CsGy2G001770 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G001770
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Cytochrome P450 family protein
Location	Gy14Chr2: 1211383 .. 1212061 (+)
RNA-Seq Expression	CsGy2G001770
Synteny	CsGy2G001770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATAAACTTTCTTCTTCTTCAATTGTCTCATTCATCCATTAAACTAATTTCTTCTCCTCACTTTCTTTTTCTCCCTCTCTTAAGCCAATAATTATTACAACCAAATCAATGTCTTCTTCAATCTTGAGCTCCCAATCCATGGCTATGGCTTTCGCCGGCACTGTCATCGTCGTTCTTTCTTTCTACCTTCATAAATCCCACCCCTCAATTTCTTCCGGTAAGCAAATTCAATTAATTCCATTTTTCATAAAGAAAAACAAAACAAGAAATCTATTTTTATTTTTATTTTTTTTGGGTTTTCTTTTCTTCAAGTGATGAAGAAGAAAGAGAAGGAGAAGAAGAAAAAAGGACGAAAAAAAGTTCATTTTTCTGACGATTTAGCCATTTTCAGTAGTACTAAAGACTTGAAGAGAAAAAAAGACATGATGTTGGGTTCATCGCCACCCTCGGGAAGAGCCCCGGCACGGCCGTTGACGACCAGCGGTGGAGGAGGCGGCGGATTGCCGGCAAATAGAGCGGCACTGTACAATGGAATCTTAAGGAATCGTTTGGTTCATAGAATAGCATATTCTCTTTAATTTTTCTTTTTCTTTTTCTTTTTTTTCTCTCTTGGTCAAGAAAAAATGTACATTGATGTGTAAATTCAAATTAAAAAATCTCCACTTGTGTAGTAATAAT

mRNA sequence

CAATAAACTTTCTTCTTCTTCAATTGTCTCATTCATCCATTAAACTAATTTCTTCTCCTCACTTTCTTTTTCTCCCTCTCTTAAGCCAATAATTATTACAACCAAATCAATGTCTTCTTCAATCTTGAGCTCCCAATCCATGGCTATGGCTTTCGCCGGCACTGTCATCGTCGTTCTTTCTTTCTACCTTCATAAATCCCACCCCTCAATTTCTTCCGTGATGAAGAAGAAAGAGAAGGAGAAGAAGAAAAAAGGACGAAAAAAAGTTCATTTTTCTGACGATTTAGCCATTTTCAGTAGTACTAAAGACTTGAAGAGAAAAAAAGACATGATGTTGGGTTCATCGCCACCCTCGGGAAGAGCCCCGGCACGGCCGTTGACGACCAGCGGTGGAGGAGGCGGCGGATTGCCGGCAAATAGAGCGGCACTGTACAATGGAATCTTAAGGAATCGTTTGGTTCATAGAATAGCATATTCTCTTTAATTTTTCTTTTTCTTTTTCTTTTTTTTCTCTCTTGGTCAAGAAAAAATGTACATTGATGTGTAAATTCAAATTAAAAAATCTCCACTTGTGTAGTAATAAT

Coding sequence (CDS)

ATGTCTTCTTCAATCTTGAGCTCCCAATCCATGGCTATGGCTTTCGCCGGCACTGTCATCGTCGTTCTTTCTTTCTACCTTCATAAATCCCACCCCTCAATTTCTTCCGTGATGAAGAAGAAAGAGAAGGAGAAGAAGAAAAAAGGACGAAAAAAAGTTCATTTTTCTGACGATTTAGCCATTTTCAGTAGTACTAAAGACTTGAAGAGAAAAAAAGACATGATGTTGGGTTCATCGCCACCCTCGGGAAGAGCCCCGGCACGGCCGTTGACGACCAGCGGTGGAGGAGGCGGCGGATTGCCGGCAAATAGAGCGGCACTGTACAATGGAATCTTAAGGAATCGTTTGGTTCATAGAATAGCATATTCTCTTTAA

Protein sequence

MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRIAYSL*

Homology

[Close]

BLAST of CsGy2G001770 vs. NCBI nr
Match: KGN60682.1 (hypothetical protein Csa_019276 [Cucumis sativus])

HSP 1 Score: 230 bits (587), Expect = 7.78e-76
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA 60
           MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA
Sbjct: 1   MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA 60

Query: 61  IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI 120
           IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI
Sbjct: 61  IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI 120

Query: 121 AYSL 124
           AYSL
Sbjct: 121 AYSL 124

[Close]

BLAST of CsGy2G001770 vs. NCBI nr
Match: XP_008457539.1 (PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo])

HSP 1 Score: 192 bits (487), Expect = 1.61e-60
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 2   SSSILSSQSMAMAFA----GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSD 61
           SSSILSSQSMAMAFA    GTVIVVLS YLHKSHPSISSV++KKE EKKKKGRK+VHFSD
Sbjct: 3   SSSILSSQSMAMAFAALSAGTVIVVLSLYLHKSHPSISSVVEKKEMEKKKKGRKRVHFSD 62

Query: 62  DLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLV 121
           DLAIFSST++LKRKKDM+LGSSP  GRA AR LT +GGGGGG+PANRAALYNGILR+RLV
Sbjct: 63  DLAIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDRLV 122

Query: 122 HRIAYSL 124
           HRIAYSL
Sbjct: 123 HRIAYSL 129

[Close]

BLAST of CsGy2G001770 vs. NCBI nr
Match: XP_038890799.1 (uncharacterized protein LOC120080255 [Benincasa hispida])

HSP 1 Score: 177 bits (448), Expect = 1.28e-54
Identity = 100/127 (78.74%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MSSSILSSQSMAMAFA---GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSD 60
           MSSSILSSQSMAMAFA   GTVIV+LSF LHKS PSISSV+KKKE EKKKKGRK+VHF+D
Sbjct: 1   MSSSILSSQSMAMAFAALSGTVIVILSFCLHKSDPSISSVVKKKEMEKKKKGRKRVHFAD 60

Query: 61  DLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLV 120
           DLAIF  T++L+ KK ++LGSSPP GR PAR LT++GGGGGG+PANR ALYNGILR+RLV
Sbjct: 61  DLAIFG-TEELQIKKGLILGSSPPPGRGPARRLTSTGGGGGGMPANRVALYNGILRDRLV 120

Query: 121 HRIAYSL 124
           HRIAYSL
Sbjct: 121 HRIAYSL 126

[Close]

BLAST of CsGy2G001770 vs. NCBI nr
Match: KAA0061609.1 (uncharacterized protein E6C27_scaffold41G001740 [Cucumis melo var. makuwa] >TYJ97819.1 uncharacterized protein E5676_scaffold285G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 4.26e-42
Identity = 88/127 (69.29%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 2   SSSILSSQSMAMAFA----GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSD 61
           SSSILSSQSMAMAFA    GTVIVVLS YLHKSHPSISS                     
Sbjct: 3   SSSILSSQSMAMAFAALSAGTVIVVLSLYLHKSHPSISS--------------------- 62

Query: 62  DLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLV 121
             AIFSST++LKRKKDM+LGSSP  GRA AR LT +GGGGGG+PANRAALYNGILR+RLV
Sbjct: 63  --AIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDRLV 106

Query: 122 HRIAYSL 124
           HRIAYSL
Sbjct: 123 HRIAYSL 106

[Close]

BLAST of CsGy2G001770 vs. NCBI nr
Match: XP_022946911.1 (uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata])

HSP 1 Score: 123 bits (308), Expect = 1.64e-33
Identity = 74/117 (63.25%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 11  MAMAFA---GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLAIFSSTKD 70
           MAMA A   G V VVLSF   KS  S+SSV+KKK     KKGRK+VHF+DD A+ S T++
Sbjct: 1   MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKK-----KKGRKRVHFADDSAVCS-TEE 60

Query: 71  LKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRIAYSL 124
           L+RK  ++LG SPP GRAP   LT+ GGGG G+PANR ALYNGILR+RLVHR+AYSL
Sbjct: 61  LQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL 111

[Close]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL
Match: A0A0A0LIY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1)

HSP 1 Score: 230 bits (587), Expect = 3.77e-76
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA 60
           MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA
Sbjct: 1   MSSSILSSQSMAMAFAGTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLA 60

Query: 61  IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI 120
           IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI
Sbjct: 61  IFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRI 120

Query: 121 AYSL 124
           AYSL
Sbjct: 121 AYSL 124

[Close]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL
Match: A0A1S3C5Q6 (uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 7.81e-61
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 2   SSSILSSQSMAMAFA----GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSD 61
           SSSILSSQSMAMAFA    GTVIVVLS YLHKSHPSISSV++KKE EKKKKGRK+VHFSD
Sbjct: 3   SSSILSSQSMAMAFAALSAGTVIVVLSLYLHKSHPSISSVVEKKEMEKKKKGRKRVHFSD 62

Query: 62  DLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLV 121
           DLAIFSST++LKRKKDM+LGSSP  GRA AR LT +GGGGGG+PANRAALYNGILR+RLV
Sbjct: 63  DLAIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDRLV 122

Query: 122 HRIAYSL 124
           HRIAYSL
Sbjct: 123 HRIAYSL 129

[Close]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL
Match: A0A5A7V7G5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00290 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.06e-42
Identity = 88/127 (69.29%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 2   SSSILSSQSMAMAFA----GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSD 61
           SSSILSSQSMAMAFA    GTVIVVLS YLHKSHPSISS                     
Sbjct: 3   SSSILSSQSMAMAFAALSAGTVIVVLSLYLHKSHPSISS--------------------- 62

Query: 62  DLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLV 121
             AIFSST++LKRKKDM+LGSSP  GRA AR LT +GGGGGG+PANRAALYNGILR+RLV
Sbjct: 63  --AIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDRLV 106

Query: 122 HRIAYSL 124
           HRIAYSL
Sbjct: 123 HRIAYSL 106

[Close]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL
Match: A0A6J1G4X1 (uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 7.92e-34
Identity = 74/117 (63.25%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 11  MAMAFA---GTVIVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVHFSDDLAIFSSTKD 70
           MAMA A   G V VVLSF   KS  S+SSV+KKK     KKGRK+VHF+DD A+ S T++
Sbjct: 1   MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKKK-----KKGRKRVHFADDSAVCS-TEE 60

Query: 71  LKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRIAYSL 124
           L+RK  ++LG SPP GRAP   LT+ GGGG G+PANR ALYNGILR+RLVHR+AYSL
Sbjct: 61  LQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL 111

[Close]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL
Match: A0A6J1G5C3 (uncharacterized protein LOC111450851 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 6.68e-32
Identity = 73/120 (60.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 11  MAMAFA---GTVIVVLSFYLHKSHPSISSVMKKKE---KEKKKKGRKKVHFSDDLAIFSS 70
           MAMA A   G V VVLSF   KS  S+SS  +K      +KKKKGRK+VHF+DD A+ S 
Sbjct: 1   MAMAMAALSGAVAVVLSFRHRKSAASVSSGKQKPPIFLVKKKKKGRKRVHFADDSAVCS- 60

Query: 71  TKDLKRKKDMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILRNRLVHRIAYSL 124
           T++L+RK  ++LG SPP GRAP   LT+ GGGG G+PANR ALYNGILR+RLVHR+AYSL
Sbjct: 61  TEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL 119

[Close]

BLAST of CsGy2G001770 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 32  PSISSVMKKKEKEKKKKGRKKVHFSDDLAIFSSTKDLKRKKDMMLGSSPPSGRAPARPLT 91
           P + S +  +E +K+ K  KKV F+D++       +  R++++   S P       +P+T
Sbjct: 46  PILRSCLSSEETKKQGKKIKKVRFADNVKDTKGNGEEYRRRELNRKSVP-------KPVT 105

Query: 92  TSGGGG-----GGLPANRAALYNGILRNRLVHRIAYS 124
             G  G       +PANR ALYNGILR+R  HR+ YS
Sbjct: 106 KPGKTGSMCRISTMPANRMALYNGILRDR-DHRVQYS 134

The following BLAST results are available for this feature:

BLAST of CsGy2G001770 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G001770 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60682.1	7.78e-76	100.00	hypothetical protein Csa_019276 [Cucumis sativus]	[more]
XP_008457539.1	1.61e-60	84.25	PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]	[more]
XP_038890799.1	1.28e-54	78.74	uncharacterized protein LOC120080255 [Benincasa hispida]	[more]
KAA0061609.1	4.26e-42	69.29	uncharacterized protein E6C27_scaffold41G001740 [Cucumis melo var. makuwa] >TYJ9...	[more]
XP_022946911.1	1.64e-33	63.25	uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]	[more]

BLAST of CsGy2G001770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIY8	3.77e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1	[more]
A0A1S3C5Q6	7.81e-61	84.25	uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=...	[more]
A0A5A7V7G5	2.06e-42	69.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G4X1	7.92e-34	63.25	uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G5C3	6.68e-32	60.83	uncharacterized protein LOC111450851 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsGy2G001770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15760.1	1.4e-04	35.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..99
None	No IPR available	PANTHER	PTHR33564:SF11	OS06G0604600 PROTEIN	coord: 3..123
None	No IPR available	PANTHER	PTHR33564	TRANSMEMBRANE PROTEIN	coord: 3..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G001770.1	CsGy2G001770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane