CsGy2G007090 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCAATAATCTCATCGAAGCATAAGGATCCAAATCGTCTCAGAGACATGGCAACCCAAAAGCTTGCTACAATATCAATTGTTGTTTTGATGATATTCGCATGTATTGCATCAACAAGTATGCTCTTTAACTCATAAGTACTCTAATTCCATACAACTATTTTTGCTAGAACAATATTTTATACCATGTTATCTTTGTTAATATGGCAGCAAAAGGAGACGTTTTGAATGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATTCAAGAGAATCTTGGTGCTGGATTTTGTTACCCGAAACTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGACAATAATTGATTGCGTA ATCAATAATCTCATCGAAGCATAAGGATCCAAATCGTCTCAGAGACATGGCAACCCAAAAGCTTGCTACAATATCAATTGTTGTTTTGATGATATTCGCATGTATTGCATCAACAACAAAAGGAGACGTTTTGAATGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATTCAAGAGAATCTTGGTGCTGGATTTTGTTACCCGAAACTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGACAATAATTGATTGCGTA ATGGCAACCCAAAAGCTTGCTACAATATCAATTGTTGTTTTGATGATATTCGCATGTATTGCATCAACAACAAAAGGAGACGTTTTGAATGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCGTGTTATAATGATTGCATTCAAGAGAATCTTGGTGCTGGATTTTGTTACCCGAAACTACCTAGCACCGATAAAGATTGTTGTTGCAATGTTTGA MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFCYPKLPSTDKDCCCNV* Homology
BLAST of CsGy2G007090 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus]) HSP 1 Score: 162 bits (410), Expect = 2.23e-50 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CsGy2G007090 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus]) HSP 1 Score: 152 bits (385), Expect = 1.46e-46 Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of CsGy2G007090 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus]) HSP 1 Score: 115 bits (288), Expect = 6.84e-32 Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsGy2G007090 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.1 bits (235), Expect = 1.12e-23 Identity = 43/76 (56.58%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of CsGy2G007090 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 2.37e-14 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsGy2G007090 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 1.08e-50 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CsGy2G007090 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1) HSP 1 Score: 151 bits (382), Expect = 2.03e-46 Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0
BLAST of CsGy2G007090 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1) HSP 1 Score: 123 bits (309), Expect = 1.60e-35 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy2G007090 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.15e-14 Identity = 38/76 (50.00%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of CsGy2G007090 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.88e-12 Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|