CsGy2G003675 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGACTTCATCAAGATTGGCAATCTTGTTTATGGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTCTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTGGAAATATATTTGGCTGGTAAGCTTCATTTGTTTGGTCATGGAAGTAAGATCATTGTAACAACGAGAGACACATATTTGATTTCCAAATTCGACAAACTGTATCTTCTCCAAGGATTGAGCTGTGACAAAGCCCTTGAGATTTTTAGTTGGCATGCTTTTAAGAAAATTATCAGTGTAATATAA ATGGGTGACTTCATCAAGATTGGCAATCTTGTTTATGGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTCTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTGGAAATATATTTGGCTGGTAAGCTTCATTTGTTTGGTCATGGAAGTAAGATCATTGTAACAACGAGAGACACATATTTGATTTCCAAATTCGACAAACTGTATCTTCTCCAAGGATTGAGCTGTGACAAAGCCCTTGAGATTTTTAGTTGGCATGCTTTTAAGAAAATTATCAGTGTAATATAA ATGGGTGACTTCATCAAGATTGGCAATCTTGTTTATGGAAACACCAACATTATAAGGGATAGATTACACTCAAAAAGAATTCTTCTAGTTCTTGATGATATTGATGACTACAAGCAGCTGGAAATATATTTGGCTGGTAAGCTTCATTTGTTTGGTCATGGAAGTAAGATCATTGTAACAACGAGAGACACATATTTGATTTCCAAATTCGACAAACTGTATCTTCTCCAAGGATTGAGCTGTGACAAAGCCCTTGAGATTTTTAGTTGGCATGCTTTTAAGAAAATTATCAGTGTAATATAA MGDFIKIGNLVYGNTNIIRDRLHSKRILLVLDDIDDYKQLEIYLAGKLHLFGHGSKIIVTTRDTYLISKFDKLYLLQGLSCDKALEIFSWHAFKKIISVI* Homology
BLAST of CsGy2G003675 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.0e-13 Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 36/82 (43.90%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.6e-12 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-10 Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-09 Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of CsGy2G003675 vs. NCBI nr
Match: XP_038877735.1 (disease resistance protein RPS6-like, partial [Benincasa hispida]) HSP 1 Score: 105 bits (262), Expect = 8.12e-24 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of CsGy2G003675 vs. NCBI nr
Match: AOY34357.1 (NBS-LRR protein, partial [Benincasa hispida]) HSP 1 Score: 98.6 bits (244), Expect = 1.81e-23 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CsGy2G003675 vs. NCBI nr
Match: AOY34350.1 (NBS-LRR protein, partial [Benincasa hispida] >AOY34361.1 NBS-LRR protein, partial [Benincasa hispida]) HSP 1 Score: 98.6 bits (244), Expect = 1.81e-23 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CsGy2G003675 vs. NCBI nr
Match: KAA0063681.1 (putative TIR-NBS-LRR-AAA+ATPase [Cucumis melo var. makuwa] >TYK18346.1 putative TIR-NBS-LRR-AAA+ATPase [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 1.59e-22 Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsGy2G003675 vs. NCBI nr
Match: XP_031736894.1 (TMV resistance protein N [Cucumis sativus]) HSP 1 Score: 101 bits (252), Expect = 1.82e-22 Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy TrEMBL
Match: A0A1D9CF69 (NBS-LRR protein (Fragment) OS=Benincasa hispida OX=102211 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.77e-24 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy TrEMBL
Match: A0A1D9CFH0 (NBS-LRR protein (Fragment) OS=Benincasa hispida OX=102211 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.77e-24 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy TrEMBL
Match: A0A5A7VD65 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00610 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 7.72e-23 Identity = 51/95 (53.68%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy TrEMBL
Match: A0A0A0LLK3 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020890 PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 8.83e-23 Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0
BLAST of CsGy2G003675 vs. ExPASy TrEMBL
Match: I3RTG4 (Disease resistance-like protein DRP-03 (Fragment) OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.89e-22 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of CsGy2G003675 vs. TAIR 10
Match: AT5G36930.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13 Identity = 37/97 (38.14%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CsGy2G003675 vs. TAIR 10
Match: AT5G36930.2 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13 Identity = 37/97 (38.14%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CsGy2G003675 vs. TAIR 10
Match: AT5G41740.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of CsGy2G003675 vs. TAIR 10
Match: AT5G41740.2 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of CsGy2G003675 vs. TAIR 10
Match: AT4G14370.1 (Disease resistance protein (TIR-NBS-LRR class) family ) HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|