CsGy2G006170 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G006170
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	OSBP(Oxysterol binding protein)-related protein 4B, putative
Location	Gy14Chr2: 4523653 .. 4524228 (+)
RNA-Seq Expression	CsGy2G006170
Synteny	CsGy2G006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGAAATTATGTCATTGGGATATGAAGAACAAAGTTATAACAAGAACATCTTCGATTGGTTATTCTTCTCATAGCATTTATTACTCTGGAACAGCTGATCAAGGAGTCCCTTTCAAATGGGAAACACAACCGGGAACTCCCAAAGATCCTCCTCCTCAAGATTTGCTTCCACCTCTCAGCCCTCCGCCTGCCGTTCTCAGCCTTGGGGTACCAAAACCCTACATCGATCAACCGAAATCTCGACCCCTACCTCGGATGAGACTTAGGTTTTGGAAGAAAATCATGAAGAGTAGGGATGGTGGAAAAGCCGCTGCTCAAACAACAACTATAGATCACTATAACGATAAGTTGGAAACCTTTTCATTTCTTAGTTCTGATTGCGAGTTCATGGCGTCTCCTAGTCCTCAGAACTCAATGTCGTCGTCTTCAACATCGTCATCTTCTTCATCTCCGTCATCTTTCCTCGATTCGTTAAACGTTCGAAATATGAGGAAGGTTTCATTTGGAAGGCCTTCAAGTTGGAATAATGCTTGGCAAATTAATAAAATTCTGGCTTGTTACCATTCCTAA

mRNA sequence

ATGGAAGGGAAATTATGTCATTGGGATATGAAGAACAAAGTTATAACAAGAACATCTTCGATTGGTTATTCTTCTCATAGCATTTATTACTCTGGAACAGCTGATCAAGGAGTCCCTTTCAAATGGGAAACACAACCGGGAACTCCCAAAGATCCTCCTCCTCAAGATTTGCTTCCACCTCTCAGCCCTCCGCCTGCCGTTCTCAGCCTTGGGGTACCAAAACCCTACATCGATCAACCGAAATCTCGACCCCTACCTCGGATGAGACTTAGGTTTTGGAAGAAAATCATGAAGAGTAGGGATGGTGGAAAAGCCGCTGCTCAAACAACAACTATAGATCACTATAACGATAAGTTGGAAACCTTTTCATTTCTTAGTTCTGATTGCGAGTTCATGGCGTCTCCTAGTCCTCAGAACTCAATGTCGTCGTCTTCAACATCGTCATCTTCTTCATCTCCGTCATCTTTCCTCGATTCGTTAAACGTTCGAAATATGAGGAAGGTTTCATTTGGAAGGCCTTCAAGTTGGAATAATGCTTGGCAAATTAATAAAATTCTGGCTTGTTACCATTCCTAA

Coding sequence (CDS)

ATGGAAGGGAAATTATGTCATTGGGATATGAAGAACAAAGTTATAACAAGAACATCTTCGATTGGTTATTCTTCTCATAGCATTTATTACTCTGGAACAGCTGATCAAGGAGTCCCTTTCAAATGGGAAACACAACCGGGAACTCCCAAAGATCCTCCTCCTCAAGATTTGCTTCCACCTCTCAGCCCTCCGCCTGCCGTTCTCAGCCTTGGGGTACCAAAACCCTACATCGATCAACCGAAATCTCGACCCCTACCTCGGATGAGACTTAGGTTTTGGAAGAAAATCATGAAGAGTAGGGATGGTGGAAAAGCCGCTGCTCAAACAACAACTATAGATCACTATAACGATAAGTTGGAAACCTTTTCATTTCTTAGTTCTGATTGCGAGTTCATGGCGTCTCCTAGTCCTCAGAACTCAATGTCGTCGTCTTCAACATCGTCATCTTCTTCATCTCCGTCATCTTTCCTCGATTCGTTAAACGTTCGAAATATGAGGAAGGTTTCATTTGGAAGGCCTTCAAGTTGGAATAATGCTTGGCAAATTAATAAAATTCTGGCTTGTTACCATTCCTAA

Protein sequence

MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAWQINKILACYHS*

Homology

[Close]

BLAST of CsGy2G006170 vs. NCBI nr
Match: XP_031737371.1 (uncharacterized protein LOC116402243 [Cucumis sativus] >KAE8651668.1 hypothetical protein Csa_021345 [Cucumis sativus])

HSP 1 Score: 375 bits (963), Expect = 5.52e-131
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEGKLCHWDMKNKVI+RTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGKLCHWDMKNKVISRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE 120
           LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE
Sbjct: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE 120

Query: 121 TFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW 180
           TFSFLSSDCEFMASPSPQ+SMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW
Sbjct: 121 TFSFLSSDCEFMASPSPQSSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW 180

Query: 181 QINKILACYHS 191
           QINK+LACYHS
Sbjct: 181 QINKMLACYHS 191

[Close]

BLAST of CsGy2G006170 vs. NCBI nr
Match: TYK01355.1 (putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (850), Expect = 9.31e-114
Identity = 172/192 (89.58%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEG+L HWDMKNKVI+RTSSIG SSHSIYYSGTA+QGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPY-IDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKL 120
           LSPPPAVLSLGVPKP  IDQPKSR LPRMRLRFWKKIMKSRDGG+AA QTT IDHYNDKL
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAA-QTTPIDHYNDKL 120

Query: 121 ETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNA 180
           ETFSFLSSDCEFMASPSP++SMSSSSTSSSSSSPSSF+DSLNV N +KVSFGRPSSWNNA
Sbjct: 121 ETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRPSSWNNA 180

Query: 181 WQINKILACYHS 191
           WQIN++L CYHS
Sbjct: 181 WQINRMLVCYHS 191

[Close]

BLAST of CsGy2G006170 vs. NCBI nr
Match: KAA0055564.1 (putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. makuwa])

HSP 1 Score: 330 bits (845), Expect = 5.38e-113
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEG+L HWDMKNKVI+RTSSIG SSHSIYYSGTA+QGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPY-IDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKL 120
           LSPPPAVLSLGVPKP  IDQPKSR LPRMRLRFWKKIMKSRDGG+AA QTT IDHYNDKL
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAA-QTTPIDHYNDKL 120

Query: 121 ETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNA 180
           ETFSFLSSDCEFMASPSP++ MSSSSTSSSSSSPSSF+DSLNV N +KVSFGRPSSWNNA
Sbjct: 121 ETFSFLSSDCEFMASPSPRDPMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRPSSWNNA 180

Query: 181 WQINKILACYHS 191
           WQIN++L CYHS
Sbjct: 181 WQINRMLVCYHS 191

[Close]

BLAST of CsGy2G006170 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 251 bits (640), Expect = 7.30e-82
Identity = 137/190 (72.11%), Postives = 160/190 (84.21%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           M+G   HWDMK+KVI RTSSIG SS S YY G A+ GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MDGNF-HWDMKSKVIARTSSIGCSSRSTYYCGAAE-GVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE 120
           LSPPPAVLSLG+P P I++PK+RP P M+LRFW+++ KSRD G+AA Q TTID+ N KLE
Sbjct: 61  LSPPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAA-QATTIDYSNGKLE 120

Query: 121 TFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW 180
           TFSFLSSDCEFMASP  ++SMSSSS+SSSSSSPSS ++SL VR+M +VS GRPSS   A 
Sbjct: 121 TFSFLSSDCEFMASP--RDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGTAG 180

Query: 181 QINKILACYH 190
           +I++ILACYH
Sbjct: 181 KIHRILACYH 185

[Close]

BLAST of CsGy2G006170 vs. NCBI nr
Match: KAG7029810.1 (hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248 bits (632), Expect = 1.16e-80
Identity = 138/192 (71.88%), Postives = 161/192 (83.85%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           M+G   HWDMK+KVI RTSSIG SS S YY G A+ GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MDGNF-HWDMKSKVIARTSSIGCSSRSTYYCGAAE-GVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPR--MRLRFWKKIMKSRDGGKAAAQTTTIDHYNDK 120
           LSPPPAV+SLG+P P I++PK+RP PR  M+LRFW+++ KSRDGG+AA Q TTID+ NDK
Sbjct: 61  LSPPPAVISLGLPLPCIEKPKTRPRPRPTMKLRFWRRVKKSRDGGRAA-QATTIDYSNDK 120

Query: 121 LETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNN 180
           LETFSFLSSDCEFMASP  ++SMSSS   SSSSSPSS ++SL VRNM +VS GRPSS + 
Sbjct: 121 LETFSFLSSDCEFMASP--RDSMSSS---SSSSSPSSLIESLTVRNMGRVSLGRPSSCST 180

Query: 181 AWQINKILACYH 190
           A +I++ILACYH
Sbjct: 181 AGKIHRILACYH 184

[Close]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL
Match: A0A5D3BQA0 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00410 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 4.51e-114
Identity = 172/192 (89.58%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEG+L HWDMKNKVI+RTSSIG SSHSIYYSGTA+QGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPY-IDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKL 120
           LSPPPAVLSLGVPKP  IDQPKSR LPRMRLRFWKKIMKSRDGG+AA QTT IDHYNDKL
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAA-QTTPIDHYNDKL 120

Query: 121 ETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNA 180
           ETFSFLSSDCEFMASPSP++SMSSSSTSSSSSSPSSF+DSLNV N +KVSFGRPSSWNNA
Sbjct: 121 ETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRPSSWNNA 180

Query: 181 WQINKILACYHS 191
           WQIN++L CYHS
Sbjct: 181 WQINRMLVCYHS 191

[Close]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL
Match: A0A5A7UK88 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00410 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 2.61e-113
Identity = 171/192 (89.06%), Postives = 181/192 (94.27%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEG+L HWDMKNKVI+RTSSIG SSHSIYYSGTA+QGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPY-IDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKL 120
           LSPPPAVLSLGVPKP  IDQPKSR LPRMRLRFWKKIMKSRDGG+AA QTT IDHYNDKL
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAA-QTTPIDHYNDKL 120

Query: 121 ETFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNA 180
           ETFSFLSSDCEFMASPSP++ MSSSSTSSSSSSPSSF+DSLNV N +KVSFGRPSSWNNA
Sbjct: 121 ETFSFLSSDCEFMASPSPRDPMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRPSSWNNA 180

Query: 181 WQINKILACYHS 191
           WQIN++L CYHS
Sbjct: 181 WQINRMLVCYHS 191

[Close]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL
Match: A0A6J1K9Q8 (uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 3.53e-82
Identity = 137/190 (72.11%), Postives = 160/190 (84.21%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           M+G   HWDMK+KVI RTSSIG SS S YY G A+ GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MDGNF-HWDMKSKVIARTSSIGCSSRSTYYCGAAE-GVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE 120
           LSPPPAVLSLG+P P I++PK+RP P M+LRFW+++ KSRD G+AA Q TTID+ N KLE
Sbjct: 61  LSPPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAA-QATTIDYSNGKLE 120

Query: 121 TFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW 180
           TFSFLSSDCEFMASP  ++SMSSSS+SSSSSSPSS ++SL VR+M +VS GRPSS   A 
Sbjct: 121 TFSFLSSDCEFMASP--RDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGTAG 180

Query: 181 QINKILACYH 190
           +I++ILACYH
Sbjct: 181 KIHRILACYH 185

[Close]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL
Match: A0A6J1ENL5 (uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC111436141 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 7.48e-81
Identity = 136/190 (71.58%), Postives = 159/190 (83.68%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           M+G   HWDMK+KVI RTSSIG SS S YY G A+ GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MDGNF-HWDMKSKVIARTSSIGCSSRSTYYCGAAE-GVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKLE 120
           LSPPPAV+SLG+P P I++PK+RP P M+L FW+++ KSRDGG+AA Q TTID+ NDKLE
Sbjct: 61  LSPPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAA-QATTIDYSNDKLE 120

Query: 121 TFSFLSSDCEFMASPSPQNSMSSSSTSSSSSSPSSFLDSLNVRNMRKVSFGRPSSWNNAW 180
           TFSFLSSDCEFMASP  ++SMSSS   SSSSSPSS ++SL VRNM +VS GRPSS + A 
Sbjct: 121 TFSFLSSDCEFMASP--RDSMSSS---SSSSSPSSLIESLTVRNMGRVSLGRPSSCSTAG 180

Query: 181 QINKILACYH 190
           +I++ILACYH
Sbjct: 181 KIHRILACYH 182

[Close]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL
Match: A0A0A0LHA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059740 PE=4 SV=1)

HSP 1 Score: 244 bits (624), Expect = 1.05e-80
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MEGKLCHWDMKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60
           MEGKLCHWDMKNKVI+RTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGKLCHWDMKNKVISRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKL 119
           LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDK+
Sbjct: 61  LSPPPAVLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYNDKI 119

[Close]

BLAST of CsGy2G006170 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-15
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 10 MKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLS 69
          MK       SSI  +S   YY     +GVPF+WE QPGTP +  P++++PPLSPPPA+LS
Sbjct: 1  MKKDTCKEGSSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLS 60

Query: 70 LGVPKP--YIDQPKSRPLP-RMRLRFWKKI 97
          LG+PKP   I++PK+   P +++LR WK +
Sbjct: 61 LGLPKPSISIEEPKNFVFPTKLKLRNWKHL 90

[Close]

BLAST of CsGy2G006170 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-15
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 10 MKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLS 69
          MK       SSI  +S   YY     +GVPF+WE QPGTP +  P++++PPLSPPPA+LS
Sbjct: 1  MKKDTCKEGSSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLS 60

Query: 70 LGVPKP--YIDQPKSRPLP-RMRLRFWKKI 97
          LG+PKP   I++PK+   P +++LR WK +
Sbjct: 61 LGLPKPSISIEEPKNFVFPTKLKLRNWKHL 90

[Close]

BLAST of CsGy2G006170 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 10 MKNKVITRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQD--LLPPLSPPPAV 69
          + +K+I + SS   SS  IYY G A   VPF WET+PGTPK     +   LPPL+PPP+ 
Sbjct: 13 ISSKIIVKESSQVNSSSRIYYYGGA--SVPFLWETRPGTPKHALFSESLRLPPLTPPPSY 72

[Close]

BLAST of CsGy2G006170 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.2e-04
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 25  SHSIYYSGTADQGVPFKWETQPGTPKDPPPQ-DLLPPLSPPPAVLS 70
           S  IYY   A   VPF+WE+ PGTPK P  +   LPPL+PPP+  S
Sbjct: 62  SFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFS 107

The following BLAST results are available for this feature:

BLAST of CsGy2G006170 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737371.1	5.52e-131	98.43	uncharacterized protein LOC116402243 [Cucumis sativus] >KAE8651668.1 hypothetica...	[more]
TYK01355.1	9.31e-114	89.58	putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. m...	[more]
KAA0055564.1	5.38e-113	89.06	putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. m...	[more]
XP_022997465.1	7.30e-82	72.11	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
KAG7029810.1	1.16e-80	71.88	hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsGy2G006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQA0	4.51e-114	89.58	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]
A0A5A7UK88	2.61e-113	89.06	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]
A0A6J1K9Q8	3.53e-82	72.11	uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375...	[more]
A0A6J1ENL5	7.48e-81	71.58	uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A0A0LHA2	1.05e-80	98.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059740 PE=4 SV=1	[more]

BLAST of CsGy2G006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	6.2e-15	47.78	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	6.2e-15	47.78	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT2G40475.1	3.4e-05	48.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	2.2e-04	52.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..65
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 10..179
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 10..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G006170.1	CsGy2G006170.1	mRNA