CsGy2G004400 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G004400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein RALF-like 33
Location	Gy14Chr2: 3058270 .. 3058635 (+)
RNA-Seq Expression	CsGy2G004400
Synteny	CsGy2G004400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGA

mRNA sequence

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGA

Coding sequence (CDS)

ATGGCAATGGCCGGATTCAATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTCTTATCTTCAGCTGTTCCTCAACCACCGTCCACGCCGGTCTAGGGATCCAACACAGTCTTGCATGGATTCCTAATCAATCTACCTGTAAGGGCTCCATAGCGGAGTGTTTCGGGGGAGAGGAGTTCGAATTTGATTCAGAAATCAACCGCCGTATCTTGGCAACTAGCCAGTACATCAGCTACGGCGCTCTACGAAGGAACAACGTGCCGTGCTCAAGACGTGGTGCATCTTATTACAATTGTCAGCCCGGAGCTCAGGCCAATCCCTATAGCCGTGGATGCAACGCCATTACGAGGTGCAGGAGTTGA

Protein sequence

MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEEFEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS*

Homology

[Close]

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-31
Identity = 69/99 (69.70%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 28  TVH---AGLGIQHSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYG 87
           TVH   A +  Q S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYG
Sbjct: 17  TVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYG 76

Query: 88  ALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           ALRRN VPCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 77  ALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-30
Identity = 72/116 (62.07%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 10  TFFLICAAVFLIFSCSSTTVHAGLGIQ-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL    + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29
Identity = 69/117 (58.97%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 9   PTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWI-PNQS--TCKGSIAECFG-GEEFEFD 68
           P+  ++C  +   F        A  G   +  W+ P +S   CKGSI EC    EEFE D
Sbjct: 4   PSGLILCVLIGAFFISM-----AAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELD 63

Query: 69  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           SE NRRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPYSRGC+AITRCRS
Sbjct: 64  SESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-28
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27
Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 7   NSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQ-STCKGSIAECFG-GEEFEFD 66
           N+   + + A + ++ S   +T   G  +    A   +  S C GSIAEC    EE EFD
Sbjct: 3   NTRAIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFD 62

Query: 67  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           S+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GAQANPYSRGC+ ITRCR
Sbjct: 63  SDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of CsGy2G004400 vs. NCBI nr
Match: KGN60987.2 (hypothetical protein Csa_021272 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 3.25e-82
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITR 118

[Close]

BLAST of CsGy2G004400 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 243 bits (621), Expect = 4.06e-81
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLICAAVF+IFSCSST VHAGLGI HSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFVIFSCSSTAVHAGLGIHHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. NCBI nr
Match: KAA0048028.1 (Rapid ALkalinization Factor [Cucumis melo var. makuwa] >TYK13791.1 Rapid ALkalinization Factor [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (621), Expect = 4.06e-81
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLI AAVFLIFSCSST VHAG+GIQ+SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 236 bits (601), Expect = 4.56e-78
Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGIQHSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (596), Expect = 2.64e-77
Identity = 110/121 (90.91%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1)

HSP 1 Score: 253 bits (645), Expect = 4.28e-85
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1)

HSP 1 Score: 243 bits (621), Expect = 1.96e-81
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNSPTFFLI AAVFLIFSCSST VHAG+GIQ+SLAWIPNQSTCKGSIAECFGGEE
Sbjct: 1   MAMAGFNSPTFFLISAAVFLIFSCSSTAVHAGIGIQNSLAWIPNQSTCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR
Sbjct: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 2.21e-78
Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGIQHSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1)

HSP 1 Score: 234 bits (596), Expect = 1.28e-77
Identity = 110/121 (90.91%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGFNS TFFLICAAVF++FSCSST VH GLGI HSL WIPNQSTCKG+IAECFGGEE
Sbjct: 1   MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIHHSLGWIPNQSTCKGTIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGALRRN VPCSRRGASYYNCQPGAQANPYSRGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1)

HSP 1 Score: 224 bits (570), Expect = 1.14e-73
Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MAMAGFNSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQSTCKGSIAECFGGEE 60
           MAMAGF+SPTF LICAAVF++F+CSST VH GLGI HSLAWIP+QS+CKGSIAECFGGEE
Sbjct: 1   MAMAGFHSPTF-LICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEE 60

Query: 61  FEFDSEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 120
           FEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNCQPGAQANPY RGC+AITRCR
Sbjct: 61  FEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR 120

[Close]

BLAST of CsGy2G004400 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 135.2 bits (339), Expect = 3.6e-32
Identity = 69/99 (69.70%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 28  TVH---AGLGIQHSLAWIPNQSTCKGSIAEC---FGGEEFEFDSEINRRILATSQYISYG 87
           TVH   A +  Q S  ++P +S C G+IAEC      EEFE DSEINRRILAT++YISYG
Sbjct: 17  TVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKYISYG 76

Query: 88  ALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           ALRRN VPCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 77  ALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CsGy2G004400 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 72/116 (62.07%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 10  TFFLICAAVFLIFSCSSTTVHAGLGIQ-HSLAWI---PNQSTCKGSIAECFGGEEFEFDS 69
           T FL    + ++F  SS  V AG       +AW     N S C GSIAEC G EE E DS
Sbjct: 6   TLFL-TLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDS 65

Query: 70  EINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCRS 122
           EINRRILAT++YISY +L+RN+VPCSRRGASYYNCQ GAQANPYSRGC+ I RCRS
Sbjct: 66  EINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of CsGy2G004400 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 127.1 bits (318), Expect = 9.7e-30
Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 43  PNQSTCKGSIAEC-------------FG----GEEFEFDSEINRRILATSQYISYGALRR 102
           P ++ C+G+IAEC             +G    GEEFE DSEINRRILAT +YISYGALRR
Sbjct: 42  PFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRR 101

Query: 103 NNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           N +PCSRRGASYYNC+ GAQANPYSRGC+AITRCR
Sbjct: 102 NTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136

[Close]

BLAST of CsGy2G004400 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 65/116 (56.03%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 7   NSPTFFLICAAVFLIFSCSSTTVHAGLGIQHSLAWIPNQ-STCKGSIAECFG-GEEFEFD 66
           N+   + + A + ++ S   +T   G  +    A   +  S C GSIAEC    EE EFD
Sbjct: 3   NTRAIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFD 62

Query: 67  SEINRRILATSQYISYGALRRNNVPCSRRGASYYNCQPGAQANPYSRGCNAITRCR 121
           S+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNCQ GAQANPYSRGC+ ITRCR
Sbjct: 63  SDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of CsGy2G004400 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 41  WIPNQSTCKGSIAECFG--GE-EFEFDSEINRRILATSQ-YISYGALRRNNVPCSRRGAS 100
           W   +S   G    C G  GE ++  DSE NRR LA  + YISYGALR+NNVPCSRRG S
Sbjct: 25  WTLTKSCVNGQ--GCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRS 84

Query: 101 YYNCQPGAQANPYSRGCNAITRC 120
           YY+C+   +ANPY RGC+ IT C
Sbjct: 85  YYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of CsGy2G004400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	5.0e-31	69.70	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9SRY3	1.5e-30	62.07	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q945T0	3.6e-29	58.97	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9LUS7	1.4e-28	66.32	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q9MA62	1.5e-27	56.03	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CsGy2G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60987.2	3.25e-82	100.00	hypothetical protein Csa_021272 [Cucumis sativus]	[more]
XP_038889183.1	4.06e-81	95.87	protein RALF-like 33 [Benincasa hispida]	[more]
KAA0048028.1	4.06e-81	96.69	Rapid ALkalinization Factor [Cucumis melo var. makuwa] >TYK13791.1 Rapid ALkalin...	[more]
XP_022937540.1	4.56e-78	91.74	protein RALF-like 33 [Cucurbita moschata]	[more]
XP_022966015.1	2.64e-77	90.91	protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cu...	[more]

BLAST of CsGy2G004400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFW9	4.28e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1	[more]
A0A5A7TYI2	1.96e-81	96.69	Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FH12	2.21e-78	91.74	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1	[more]
A0A6J1HQE4	1.28e-77	90.91	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1	[more]
A0A6J1DA82	1.14e-73	87.60	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1	[more]

BLAST of CsGy2G004400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	3.6e-32	69.70	ralf-like 33	[more]
AT1G02900.1	1.0e-31	62.07	rapid alkalinization factor 1	[more]
AT3G16570.1	9.7e-30	66.32	rapid alkalinization factor 23	[more]
AT3G05490.1	1.1e-28	56.03	ralf-like 22	[more]
AT2G33775.1	4.2e-17	55.42	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 59..120 e-value: 5.3E-30 score: 104.2
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 6..121
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 6..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G004400.2	CsGy2G004400.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region