CsGy2G002032 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G002032
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptiondisease resistance protein RGA2-like
LocationGy14Chr2: 1375286 .. 1375588 (-)
RNA-Seq ExpressionCsGy2G002032
SyntenyCsGy2G002032
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGTTTAAGGCATTTGGAATTTTCACTTGAAGATAGTGATGTATCCCCCGCATTAGAAATGCCTTTATATTTGAGTGAATTAACTCAACTTCAAACGTTGTCTGCTTTTGTAGTAGGATTGAAGAAGGGTTGTATGATTACAGAACTGGGGAGTCTAAGAAAGCTGAAAGGTTTGTTGGTGATGCTATGTTTAGAACATGTTGAAAGTAAAGAGGAAGCCAAGAGTGCAAAATTGGTGGAAAAAGAGAAGGTAGAAGAACTACACTTTGTGTGGAGTACGGAAAGCCATAGAATATAG

mRNA sequence

ATGGTTAGTTTAAGGCATTTGGAATTTTCACTTGAAGATAGTGATGTATCCCCCGCATTAGAAATGCCTTTATATTTGAGTGAATTAACTCAACTTCAAACGTTGTCTGCTTTTGTAGTAGGATTGAAGAAGGGTTGTATGATTACAGAACTGGGGAGTCTAAGAAAGCTGAAAGGTTTGTTGGTGATGCTATGTTTAGAACATGTTGAAAGTAAAGAGGAAGCCAAGAGTGCAAAATTGGTGGAAAAAGAGAAGGTAGAAGAACTACACTTTGTGTGGAGTACGGAAAGCCATAGAATATAG

Coding sequence (CDS)

ATGGTTAGTTTAAGGCATTTGGAATTTTCACTTGAAGATAGTGATGTATCCCCCGCATTAGAAATGCCTTTATATTTGAGTGAATTAACTCAACTTCAAACGTTGTCTGCTTTTGTAGTAGGATTGAAGAAGGGTTGTATGATTACAGAACTGGGGAGTCTAAGAAAGCTGAAAGGTTTGTTGGTGATGCTATGTTTAGAACATGTTGAAAGTAAAGAGGAAGCCAAGAGTGCAAAATTGGTGGAAAAAGAGAAGGTAGAAGAACTACACTTTGTGTGGAGTACGGAAAGCCATAGAATATAG

Protein sequence

MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGLLVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTESHRI*
Homology
BLAST of CsGy2G002032 vs. ExPASy Swiss-Prot
Match: Q9LRR4 (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.9e-05
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0

Query: 21  EMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGLLVMLCLEHVESKEEAKSAKL 80
           +MP     L  LQTL+ F V    G  I+ELG L  L G L ++ L+ V    +A  A L
Sbjct: 663 QMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANL 722

Query: 81  VEKEKVEELHFVWSTES 98
             K+ + E+ FVW T S
Sbjct: 723 NSKKHLREIDFVWRTGS 739

BLAST of CsGy2G002032 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.6e-04
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 0

Query: 22  MPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGLLVMLCLEHVESKEEAKSAKLV 81
           MP  +  LT L+TL  FVVG KKG  + ELG+L  L G + +  LE V++ ++AK A L 
Sbjct: 612 MPPRIGSLTCLKTLGQFVVGRKKGYQLGELGNL-NLYGSIKISHLERVKNDKDAKEANLS 671

Query: 82  EKEKVEELHFVWS 95
            K  +  L   W+
Sbjct: 672 AKGNLHSLSMSWN 683

BLAST of CsGy2G002032 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 9.6e-04
Identity = 35/93 (37.63%), Postives = 48/93 (51.61%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           + SLR+L       D  P   MP  +  LT L+TL  FVVG +KG  + EL +L  L+G 
Sbjct: 604 LCSLRNLVL-----DHCPLTSMPPRIGLLTCLKTLGYFVVGERKGYQLGELRNL-NLRGA 663

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVW 94
           + +  LE V++  EAK A L  K  +  L   W
Sbjct: 664 ISITHLERVKNDMEAKEANLSAKANLHSLSMSW 690

BLAST of CsGy2G002032 vs. NCBI nr
Match: XP_011650061.1 (putative disease resistance protein RGA3 [Cucumis sativus] >KGN63368.1 hypothetical protein Csa_022194 [Cucumis sativus])

HSP 1 Score: 113 bits (282), Expect = 1.60e-26
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           M+SLRHLEFS  D  +SP      YLS+L QL+TL  F VG +KGC ITELG LR LKGL
Sbjct: 627 MISLRHLEFSSIDKQMSP------YLSQLIQLETLPKFAVGFEKGCKITELGVLRNLKGL 686

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTESHR 99
           L +  LEHVESKEEA++AKLVEKE +EE+HFVW+ E  R
Sbjct: 687 LKLQRLEHVESKEEAETAKLVEKENLEEVHFVWTKERKR 719

BLAST of CsGy2G002032 vs. NCBI nr
Match: KAE8651535.1 (hypothetical protein Csa_019319 [Cucumis sativus])

HSP 1 Score: 108 bits (270), Expect = 6.15e-25
Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           MVSLRHLE  L   D+ P  EMP YLSEL QLQTL AF VG + G  I+ELG LR LKGL
Sbjct: 529 MVSLRHLEILLMGIDLPPKFEMPPYLSELVQLQTLFAFAVGFETGRKISELGGLRNLKGL 588

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVW 93
           L +  LEHVESKEEAK+AKLVEKEKVE L+  W
Sbjct: 589 LKLHRLEHVESKEEAKAAKLVEKEKVEGLNLSW 621

BLAST of CsGy2G002032 vs. NCBI nr
Match: XP_022152034.1 (disease resistance protein RGA2-like [Momordica charantia])

HSP 1 Score: 101 bits (251), Expect = 2.45e-22
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           +VSLRHLEFS+ +   +   +MP YLS+LT+LQTLS FVVG +KGC ITELG L+ LKG 
Sbjct: 373 LVSLRHLEFSMNNFVAN---KMPPYLSKLTKLQTLSNFVVGYEKGCKITELGFLKNLKGS 432

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVW 93
           L + CLE V+SKEEA SAKLV+KE ++ L F W
Sbjct: 433 LKLYCLEQVKSKEEASSAKLVDKENLDSLAFHW 462

BLAST of CsGy2G002032 vs. NCBI nr
Match: XP_022145104.1 (disease resistance protein RGA2-like [Momordica charantia])

HSP 1 Score: 94.4 bits (233), Expect = 6.63e-20
Identity = 55/95 (57.89%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           MVSLRHLEF L+    S   +MP ++SEL  LQTLS FV G + GC I ELG L+ LKG 
Sbjct: 617 MVSLRHLEFELK----SDFRQMPSHMSELIHLQTLSRFVAGFENGCKIEELGPLKNLKGK 676

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWST 95
           L + CLE VESKEE+  AKLVEK+ ++EL F WS+
Sbjct: 677 LQLSCLERVESKEESIVAKLVEKKNLQELIFEWSS 707

BLAST of CsGy2G002032 vs. NCBI nr
Match: XP_011650071.2 (disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical protein Csa_021786 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 6.64e-20
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           +VSLRHL+     S+V    + P +LS+LTQLQTLS FV+G ++GC ITELG L+ L+G 
Sbjct: 644 LVSLRHLKLW---SNVD---QTPPHLSQLTQLQTLSHFVIGFEEGCKITELGPLKNLQGC 703

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTE 96
           L +LCLE VESKEEA    L EKEK+++LH  WS E
Sbjct: 704 LSLLCLEKVESKEEANGTNLAEKEKLKDLHLSWSNE 733

BLAST of CsGy2G002032 vs. ExPASy TrEMBL
Match: A0A0A0LJ04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008000 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 2.85e-29
Identity = 68/94 (72.34%), Postives = 73/94 (77.66%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           MVSLRHLE  L   D+ P  EMP YLSEL QLQTL AF VG + G  I+ELG LR LKGL
Sbjct: 529 MVSLRHLEILLMGIDLPPKFEMPPYLSELVQLQTLFAFAVGFETGRKISELGGLRNLKGL 588

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWS 94
           L +  LEHVESKEEAK+AKLVEKEKVEELHFVWS
Sbjct: 589 LKLHRLEHVESKEEAKAAKLVEKEKVEELHFVWS 622

BLAST of CsGy2G002032 vs. ExPASy TrEMBL
Match: A0A0A0LNG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433340 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 7.74e-27
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           M+SLRHLEFS  D  +SP      YLS+L QL+TL  F VG +KGC ITELG LR LKGL
Sbjct: 627 MISLRHLEFSSIDKQMSP------YLSQLIQLETLPKFAVGFEKGCKITELGVLRNLKGL 686

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTESHR 99
           L +  LEHVESKEEA++AKLVEKE +EE+HFVW+ E  R
Sbjct: 687 LKLQRLEHVESKEEAETAKLVEKENLEEVHFVWTKERKR 719

BLAST of CsGy2G002032 vs. ExPASy TrEMBL
Match: A0A6J1DEU3 (disease resistance protein RGA2-like OS=Momordica charantia OX=3673 GN=LOC111019843 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 1.19e-22
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           +VSLRHLEFS+ +   +   +MP YLS+LT+LQTLS FVVG +KGC ITELG L+ LKG 
Sbjct: 373 LVSLRHLEFSMNNFVAN---KMPPYLSKLTKLQTLSNFVVGYEKGCKITELGFLKNLKGS 432

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVW 93
           L + CLE V+SKEEA SAKLV+KE ++ L F W
Sbjct: 433 LKLYCLEQVKSKEEASSAKLVDKENLDSLAFHW 462

BLAST of CsGy2G002032 vs. ExPASy TrEMBL
Match: A0A0A0LN83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432820 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.50e-21
Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 1  MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
          + SLRHLE  +         + PL+LS LTQLQ LS FVVG +KGC ITELG L+ L+G 
Sbjct: 6  LASLRHLELWVSSD------KTPLHLSRLTQLQILSHFVVGFEKGCKITELGRLKNLQGS 65

Query: 61 LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTE 96
          L +LC E VESKEEA  A L EKE ++ELH  W  E
Sbjct: 66 LSLLCSEKVESKEEANGANLAEKENLKELHLNWDME 95

BLAST of CsGy2G002032 vs. ExPASy TrEMBL
Match: A0A0A0LRE1 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G435460 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.19e-20
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 0

Query: 1   MVSLRHLEFSLEDSDVSPALEMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGL 60
           +VSLRHL+     S+V    + P +LS+LTQLQTLS FV+G ++GC ITELG L+ L+G 
Sbjct: 480 LVSLRHLKLW---SNVD---QTPPHLSQLTQLQTLSHFVIGFEEGCKITELGPLKNLQGC 539

Query: 61  LVMLCLEHVESKEEAKSAKLVEKEKVEELHFVWSTE 96
           L +LCLE VESKEEA    L EKEK+++LH  WS E
Sbjct: 540 LSLLCLEKVESKEEANGTNLAEKEKLKDLHLSWSNE 569

BLAST of CsGy2G002032 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 48.9 bits (115), Expect = 2.8e-06
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0

Query: 21  EMPLYLSELTQLQTLSAFVVGLKKGCMITELGSLRKLKGLLVMLCLEHVESKEEAKSAKL 80
           +MP     L  LQTL+ F V    G  I+ELG L  L G L ++ L+ V    +A  A L
Sbjct: 663 QMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANL 722

Query: 81  VEKEKVEELHFVWSTES 98
             K+ + E+ FVW T S
Sbjct: 723 NSKKHLREIDFVWRTGS 739

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LRR43.9e-0538.96Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702... [more]
Q7XBQ95.6e-0441.10Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ... [more]
Q7XA409.6e-0437.63Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R... [more]
Match NameE-valueIdentityDescription
XP_011650061.11.60e-2663.64putative disease resistance protein RGA3 [Cucumis sativus] >KGN63368.1 hypotheti... [more]
KAE8651535.16.15e-2567.74hypothetical protein Csa_019319 [Cucumis sativus][more]
XP_022152034.12.45e-2261.29disease resistance protein RGA2-like [Momordica charantia][more]
XP_022145104.16.63e-2057.89disease resistance protein RGA2-like [Momordica charantia][more]
XP_011650071.26.64e-2056.25disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical pro... [more]
Match NameE-valueIdentityDescription
A0A0A0LJ042.85e-2972.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008000 PE=4 SV=1[more]
A0A0A0LNG87.74e-2763.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G433340 PE=4 SV=1[more]
A0A6J1DEU31.19e-2261.29disease resistance protein RGA2-like OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A0A0LN838.50e-2155.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432820 PE=4 SV=1[more]
A0A0A0LRE13.19e-2056.25NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G435460 PE=4... [more]
Match NameE-valueIdentityDescription
AT3G14470.12.8e-0638.96NB-ARC domain-containing disease resistance protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G002032.1CsGy2G002032.1mRNA