CsGy2G007110 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G007110
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 5659486 .. 5659807 (+)
RNA-Seq ExpressionCsGy2G007110
SyntenyCsGy2G007110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCCAAAAGCTTGCTACAGTATCAATCGTTATGTTGATGATATTGGCGTGTATTGTATCAACAAGTATGCTCTTAATGACTCTTAACTTCTCTAATTCCATAAAGTTATTTTTGCTAGAACAATGTTTTAAACAATGTTATTTTTGATAATATGGCAGCAAAGGGAGACGTCTTGAACGTGAATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGATTTTGTTACCCAAAACTACCTAGCACTGATAAAGATTGTTGCTGCAATGTTTGA

mRNA sequence

ATGGCAACCCAAAAGCTTGCTACAGTATCAATCGTTATGTTGATGATATTGGCGTGTATTGTATCAACAACAAAGGGAGACGTCTTGAACGTGAATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGATTTTGTTACCCAAAACTACCTAGCACTGATAAAGATTGTTGCTGCAATGTTTGA

Coding sequence (CDS)

ATGGCAACCCAAAAGCTTGCTACAGTATCAATCGTTATGTTGATGATATTGGCGTGTATTGTATCAACAACAAAGGGAGACGTCTTGAACGTGAATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGATTTTGTTACCCAAAACTACCTAGCACTGATAAAGATTGTTGCTGCAATGTTTGA

Protein sequence

MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV*
Homology
BLAST of CsGy2G007110 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 159 bits (403), Expect = 2.61e-49
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 75
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007110 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 151 bits (381), Expect = 5.95e-46
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+SIV+LMI ACI STTKGDVLNV+CVRPCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 75
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007110 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus])

HSP 1 Score: 112 bits (281), Expect = 8.01e-31
Identity = 45/50 (90.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 25 KGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCN 74
          KGDVLN++CV+PCSDTYDDESCYNDCI+ENLGAGFCYPKLPSTDKDCCC+
Sbjct: 15 KGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCS 64

BLAST of CsGy2G007110 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.5 bits (223), Expect = 7.55e-22
Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MA++KL TV  +++M+     S+ KGD+  + C+RPC D +DD+SCY+DC+R N GAGFC
Sbjct: 1  MASRKLFTVFAIVMMMFY-FASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFC 60

Query: 61 YPKLPST--DKDCCCN 74
          YPKLPS   +KDCCCN
Sbjct: 61 YPKLPSVTNEKDCCCN 74

BLAST of CsGy2G007110 vs. NCBI nr
Match: KAA0043464.1 (hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 68.6 bits (166), Expect = 3.61e-13
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M T+KL  V + + ++LAC V+ ++G  L  NC+RPCS+TY   SCY DC   N G G C
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGL-WNCIRPCSETYKSLSCYVDCGALNKGTGAC 60

Query: 61 YPKLPSTDKDCCC 73
           PK P +D+  CC
Sbjct: 61 IPKRPVSDEYVCC 72

BLAST of CsGy2G007110 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 2.88e-46
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+SIV+LMI ACI STTKGDVLNV+CVRPCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCNV 75
          YPKLPSTDKDCCCNV
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007110 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 146 bits (369), Expect = 1.95e-44
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          MATQKLAT+SIV+L+I  CIVSTTKGDVLNV+CVRPC DTYDDESCYNDCIRENLGAGFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCN 74
          YPKLPSTDKDCCCN
Sbjct: 61 YPKLPSTDKDCCCN 74

BLAST of CsGy2G007110 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 6.52e-35
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 23 TTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV 75
          T KGD+LNV+CVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV
Sbjct: 2  TAKGDILNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV 54

BLAST of CsGy2G007110 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.75e-13
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M T+KL  V + + ++LAC V+ ++G  L  NC+RPCS+TY   SCY DC   N G G C
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGL-WNCIRPCSETYKSLSCYVDCGALNKGTGAC 60

Query: 61 YPKLPSTDKDCCC 73
           PK P +D+  CC
Sbjct: 61 IPKRPVSDEYVCC 72

BLAST of CsGy2G007110 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.09e-12
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60
          M TQKL  VS+++ +  +C  S+ +GD L  NCV PCS+   D  C   CI ++ GAGFC
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDL-WNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLP--STDKDCCCN 74
           PKLP  S  K CCCN
Sbjct: 61 VPKLPGISDMKVCCCN 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8651697.12.61e-49100.00hypothetical protein Csa_006343 [Cucumis sativus][more]
KGN61228.15.95e-4692.00hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651701.18.01e-3190.00hypothetical protein Csa_006400, partial [Cucumis sativus][more]
KAG6586428.17.55e-2255.26hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0043464.13.61e-1346.58hypothetical protein E6C27_scaffold1167G00010 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0LHG92.88e-4692.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG51.95e-4490.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0LKF56.52e-3594.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
A0A5A7TJH11.75e-1346.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L1R81.09e-1248.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G007110.1CsGy2G007110.1mRNA