATTTTCATGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGATCTCATTGATACTGCTGAGTACTCCCTTTCTCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGAGTTACCCTTTCTTCTCTTATGTCAATTTTATGTTAGTTTCCTCTCTATCTACATGAATGAGCGATACTAATGCTTTCCCTTTGTCTAAATTTCTTTGACTTAACTTTTGGGTTCTGCTACAATGTTTTGTATTTGAATGTCATGCATCAAAAACTCATCGACTTGATACTAATCAATCTAAACTTTATG

Coding sequence (CDS)

ATGGCGAAAGGCATCATATGGGCAACAGCAGAGGATTTAGCGAGGAACCGTGGGCGTGTTATATCTCTTTATCGCCAGATATTGCGAAGCCTCAACTCCCCAAATTTGCCTCTAAGCTTTGCAGCTAGATTGGCAAAGAAGGCGGAGGTTCGTGCCATTTTCATGCTTGCTTCTGAAGAGCGATCTCTTCACAATATTGAAGATCTCATTGATACTGCTGAGTACTCCCTTTCTCTTTTAAGGAAGGGAGAAATTCCCAAATATATTCAATGA

Protein sequence

MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEERSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ*

Homology

[Close]

BLAST of CsGy2G008955 vs. NCBI nr
Match: XP_008457166.1 (PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 uncharacterized protein LOC101207229 [Cucumis sativus] >KAA0039619.1 uncharacterized protein E6C27_scaffold744G00990 [Cucumis melo var. makuwa] >TYK01687.1 uncharacterized protein E5676_scaffold775G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (441), Expect = 1.21e-54
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. NCBI nr
Match: XP_022958896.1 (uncharacterized protein LOC111460046 [Cucurbita moschata])

HSP 1 Score: 171 bits (434), Expect = 1.42e-53
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. NCBI nr
Match: XP_038874375.1 (uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874377.1 uncharacterized protein LOC120067065 [Benincasa hispida])

HSP 1 Score: 171 bits (433), Expect = 2.01e-53
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGI+WATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIVWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. NCBI nr
Match: XP_023547728.1 (uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170 bits (431), Expect = 4.07e-53
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASE+
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASED 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. NCBI nr
Match: XP_023006469.1 (uncharacterized protein LOC111499185 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 6.76e-52
Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          R+LHNIEDLIDTAEYSLSLLRKGEI KYIQ
Sbjct: 61 RALHNIEDLIDTAEYSLSLLRKGEIAKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL
Match: A0A5A7TEG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00090 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 5.87e-55
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL
Match: A0A0A0LL01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 5.87e-55
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL
Match: A0A1S3C4V6 (uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 5.87e-55
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL
Match: A0A6J1H3E8 (uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC111460046 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 6.86e-54
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ
Sbjct: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL
Match: A0A6J1L292 (uncharacterized protein LOC111499185 OS=Cucurbita maxima OX=3661 GN=LOC111499185 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 3.27e-52
Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEE 60
          MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVR IF+LASEE
Sbjct: 1  MAKGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRGIFLLASEE 60

Query: 61 RSLHNIEDLIDTAEYSLSLLRKGEIPKYIQ 90
          R+LHNIEDLIDTAEYSLSLLRKGEI KYIQ
Sbjct: 61 RALHNIEDLIDTAEYSLSLLRKGEIAKYIQ 90

[Close]

BLAST of CsGy2G008955 vs. TAIR 10
Match: AT1G65032.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-26
Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 3  KGIIWATAEDLARNRGRVISLYRQILRSLNSPNLPLSFAARLAKKAEVRAIFMLASEERS 62
          K +IW TAE+ A+NRG+V+SLYRQ+LRS+NSP L LS+A+RLAKKAEVR IF+  SEE S
Sbjct: 2  KSLIWLTAEEAAKNRGKVLSLYRQLLRSINSPKLQLSYASRLAKKAEVRTIFLFGSEEIS 61

Query: 63 LHNIEDLIDTAEYSLSLLRKGEIP 87
           HN+ DLI T EY+LS L++G+IP
Sbjct: 62 KHNVADLIRTGEYALSQLKQGKIP 85

The following BLAST results are available for this feature:

BLAST of CsGy2G008955 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G008955 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457166.1	1.21e-54	100.00	PREDICTED: uncharacterized protein LOC103496906 [Cucumis melo] >XP_031736881.1 u...	[more]
XP_022958896.1	1.42e-53	97.78	uncharacterized protein LOC111460046 [Cucurbita moschata]	[more]
XP_038874375.1	2.01e-53	96.67	uncharacterized protein LOC120067065 [Benincasa hispida] >XP_038874376.1 unchara...	[more]
XP_023547728.1	4.07e-53	96.67	uncharacterized protein LOC111806583 [Cucurbita pepo subsp. pepo]	[more]
XP_023006469.1	6.76e-52	95.56	uncharacterized protein LOC111499185 [Cucurbita maxima]	[more]

BLAST of CsGy2G008955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEG5	5.87e-55	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL01	5.87e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120390 PE=4 SV=1	[more]
A0A1S3C4V6	5.87e-55	100.00	uncharacterized protein LOC103496906 OS=Cucumis melo OX=3656 GN=LOC103496906 PE=...	[more]
A0A6J1H3E8	6.86e-54	97.78	uncharacterized protein LOC111460046 OS=Cucurbita moschata OX=3662 GN=LOC1114600...	[more]
A0A6J1L292	3.27e-52	95.56	uncharacterized protein LOC111499185 OS=Cucurbita maxima OX=3661 GN=LOC111499185...	[more]

BLAST of CsGy2G008955 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65032.1	2.2e-26	65.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36724	COMPLEX 1 LYR-LIKE PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G008955.1	CsGy2G008955.1	mRNA