CsGy2G005225 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G005225
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSHSP domain-containing protein
LocationGy14Chr2: 3572410 .. 3572730 (-)
RNA-Seq ExpressionCsGy2G005225
SyntenyCsGy2G005225
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGA

mRNA sequence

ATGGGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGA

Coding sequence (CDS)

ATGGGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGA

Protein sequence

MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI*
Homology
BLAST of CsGy2G005225 vs. NCBI nr
Match: KGN61039.1 (hypothetical protein Csa_021124 [Cucumis sativus])

HSP 1 Score: 209 bits (531), Expect = 7.20e-68
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60
           M LLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60

Query: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106
           FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of CsGy2G005225 vs. NCBI nr
Match: KAA0056096.1 (hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ96421.1 hypothetical protein E5676_scaffold546G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (492), Expect = 7.28e-62
Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNS-GGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHYEKLNS GGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of CsGy2G005225 vs. NCBI nr
Match: KAG6599155.1 (Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128 bits (321), Expect = 5.32e-32
Identity = 74/105 (70.48%), Postives = 83/105 (79.05%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60
           MGLLE AGIGGRRW   YEKL+   ++  VV  RRRW+KK LKRG KGFRLYR TR +S 
Sbjct: 452 MGLLETAGIGGRRWN-QYEKLHCEDND--VVKCRRRWMKKTLKRGKKGFRLYRLTRSRS- 511

Query: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
           F LKVSFL+ +SRRIREIV+RMKV EDVC N+IF TQWGLP LSY
Sbjct: 512 FCLKVSFLVLMSRRIREIVNRMKV-EDVCANVIFFTQWGLPTLSY 551

BLAST of CsGy2G005225 vs. NCBI nr
Match: KAF5946811.1 (hypothetical protein HYC85_017039 [Camellia sinensis])

HSP 1 Score: 69.3 bits (168), Expect = 1.42e-12
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60
           MG  ++  +GGR W   Y++L S    +V V  RRRWV +M  + +KGFRL +  RL   
Sbjct: 1   MGFEDV--VGGR-WTTRYKRLTSNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRL--- 60

Query: 61  FGLKVSFLMSLSRRIR----EIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
              K   ++ L RR+     E+V+RMK  +++CP IIFS QWGLPVLS+
Sbjct: 61  -NWKAFSIVMLPRRMAQIYAEVVNRMKT-DEICPAIIFSGQWGLPVLSH 100

BLAST of CsGy2G005225 vs. NCBI nr
Match: EOY11805.1 (Uncharacterized protein TCM_026865 [Theobroma cacao])

HSP 1 Score: 70.1 bits (170), Expect = 3.24e-12
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 9   IGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSSFGLKVSFL 68
           +GG    C YEKL + G  R     RRRWVKKM   G+KG RL R  +LK+     V F 
Sbjct: 10  LGGHPVPCRYEKLRNVGDARP----RRRWVKKM-SGGLKGLRLSRSRKLKTL--CSVVFA 69

Query: 69  MSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
             ++R   +I  R+K+   +CPNIIF+T WGLP LS+
Sbjct: 70  NRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

BLAST of CsGy2G005225 vs. ExPASy TrEMBL
Match: A0A0A0LJ29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 3.49e-68
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60
           M LLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60

Query: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106
           FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of CsGy2G005225 vs. ExPASy TrEMBL
Match: A0A5D3BCS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00490 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 3.53e-62
Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNS-GGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHYEKLNS GGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of CsGy2G005225 vs. ExPASy TrEMBL
Match: A0A7J7H3I9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.88e-13
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60
           MG  ++  +GGR W   Y++L S    +V V  RRRWV +M  + +KGFRL +  RL   
Sbjct: 1   MGFEDV--VGGR-WTTRYKRLTSNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRL--- 60

Query: 61  FGLKVSFLMSLSRRIR----EIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
              K   ++ L RR+     E+V+RMK  +++CP IIFS QWGLPVLS+
Sbjct: 61  -NWKAFSIVMLPRRMAQIYAEVVNRMKT-DEICPAIIFSGQWGLPVLSH 100

BLAST of CsGy2G005225 vs. ExPASy TrEMBL
Match: A0A061F3B0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.57e-12
Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 9   IGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSSFGLKVSFL 68
           +GG    C YEKL + G  R     RRRWVKKM   G+KG RL R  +LK+     V F 
Sbjct: 10  LGGHPVPCRYEKLRNVGDARP----RRRWVKKM-SGGLKGLRLSRSRKLKTL--CSVVFA 69

Query: 69  MSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
             ++R   +I  R+K+   +CPNIIF+T WGLP LS+
Sbjct: 70  NRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

BLAST of CsGy2G005225 vs. ExPASy TrEMBL
Match: A0A6A4KLK9 (SHSP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_21367 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.87e-12
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0

Query: 4   LEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLK-SSFG 63
           +EI+ + G RW   YEKL      +     RRRW  KM  R  +G RL R  +L   +F 
Sbjct: 128 IEISDVVGGRWRIRYEKLTGIDHEKAAARPRRRWAMKMNGR-FRGIRLPRCRKLNWRAFA 187

Query: 64  LKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSY 105
           + +S    ++    EI++RMK+++D+CP I+FS  WGLPVLS+
Sbjct: 188 ILMSP-KRIAEMYGEIINRMKMMDDICPGIVFSGHWGLPVLSH 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN61039.17.20e-6899.06hypothetical protein Csa_021124 [Cucumis sativus][more]
KAA0056096.17.28e-6290.00hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ9642... [more]
KAG6599155.15.32e-3270.48Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia][more]
KAF5946811.11.42e-1243.12hypothetical protein HYC85_017039 [Camellia sinensis][more]
EOY11805.13.24e-1245.36Uncharacterized protein TCM_026865 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
A0A0A0LJ293.49e-6899.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1[more]
A0A5D3BCS33.53e-6290.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J7H3I96.88e-1343.12Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1[more]
A0A061F3B01.57e-1245.36Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1[more]
A0A6A4KLK91.87e-1239.81SHSP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=26292... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35123OS07G0633900 PROTEIN-RELATEDcoord: 10..105
NoneNo IPR availablePANTHERPTHR35123:SF3OS07G0633900 PROTEINcoord: 10..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G005225.1CsGy2G005225.1mRNA