CsGy2G005850 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G005850
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 4123302 .. 4123667 (-)
RNA-Seq Expression	CsGy2G005850
Synteny	CsGy2G005850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGCAGGTTGGTCATTACGATGGTGGGTACCAGAACTATGACTATTCGAATGACTATTCATACAATCAAGGACAAGAAGTTCAGGCAACAATTGGATACATTGAGGTTATAGAGGACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTGTACAACCAGCTCAACCAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACCGGAAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACTTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTGCGCCGAATTATTAAAATGTAA

mRNA sequence

ATGTCAAAGCAGGTTGGTCATTACGATGGTGGGTACCAGAACTATGACTATTCGAATGACTATTCATACAATCAAGGACAAGAAGTTCAGGCAACAATTGGATACATTGAGGTTATAGAGGACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTGTACAACCAGCTCAACCAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACCGGAAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACTTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTGCGCCGAATTATTAAAATGTAA

Coding sequence (CDS)

ATGTCAAAGCAGGTTGGTCATTACGATGGTGGGTACCAGAACTATGACTATTCGAATGACTATTCATACAATCAAGGACAAGAAGTTCAGGCAACAATTGGATACATTGAGGTTATAGAGGACAACCAGATGAGCAGCTACGAACAAAGTTGGAGGACTCATGATCGTAATAGGCAAACTGGAAGCTGTACAACCAGCTCAACCAAGGCGGTTGCTTCCCGTGGTGAAACCTTCAAAGAAAGATCAACCGGAAGAGTTGGCGCCAAGGACGAGTTCAAAACCACGTCCACTTACAGGGTTGGAGACAAAAGTGGATATACTGAGTATCAGTGTCAAGAGAGGTTGCGCCGAATTATTAAAATGTAA

Protein sequence

MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIKM*

Homology

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BLAST of CsGy2G005850 vs. NCBI nr
Match: KGN61102.1 (hypothetical protein Csa_021323 [Cucumis sativus])

HSP 1 Score: 243 bits (619), Expect = 8.19e-81
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT 60
           MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT
Sbjct: 1   MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT 60

Query: 61  GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK 120
           GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK
Sbjct: 61  GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK 120

[Close]

BLAST of CsGy2G005850 vs. NCBI nr
Match: TYK10872.1 (uncharacterized protein E5676_scaffold231G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 212 bits (539), Expect = 2.59e-68
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDY--SNDYSYNQGQEVQATIGYIEVIEDN-QMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQNYDY  S+DYSYNQG EVQATIGY+EV+EDN QMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGSEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRR 118
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQER RR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRR 120

[Close]

BLAST of CsGy2G005850 vs. NCBI nr
Match: XP_008452151.1 (PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo] >KAA0067263.1 uncharacterized protein E6C27_scaffold418G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (538), Expect = 3.69e-68
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDY--SNDYSYNQGQEVQATIGYIEVIEDN-QMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQNYDY  S+DYSYNQG EVQATIGY+EV+EDN QMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRR 118
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQER RR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRR 120

[Close]

BLAST of CsGy2G005850 vs. NCBI nr
Match: XP_038889670.1 (uncharacterized protein LOC120079530 [Benincasa hispida])

HSP 1 Score: 168 bits (426), Expect = 3.51e-51
Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 0


Query: 18  SNDYSYNQ--GQEVQATIGYIEVIED-----NQMSSYEQSWRTHDRNRQTGSCTTSSTKA 77
           S D+SYNQ  G EVQATIGY+EV+       NQ+SSYEQSWRTHDRNRQTG+ TT+STKA
Sbjct: 5   SGDHSYNQSQGHEVQATIGYMEVVSPCVENKNQLSSYEQSWRTHDRNRQTGTYTTTSTKA 64

Query: 78  VASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRI 118
           VASRGETFKERSTGR+GAKDEFKTTSTYRVGDKSGYTEYQCQER RR+
Sbjct: 65  VASRGETFKERSTGRIGAKDEFKTTSTYRVGDKSGYTEYQCQERFRRV 112

[Close]

BLAST of CsGy2G005850 vs. NCBI nr
Match: XP_022997473.1 (uncharacterized protein LOC111492379 [Cucurbita maxima])

HSP 1 Score: 159 bits (401), Expect = 2.97e-47
Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 3   KQVGHYDGGYQNYDYS-NDYSYN---QGQEVQATIGYIEVI--EDNQMSSYEQSWRTHDR 62
           KQ+  +  GYQ+YDY  +DYSY+   QG    A +GY+ V+  ED Q+SSYEQSWRTHDR
Sbjct: 4   KQLDQWGSGYQSYDYDLDDYSYSPPSQGNVQVARMGYVGVVSAEDKQVSSYEQSWRTHDR 63

Query: 63  NRQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLR 118
           NRQTGS TT+STK VASRGETFKERS+GRVG+KDEFKTTSTYRVGD+SGYTEYQ QER R
Sbjct: 64  NRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQHQERFR 123

[Close]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL
Match: A0A0A0LK69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 3.96e-81
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT 60
           MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT
Sbjct: 1   MSKQVGHYDGGYQNYDYSNDYSYNQGQEVQATIGYIEVIEDNQMSSYEQSWRTHDRNRQT 60

Query: 61  GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK 120
           GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK
Sbjct: 61  GSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRRIIK 120

[Close]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL
Match: A0A5D3CHW8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00440 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 1.26e-68
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDY--SNDYSYNQGQEVQATIGYIEVIEDN-QMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQNYDY  S+DYSYNQG EVQATIGY+EV+EDN QMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGSEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRR 118
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQER RR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRR 120

[Close]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL
Match: A0A5A7VGP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00800 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 1.78e-68
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDY--SNDYSYNQGQEVQATIGYIEVIEDN-QMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQNYDY  S+DYSYNQG EVQATIGY+EV+EDN QMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRR 118
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQER RR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRR 120

[Close]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL
Match: A0A1S3BT44 (uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=4 SV=1)

HSP 1 Score: 211 bits (538), Expect = 1.78e-68
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 1   MSKQVGHYDGGYQNYDY--SNDYSYNQGQEVQATIGYIEVIEDN-QMSSYEQSWRTHDRN 60
           MSKQVG YDGGYQNYDY  S+DYSYNQG EVQATIGY+EV+EDN QMSSYEQSWRTHDRN
Sbjct: 1   MSKQVGRYDGGYQNYDYDYSDDYSYNQGPEVQATIGYLEVVEDNNQMSSYEQSWRTHDRN 60

Query: 61  RQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLRR 118
           RQTGS TT+STKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQER RR
Sbjct: 61  RQTGSYTTTSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERFRR 120

[Close]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL
Match: A0A6J1KE05 (uncharacterized protein LOC111492379 OS=Cucurbita maxima OX=3661 GN=LOC111492379 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 1.44e-47
Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 0


Query: 3   KQVGHYDGGYQNYDYS-NDYSYN---QGQEVQATIGYIEVI--EDNQMSSYEQSWRTHDR 62
           KQ+  +  GYQ+YDY  +DYSY+   QG    A +GY+ V+  ED Q+SSYEQSWRTHDR
Sbjct: 4   KQLDQWGSGYQSYDYDLDDYSYSPPSQGNVQVARMGYVGVVSAEDKQVSSYEQSWRTHDR 63

Query: 63  NRQTGSCTTSSTKAVASRGETFKERSTGRVGAKDEFKTTSTYRVGDKSGYTEYQCQERLR 118
           NRQTGS TT+STK VASRGETFKERS+GRVG+KDEFKTTSTYRVGD+SGYTEYQ QER R
Sbjct: 64  NRQTGSYTTASTKEVASRGETFKERSSGRVGSKDEFKTTSTYRVGDRSGYTEYQHQERFR 123

The following BLAST results are available for this feature:

BLAST of CsGy2G005850 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G005850 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61102.1	8.19e-81	100.00	hypothetical protein Csa_021323 [Cucumis sativus]	[more]
TYK10872.1	2.59e-68	90.08	uncharacterized protein E5676_scaffold231G00440 [Cucumis melo var. makuwa]	[more]
XP_008452151.1	3.69e-68	90.08	PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo] >KAA0067263.1 unc...	[more]
XP_038889670.1	3.51e-51	80.56	uncharacterized protein LOC120079530 [Benincasa hispida]	[more]
XP_022997473.1	2.97e-47	70.49	uncharacterized protein LOC111492379 [Cucurbita maxima]	[more]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK69	3.96e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G049910 PE=4 SV=1	[more]
A0A5D3CHW8	1.26e-68	90.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VGP1	1.78e-68	90.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BT44	1.78e-68	90.08	uncharacterized protein LOC103493252 OS=Cucumis melo OX=3656 GN=LOC103493252 PE=...	[more]
A0A6J1KE05	1.44e-47	70.49	uncharacterized protein LOC111492379 OS=Cucurbita maxima OX=3661 GN=LOC111492379...	[more]

BLAST of CsGy2G005850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G005850.2	CsGy2G005850.2	mRNA