CsGy2G006730 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G006730
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ribosomal RNA processing protein 1 homolog
Location	Gy14Chr2: 5278318 .. 5280892 (-)
RNA-Seq Expression	CsGy2G006730
Synteny	CsGy2G006730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTCTGAGTTAACCCCCCCTCCCCAAAGCTCATCTAGGGTTCTCTCTCAACGCGAACAGGGGAGACCAAAAATCTCCTACCGCCGCCGTTCCGCCTTCTGGGAATTGGGAAATTCCGATTTCATCATATTCAATCGTTTTCCCTCGTACTCATATCCTATTTCAATCCAATTTACCTTTTTTGTTTTGATTTCTTTTCCTCTCCCTTTCTAACTCTGATACCGAACGATCGAGGTTTTTTCGTGAAAGAAAATGGAGGAGGTTGTTGAAGGAGATCAGAATTTCACTTCATTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCACGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTATTTTAATGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCTTTCCTTCTTTCAATGACTAAACTGCCTGATAAAGTGTTGTTGGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAAAGGGGAAGCAGTTACTCGAGAGTCGAAAACGTGGAGATGATGTTGATTCGGTTGATGATACGGTTGTGTATGGGACAGTTTCCTTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTCAAGTATAGAAGAGGCTCCTTCGGAAATTTCCCTGGTTGATGTTGATGTGGGTACTGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAAGAGTAAAAAGGCCACTGATGGAAGTGGCAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAAAAAGTACTGTAAGTCCTGTAATATCAACCAATGGCTCAGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGGTGAACTGCAGAAACATGATGCAGGACTTCCTAGTGAAGCCGTGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTTTGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAACAAAGAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAATGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAGATGCTTTTTGTCTTAGGGTATGAAGTTGCAGAGGTCCAAAGCTTACAGATTTTAATCATTTAATGATTGTCTTAATTACTTCATTTCATTTGGGCGTTGTTCTCACATTGACTTTCATGATCTCAACCGTTTAAAGAGAATGATGATTCTGATGCATCGAGTTGATGATATTTGAAATTGATGCCCTCATGGAATTCTAGCTTAAATGATCAAATTTTCTCTTGGCATTTCATTTTGGTTTTATCTTCCTGGTCCTTTTTCTTTTCTTTTTCCTTAGAGTTCTTGTAGTACAAGGCGGTGGGAGGTGGGAGAAGACGGTTTTGCAGCATAAATGAGTGAGAGGTAGTGTAGAATTTTGGCAGTGTAATGGTTGCTGTTTGTACTTTTTCTTTTGTTTAGTACTTGGTGCCTTTGTAGTTTAGTAGAAAAGGTTCTGTCTTTGGTAAAAACTGGTTGGCCTATGCTACTTGAATGCACCAAATAGTGGTTATAGCTTATAAGTTCGACTATTGAAATATGAGAAGAAGAGCTGGAAATGATTAAAGTTCCTCGGTTCCTAATTATTTCAAGCTGTTTTTTGCACTAGTTTTTCCTTGCAGAATACCATATGATTTGCTCCTAG

mRNA sequence

GGTTCTGAGTTAACCCCCCCTCCCCAAAGCTCATCTAGGGTTCTCTCTCAACGCGAACAGGGGAGACCAAAAATCTCCTACCGCCGCCGTTCCGCCTTCTGGGAATTGGGAAATTCCGATTTCATCATATTCAATCGTTTTCCCTCGTACTCATATCCTATTTCAATCCAATTTACCTTTTTTGTTTTGATTTCTTTTCCTCTCCCTTTCTAACTCTGATACCGAACGATCGAGGTTTTTTCGTGAAAGAAAATGGAGGAGGTTGTTGAAGGAGATCAGAATTTCACTTCATTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCACGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTATTTTAATGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCTTTCCTTCTTTCAATGACTAAACTGCCTGATAAAGTGTTGTTGGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAAAGGGGAAGCAGTTACTCGAGAGTCGAAAACGTGGAGATGATGTTGATTCGGTTGATGATACGGTTGTGTATGGGACAGTTTCCTTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTCAAGTATAGAAGAGGCTCCTTCGGAAATTTCCCTGGTTGATGTTGATGTGGGTACTGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAAGAGTAAAAAGGCCACTGATGGAAGTGGCAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAAAAAGTACTGTAAGTCCTGTAATATCAACCAATGGCTCAGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGGTGAACTGCAGAAACATGATGCAGGACTTCCTAGTGAAGCCGTGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTTTGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAACAAAGAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAATGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAGATGCTTTTTGTCTTAGGGTATGAAGTTGCAGAGGTCCAAAGCTTACAGATTTTAATCATTTAATGATTGTCTTAATTACTTCATTTCATTTGGGCGTTGTTCTCACATTGACTTTCATGATCTCAACCGTTTAAAGAGAATGATGATTCTGATGCATCGAGTTGATGATATTTGAAATTGATGCCCTCATGGAATTCTAGCTTAAATGATCAAATTTTCTCTTGGCATTTCATTTTGGTTTTATCTTCCTGGTCCTTTTTCTTTTCTTTTTCCTTAGAGTTCTTGTAGTACAAGGCGGTGGGAGGTGGGAGAAGACGGTTTTGCAGCATAAATGAGTGAGAGGTAGTGTAGAATTTTGGCAGTGTAATGGTTGCTGTTTGTACTTTTTCTTTTGTTTAGTACTTGGTGCCTTTGTAGTTTAGTAGAAAAGGTTCTGTCTTTGGTAAAAACTGGTTGGCCTATGCTACTTGAATGCACCAAATAGTGGTTATAGCTTATAAGTTCGACTATTGAAATATGAGAAGAAGAGCTGGAAATGATTAAAGTTCCTCGGTTCCTAATTATTTCAAGCTGTTTTTTGCACTAGTTTTTCCTTGCAGAATACCATATGATTTGCTCCTAG

Coding sequence (CDS)

ATGGAGGAGGTTGTTGAAGGAGATCAGAATTTCACTTCATTAGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGAGACAAGACCCTTCGTGTAATCATCAAGACATGGCTTCCAACTCAAACGAGCCTTTCCGATGGCGATATGAAAAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCACGCCGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGTCTTGCTTCTCTGCTCCTCCATCTCGACCTATCGTTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACTATGCGTCGTGAATGGGCCGGGATTGATGCGCTCAGGTTAGATAAGTTTTATCTTTTGATTCGTAGGTTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTTGGTTCAAGTTTTGGAGGAAAGGGTGTATTTTAATGAGGATAAGTTTCATGGGAATGGTGTTAATTATCAAATTGCTTCTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTGTTGATGTCCTGTTCAAGCCTTTCCTTCTTTCAATGACTAAACTGCCTGATAAAGTGTTGTTGGGAAAAATTAAGTCCAATCTTTTTGATGTGATACTGAAAAAGGGGAAGCAGTTACTCGAGAGTCGAAAACGTGGAGATGATGTTGATTCGGTTGATGATACGGTTGTGTATGGGACAGTTTCCTTGACAAATCAATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGGTATTGTTTGCCATGCACGAAGAGTTTCAGAAGTTGGAGAAAGATTTTTTCTCATCAGGGATTGAGATTTCGTTTCCAGATCTTCAAGAGCAAGATGGGGATGAAGTGCCTACTTTGGTTCCTATTTCAAGTATAGAAGAGGCTCCTTCGGAAATTTCCCTGGTTGATGTTGATGTGGGTACTGAATCCACTGATAAGGCACTTAAGAAGCAAAAAAAGAGTAAAAAGGCCACTGATGGAAGTGGCAAGAAGAAGGCTAAGAAGGCTAAGAAGGCAAAGAAGACCACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTGCGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACCTTTGATGAAACTGTTATATCAAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAAAAAGTACTGTAAGTCCTGTAATATCAACCAATGGCTCAGTCAAGAAAAGAAAGAGAGCAAAGAATGTTGGTGAACTGCAGAAACATGATGCAGGACTTCCTAGTGAAGCCGTGGCTGAAGGAAATACAGCTGCAAAAAGCGAAGAGAAGAGTGTTAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTTTGGAAACCCCATAATCCTTTACCACCTGAAAGTTTGAGGCTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCAGGTCCTATCTTGGAATTCCCTGCTACAACAAAGAGGACAAAAAGGAGGGCGGTCTCAATGAGGACTAAGAATGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAATCTAAGAGTACTTAG

Protein sequence

MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTVVYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST*

Homology

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BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 3.3e-24
Identity = 80/228 (35.09%), Postives = 122/228 (53.51%), Query Frame = 0


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLSLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLK 137
            N + S L+H+  SL  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEVVDVL 197
           +++W+       + +L + +   E +   NGV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FKPFLLSMTKLPDKVLLGKIKSNLFDVILKKG----KQLLESRKRGDD 233
             PF     K  D  L+  +   +F+VI+ +     ++ +E RK  +D
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

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BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-22
Identity = 83/258 (32.17%), Postives = 128/258 (49.61%), Query Frame = 0


Query: 18  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLSLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKK 137
            N +A L+  ++ S A   F   F  TM REW GID LRLDK+Y+LIR  L Q F +LK+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 138 HSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVDVLFK- 197
           + W+    +  + VL + V   E +   NGV +    ++L+EL   +  ++ + D   K 
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSK-VGGKELLADQNLKF 195

Query: 198 --PFLLSMTKLPDKVLLGKIKSNLFDVILKKG-----KQLLESRKRGDDVDSVDDTVVYG 257
             PF     K  D  L+  I   +F+ I+ +      + + E + +  D D   + +   
Sbjct: 196 IDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGDGDLSAEEIPEN 255

Query: 258 TVSLTNQFSTTFYELGSS 262
            VSL    S     LG +
Sbjct: 256 EVSLRRAVSKKKTALGKN 270

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BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.8e-21
Identity = 73/237 (30.80%), Postives = 121/237 (51.05%), Query Frame = 0


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHLDLSLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
             E + R  S L+H   +   Q  +   F  TM REW GID LRLDKFY+L+R  L++  
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 134 ALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQKEVVD 193
            +LK   W+      L+++L   +  +      NGV      +FLEEL   +  ++   D
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEI-LHPSSQAPNGVKSHFIEIFLEELTK-VGAEELTAD 192

Query: 194 VLFK---PFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 241
              K   PF     +  D ++L  I   +F+ I+++    +E     +++D+ D+ V
Sbjct: 193 QNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIEDLL--NELDTQDEEV 243

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BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 9.8e-21
Identity = 71/221 (32.13%), Postives = 110/221 (49.77%), Query Frame = 0


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHL--DLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
           Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  L +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 134 ALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPF--LPLQKEV 193
             +K   WD     +L+++L   +  N D    +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEI-LNPDSQAPSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 194 VDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLE 226
                 PF     +  D  +L KI  ++F  I+++    +E
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIE 230

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BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-19
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 15  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELIN 74
           +K LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSW 134
            LA+L+  + +   + + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DLELCRRLV---QVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLP 180
              L + +    Q+  +  +  E+    NG+ + +A ++ EELR   P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYP 174

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BLAST of CsGy2G006730 vs. NCBI nr
Match: XP_004150388.1 (ribosomal RNA processing protein 1 homolog [Cucumis sativus])

HSP 1 Score: 1071 bits (2770), Expect = 0.0
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AVSMRTKNGVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 540/566 (95.41%), Postives = 548/566 (96.82%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+PANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           +VAAEADFG S VSPVISTNGSVKKRKRAKNV ELQKHD  LPSEA AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AVSMRTK GVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. NCBI nr
Match: XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])

HSP 1 Score: 965 bits (2495), Expect = 0.0
Identity = 511/566 (90.28%), Postives = 528/566 (93.29%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQ SLSDGDMKKLWKGLFYC+
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYCI 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERV+F +DKFHGNGVNYQIASVFLEEL+PFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEV+DVLFKPFL SM KLPDKVLLGKIKSNLFDVILK GKQLL+ RK GDDVDS DD V
Sbjct: 181 QKEVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDIV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           V+GT+S TN FSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDF SSG+EIS P LQE
Sbjct: 241 VFGTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+SS EEAPSEIS+VDVDV  +STDKALKKQKKSKKATD SGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAK+TTNGISDLVSENTP NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           R AAEADF  S  SPV+S NGSVKKRKRAKNV   QKH+  L S+  AEGNTAAKSEEKS
Sbjct: 421 RAAAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQKHEVVLSSQVDAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AV+MR K GVRSLPVKRLKKLKSKST
Sbjct: 541 AVAMRAKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. NCBI nr
Match: XP_022149903.1 (ribosomal RNA processing protein 1 homolog [Momordica charantia])

HSP 1 Score: 925 bits (2391), Expect = 0.0
Identity = 492/568 (86.62%), Postives = 523/568 (92.08%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           +KEVVDVLFKPFLLSM KLPDKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD V
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKA 360
           QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SGKKK AKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420
           KKAKKT NGISDLVSENTP NKDNENIV ANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENIV-ANGENSNNEQISDGNMINFDESVISNLQMQF 420

Query: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNV-GELQKHDAGLPSEAVAEGNTAAKSEE 480
           ERVAAEADF  S V PV+S NGSVKKRKRAKN  G+ Q H   LPS+  AE N AAKS E
Sbjct: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540

Query: 541 RRAVSMRTKNGVRSLPVKRLKKLKSKST 566
           RRAV+MR+K GVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of CsGy2G006730 vs. NCBI nr
Match: XP_022929687.1 (ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ribosomal RNA processing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 913 bits (2359), Expect = 0.0
Identity = 493/596 (82.72%), Postives = 515/596 (86.41%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVD+LFKPF+ SM KL DKVLLGKIKSNLFDVILK GKQLLE RK G+DVDS DD V
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           V G++SLTN FSTTFY+LGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKA----------------------- 360
           QD DEVPTLVP+SS EE PSEIS VDVD+  ESTDKA                       
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 -------LKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN 420
                  LKKQKK+KKATDGSGKKK K      KTTNG SDLVSENT  NKDNENIV +N
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTK------KTTNGSSDLVSENTTVNKDNENIVASN 420

Query: 421 GENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFE+VA+EADFG + VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480

Query: 481 NVGELQKHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           NV  LQKHD  LPSE  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST 566
           VTPRGSALKKGIPPGPILEFPAT KRTKRRAV+MR K GVRSLPVKR+KKLKSKST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL
Match: A0A0A0LGX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 1071 bits (2770), Expect = 0.0
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AVSMRTKNGVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 540/566 (95.41%), Postives = 548/566 (96.82%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+PANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           +VAAEADFG S VSPVISTNGSVKKRKRAKNV ELQKHD  LPSEA AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AVSMRTK GVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 1022 bits (2643), Expect = 0.0
Identity = 540/566 (95.41%), Postives = 548/566 (96.82%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR LVQVLEERV+F +DKFHGNGVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVDVLFKPFLLSM KLPDKVL GKIKSNLFDVILK GKQLLESRKRGDD+DS DDT 
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPI S EEAPSEIS+VDVDV  ESTDKALKKQK+SKKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+PANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480
           +VAAEADFG S VSPVISTNGSVKKRKRAKNV ELQKHD  LPSEA AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566
           AVSMRTK GVRSLPVKRLKKLKSKST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL
Match: A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)

HSP 1 Score: 925 bits (2391), Expect = 0.0
Identity = 492/568 (86.62%), Postives = 523/568 (92.08%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCRRL+QVLEERV+F +DKFHGNGVNY IASVFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           +KEVVDVLFKPFLLSM KLPDKVL+GKIKSNLFDV+LK GKQLLE RK GDDVDS DD V
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           VYGT+SLTN FS+TFYELGSSP+CCQGNRKVLFA+HEE+QKLEKDF SSGIEIS PDL E
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKK-AKKA 360
           QDGDEVPTLVP+SS EEAPS+IS+VDVDV  ESTDKALKKQKK+KKATD SGKKK AKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420
           KKAKKT NGISDLVSENTP NKDNENIV ANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENIV-ANGENSNNEQISDGNMINFDESVISNLQMQF 420

Query: 421 ERVAAEADFGKSTVSPVISTNGSVKKRKRAKNV-GELQKHDAGLPSEAVAEGNTAAKSEE 480
           ERVAAEADF  S V PV+S NGSVKKRKRAKN  G+ Q H   LPS+  AE N AAKS E
Sbjct: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFP  TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540

Query: 541 RRAVSMRTKNGVRSLPVKRLKKLKSKST 566
           RRAV+MR+K GVRSLPVKRLKKLKSK+T
Sbjct: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL
Match: A0A6J1ENE5 (ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436194 PE=4 SV=1)

HSP 1 Score: 913 bits (2359), Expect = 0.0
Identity = 493/596 (82.72%), Postives = 515/596 (86.41%), Query Frame = 0


Query: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEEVVEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKF+G+GVNYQIASVFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240
           QKEVVD+LFKPF+ SM KL DKVLLGKIKSNLFDVILK GKQLLE RK G+DVDS DD V
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300
           V G++SLTN FSTTFY+LGSSPDCCQGNRKVLFAMHEE+QKLEKD  SSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKA----------------------- 360
           QD DEVPTLVP+SS EE PSEIS VDVD+  ESTDKA                       
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 -------LKKQKKSKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPANKDNENIVVAN 420
                  LKKQKK+KKATDGSGKKK K      KTTNG SDLVSENT  NKDNENIV +N
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTK------KTTNGSSDLVSENTTVNKDNENIVASN 420

Query: 421 GENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGKSTVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFE+VA+EADFG + VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480

Query: 481 NVGELQKHDAGLPSEAVAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           NV  LQKHD  LPSE  AEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFPATTKRTKRRAVSMRTKNGVRSLPVKRLKKLKSKST 566
           VTPRGSALKKGIPPGPILEFPAT KRTKRRAV+MR K GVRSLPVKR+KKLKSKST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of CsGy2G006730 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 460.7 bits (1184), Expect = 1.7e-129
Identity = 277/569 (48.68%), Postives = 365/569 (64.15%), Query Frame = 0


Query: 2   EEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 61
           E+ +  +++  SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVW
Sbjct: 11  EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVW 70

Query: 62  HADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRF 121
           HADK   QSELI+RL+S L  L L L++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF
Sbjct: 71  HADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRF 130

Query: 122 LHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPLQ 181
           LH FF+L+  +SWDLE  RRL+ +L +     +DKF GNGVNY I S F+EELRPFLPL+
Sbjct: 131 LHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLR 190

Query: 182 KEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDD-VDSVDDTV 241
           KEV+++LF PF+  M  + DK+L+GKIKSNLFD +LK GK+LL  ++ GDD V   DD V
Sbjct: 191 KEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVV 250

Query: 242 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 301
           V G+++L+ +F+  FYELGSSP+C QGNRK++FA+H+EF +LEKD  SS IE+S  +   
Sbjct: 251 VLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASR 310

Query: 302 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 361
              DEVP  VP+S                  ES    + K KK       S KK  KK  
Sbjct: 311 PGNDEVPESVPVS------------------ESNTNVVSKSKKIVANGSSSKKKGLKKCS 370

Query: 362 KAKKTT---NGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQM 421
           K KK +     + D V +    NKD                       +FDET+IS+L+ 
Sbjct: 371 KTKKDSVKKGAVMDSVVD--LGNKDE----------------------SFDETMISDLRQ 430

Query: 422 QFERVAAEADFGKSTVSPV------ISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGN 481
           +FE++A+E    KS V+ V      +S +   KKRKR +N GE Q       +   AE +
Sbjct: 431 EFEKIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKR-ENKGEEQ---VSTVNRDAAETS 490

Query: 482 TAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFP 541
            A  S EKS K+VRF+MKNNLVWKPH PLPP+ LR PPS TPRGSALK+GIP GP+ E  
Sbjct: 491 LAGPSSEKSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL- 528

Query: 542 ATTKRTKRRAVSMRTKNGVRSLPVKRLKK 561
             +++TK++ V    + GV+S  +K LKK
Sbjct: 551 -ASRKTKKK-VKPAARRGVKS--IKNLKK 528

The following BLAST results are available for this feature:

BLAST of CsGy2G006730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	3.3e-24	35.09	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	2.3e-22	32.17	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56182	9.8e-21	30.80	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
P56183	9.8e-21	32.13	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
Q9Y7M6	1.1e-19	36.90	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of CsGy2G006730 vs. NCBI nr


Match Name	Identity	Description
XP_004150388.1	100.00	ribosomal RNA processing protein 1 homolog [Cucumis sativus]	[more]
XP_008450828.1	95.41	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556...	[more]
XP_038875379.1	90.28	ribosomal RNA processing protein 1 homolog [Benincasa hispida]	[more]
XP_022149903.1	86.62	ribosomal RNA processing protein 1 homolog [Momordica charantia]	[more]
XP_022929687.1	82.72	ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ...	[more]

BLAST of CsGy2G006730 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LGX3	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]
A0A5A7U008	95.41	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	95.41	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A6J1D805	86.62	ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1ENE5	82.72	ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsGy2G006730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	1.7e-129	48.68	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 2.3E-55 score: 187.8
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 13..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..383
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 13..548

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G006730.1	CsGy2G006730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0030688	preribosome, small subunit precursor